RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C ERG12P07277 443 aa6.57□□□□□ -1.36
SFB3YHR098C IES2P40154 320 aa6.57□□□□□ -1.36
SFB3YHR098C CWH41P53008 833 aa6.57□□□□□ -1.36
SFB3YHR098C RTT107P38850 1070 aa6.57□□□□□ -1.36
SFB3YHR098C BIM1P40013 344 aa6.57□□□□□ -1.36
SFB3YHR098C RSM25P40496 264 aa6.57□□□□□ -1.36
SFB3YHR098C HSP82P02829 709 aaKnown RBP6.56□□□□□ -1.36
SFB3YHR098C SRP54P20424 541 aaKnown RBP6.56□□□□□ -1.36
SFB3YHR098C MRPL10P36520 322 aa6.56□□□□□ -1.36
SFB3YHR098C BRN1P38170 754 aa6.56□□□□□ -1.36
SFB3YHR098C YGL082WP53155 381 aa6.56□□□□□ -1.36
SFB3YHR098C RAD50P12753 1312 aa6.56□□□□□ -1.36
SFB3YHR098C KEX1P09620 729 aa6.56□□□□□ -1.36
SFB3YHR098C VPS41P38959 992 aa6.56□□□□□ -1.36
SFB3YHR098C PRP31P49704 494 aaPredicted RBP6.56□□□□□ -1.36
SFB3YHR098C NNF2P53253 936 aa6.56□□□□□ -1.36
SFB3YHR098C NKP2Q06162 153 aa6.56□□□□□ -1.36
SFB3YHR098C TLG2Q08144 397 aa6.56□□□□□ -1.36
SFB3YHR098C SWH1P35845 1188 aa6.55□□□□□ -1.36
SFB3YHR098C YIL055CP40523 627 aaKnown RBP6.55□□□□□ -1.36
SFB3YHR098C VMR1P38735 1592 aa6.55□□□□□ -1.36
SFB3YHR098C PRD1P25375 712 aa6.55□□□□□ -1.36
SFB3YHR098C MSH1P25846 959 aa6.55□□□□□ -1.36
SFB3YHR098C ALD2P47771 506 aa6.55□□□□□ -1.36
SFB3YHR098C GCR2Q01722 534 aa6.55□□□□□ -1.36
SFB3YHR098C TRP5P00931 707 aaKnown RBP6.54□□□□□ -1.36
SFB3YHR098C MPE1P35728 441 aaKnown RBP6.54□□□□□ -1.36
SFB3YHR098C HXT13P39924 564 aa6.54□□□□□ -1.36
SFB3YHR098C YNL035CP53962 389 aaKnown RBP6.54□□□□□ -1.36
SFB3YHR098C RTT109Q07794 436 aa6.54□□□□□ -1.36
SFB3YHR098C YKL068W-AQ3E826 78 aa6.54□□□□□ -1.36
SFB3YHR098C DNF3Q12674 1656 aa6.54□□□□□ -1.36
SFB3YHR098C SES1P07284 462 aaKnown RBP6.54□□□□□ -1.36
SFB3YHR098C BIK1P11709 440 aa6.53□□□□□ -1.36
SFB3YHR098C ARP5P53946 755 aa6.53□□□□□ -1.36
SFB3YHR098C AI2P03876 854 aa6.53□□□□□ -1.36
SFB3YHR098C ALD4P46367 519 aaKnown RBP6.53□□□□□ -1.36
SFB3YHR098C VPS72Q03388 795 aa6.53□□□□□ -1.36
SFB3YHR098C MSB4Q12317 492 aa6.53□□□□□ -1.36
SFB3YHR098C YRF1-4O13559 1382 aa6.53□□□□□ -1.36
SFB3YHR098C SIR4P11978 1358 aa6.53□□□□□ -1.36
SFB3YHR098C YML133CQ03099 1374 aa6.53□□□□□ -1.36
SFB3YHR098C YLL067CQ07888 1374 aa6.53□□□□□ -1.36
SFB3YHR098C YLL066CQ99208 1374 aa6.53□□□□□ -1.36
SFB3YHR098C YJR008WP47085 338 aa6.52□□□□□ -1.37
SFB3YHR098C HXT17P53631 564 aa6.52□□□□□ -1.37
SFB3YHR098C GRX3Q03835 250 aa6.52□□□□□ -1.37
SFB3YHR098C KTR1P27810 393 aaKnown RBP6.52□□□□□ -1.37
SFB3YHR098C SWI3P32591 825 aa6.52□□□□□ -1.37
SFB3YHR098C SCT1P32784 759 aa6.52□□□□□ -1.37
SFB3YHR098C YAP3P38749 330 aa6.52□□□□□ -1.37
SFB3YHR098C MAK21Q12176 1025 aaKnown RBP6.52□□□□□ -1.37
SFB3YHR098C YML083CQ04526 418 aa6.52□□□□□ -1.37
SFB3YHR098C PLP2Q12017 286 aa6.52□□□□□ -1.37
SFB3YHR098C MET10P39692 1035 aa6.51□□□□□ -1.37
SFB3YHR098C TAN1P53072 289 aaPredicted RBP6.51□□□□□ -1.37
SFB3YHR098C GYL1Q04322 720 aa6.51□□□□□ -1.37
SFB3YHR098C PUS1Q12211 544 aaKnown RBP6.51□□□□□ -1.37
SFB3YHR098C DUR1,2P32528 1835 aaKnown RBP6.51□□□□□ -1.37
SFB3YHR098C LYS2P07702 1392 aa6.51□□□□□ -1.37
SFB3YHR098C AUS1Q08409 1394 aa6.51□□□□□ -1.37
SFB3YHR098C RPA190P10964 1664 aaKnown RBP6.5□□□□□ -1.37
SFB3YHR098C RAD51P25454 400 aa6.5□□□□□ -1.37
SFB3YHR098C MRC1P25588 1096 aa6.5□□□□□ -1.37
SFB3YHR098C HYR1P40581 163 aaKnown RBP6.5□□□□□ -1.37
SFB3YHR098C RFC1P38630 861 aaKnown RBP6.5□□□□□ -1.37
SFB3YHR098C GIN4Q12263 1142 aa6.5□□□□□ -1.37
SFB3YHR098C RNR2P09938 399 aaKnown RBP6.49□□□□□ -1.37
SFB3YHR098C MAK11P20484 414 aaKnown RBP6.49□□□□□ -1.37
SFB3YHR098C SPT5P27692 1063 aaKnown RBP6.49□□□□□ -1.37
SFB3YHR098C TFC8Q12308 588 aa6.49□□□□□ -1.37
SFB3YHR098C TRL1P09880 827 aaKnown RBP6.48□□□□□ -1.37
SFB3YHR098C ATE1P16639 503 aa6.48□□□□□ -1.37
SFB3YHR098C TTI1P36097 1038 aa6.48□□□□□ -1.37
SFB3YHR098C PEX19Q07418 342 aa6.48□□□□□ -1.37
SFB3YHR098C TRS33Q99394 268 aa6.48□□□□□ -1.37
SFB3YHR098C USO1P25386 1790 aa6.48□□□□□ -1.37
SFB3YHR098C TIF1P10081 395 aaKnown RBP6.48□□□□□ -1.37
SFB3YHR098C CPS1P27614 576 aa6.48□□□□□ -1.37
SFB3YHR098C IPL1P38991 367 aa6.48□□□□□ -1.37
SFB3YHR098C YMR1P47147 688 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
SFB3YHR098C CTI6Q08923 506 aa6.48□□□□□ -1.37
SFB3YHR098C YPL225WQ08971 146 aaKnown RBP6.48□□□□□ -1.37
SFB3YHR098C SEC39Q12745 709 aa6.48□□□□□ -1.37
SFB3YHR098C HEM3P28789 327 aa6.47□□□□□ -1.37
SFB3YHR098C NPR3P38742 1146 aa6.47□□□□□ -1.37
SFB3YHR098C SRC1Q03707 834 aa6.47□□□□□ -1.37
SFB3YHR098C TAF8Q03750 510 aa6.47□□□□□ -1.37
SFB3YHR098C MAG2Q06436 670 aaKnown RBP6.47□□□□□ -1.37
SFB3YHR098C MVP1P40959 511 aaKnown RBP6.47□□□□□ -1.37
SFB3YHR098C UBX5Q06682 500 aa6.47□□□□□ -1.37
SFB3YHR098C HSP104P31539 908 aaKnown RBP6.46□□□□□ -1.37
SFB3YHR098C MDM38Q08179 573 aa6.46□□□□□ -1.37
SFB3YHR098C DCD1P06773 312 aa6.46□□□□□ -1.38
SFB3YHR098C FRS2P15625 503 aaKnown RBP6.46□□□□□ -1.38
SFB3YHR098C KAR2P16474 682 aaKnown RBP6.46□□□□□ -1.38
SFB3YHR098C PUP1P25043 261 aa6.46□□□□□ -1.38
SFB3YHR098C BDP1P46678 594 aa6.46□□□□□ -1.38
SFB3YHR098C CTH1P47976 325 aa6.46□□□□□ -1.38
SFB3YHR098C COG4Q06096 861 aa6.46□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms