RNA–Protein interactions for RNA: YGR178C

PBP1, Transcript of Component of glucose deprivation induced stress granules, yeastyeast

Gene PBP1, Length 2,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP1YGR178C AKL1P38080 1108 aaKnown RBP11.5□□□□□ -0.57
PBP1YGR178C ATE1P16639 503 aa11.5□□□□□ -0.57
PBP1YGR178C MBR1P23493 339 aa11.5□□□□□ -0.57
PBP1YGR178C YGL082WP53155 381 aa11.5□□□□□ -0.57
PBP1YGR178C RPO41P13433 1351 aaKnown RBP11.49□□□□□ -0.57
PBP1YGR178C GDT1P38301 280 aaPredicted RBP11.49□□□□□ -0.57
PBP1YGR178C MRS2Q01926 470 aa11.49□□□□□ -0.57
PBP1YGR178C YMR102CQ03177 834 aa11.49□□□□□ -0.57
PBP1YGR178C SML1Q04964 104 aa11.49□□□□□ -0.57
PBP1YGR178C BDP1P46678 594 aa11.48□□□□□ -0.57
PBP1YGR178C YNL050CP53952 270 aa11.48□□□□□ -0.57
PBP1YGR178C TLG2Q08144 397 aa11.48□□□□□ -0.57
PBP1YGR178C RPL19AP0CX82 189 aaKnown RBP11.47□□□□□ -0.57
PBP1YGR178C RPL19BP0CX83 189 aaPredicted RBP11.47□□□□□ -0.57
PBP1YGR178C ELM1P32801 640 aa11.47□□□□□ -0.57
PBP1YGR178C SGD1Q06132 899 aa11.47□□□□□ -0.57
PBP1YGR178C YFR006WP43590 535 aa11.47□□□□□ -0.57
PBP1YGR178C YGR122WP53272 402 aa11.47□□□□□ -0.57
PBP1YGR178C YKL068W-AQ3E826 78 aa11.47□□□□□ -0.57
PBP1YGR178C TY1B-NL2Q99337 1749 aaKnown RBP11.46□□□□□ -0.57
PBP1YGR178C MRC1P25588 1096 aa11.46□□□□□ -0.57
PBP1YGR178C PRX1P34227 261 aaKnown RBP11.46□□□□□ -0.57
PBP1YGR178C VPS41P38959 992 aa11.46□□□□□ -0.57
PBP1YGR178C JSN1P47135 1091 aaKnown RBP RIP-Chip data11.46□□□□□ -0.57not detected
PBP1YGR178C CTI6Q08923 506 aa11.46□□□□□ -0.57
PBP1YGR178C RTT107P38850 1070 aa11.45□□□□□ -0.58
PBP1YGR178C RPN7Q06103 429 aaKnown RBP11.45□□□□□ -0.58
PBP1YGR178C YOL087CQ99247 1116 aa11.45□□□□□ -0.58
PBP1YGR178C PEX14P53112 341 aa11.44□□□□□ -0.58
PBP1YGR178C CTH1P47976 325 aa11.44□□□□□ -0.58
PBP1YGR178C RMD1Q03441 430 aa11.44□□□□□ -0.58
PBP1YGR178C SRC1Q03707 834 aa11.44□□□□□ -0.58
PBP1YGR178C ETT1Q08421 412 aaKnown RBP11.44□□□□□ -0.58
PBP1YGR178C RAD24P32641 659 aa11.43□□□□□ -0.58
PBP1YGR178C MAM1P40065 302 aa11.43□□□□□ -0.58
PBP1YGR178C MSH1P25846 959 aa11.43□□□□□ -0.58
PBP1YGR178C SIC1P38634 284 aa11.43□□□□□ -0.58
PBP1YGR178C MTR4P47047 1073 aaKnown RBP11.43□□□□□ -0.58
PBP1YGR178C ENT3P47160 408 aa11.43□□□□□ -0.58
PBP1YGR178C TTI1P36097 1038 aa11.42□□□□□ -0.58
PBP1YGR178C OSW7P43611 510 aa11.41□□□□□ -0.58
PBP1YGR178C APC1P53886 1748 aa11.41□□□□□ -0.58
PBP1YGR178C VMS1Q04311 632 aaKnown RBP11.41□□□□□ -0.58
PBP1YGR178C COG4Q06096 861 aa11.41□□□□□ -0.58
PBP1YGR178C TSR3Q12094 313 aaKnown RBP11.41□□□□□ -0.58
PBP1YGR178C DPS1P04802 557 aaKnown RBP11.4□□□□□ -0.58
PBP1YGR178C MSH3P25336 1018 aa11.4□□□□□ -0.58
PBP1YGR178C CTF18P49956 741 aa11.4□□□□□ -0.58
PBP1YGR178C NOP8Q08287 484 aaPredicted RBP11.4□□□□□ -0.58
PBP1YGR178C GIN4Q12263 1142 aa11.4□□□□□ -0.58
PBP1YGR178C RPS24AP0CX31 135 aaKnown RBP11.4□□□□□ -0.59
PBP1YGR178C RPS24BP0CX32 135 aaKnown RBP11.4□□□□□ -0.59
PBP1YGR178C GCD7P32502 381 aaPredicted RBP11.4□□□□□ -0.59
PBP1YGR178C PRP3Q03338 469 aaPredicted RBP11.4□□□□□ -0.59
PBP1YGR178C GYL1Q04322 720 aa11.4□□□□□ -0.59
PBP1YGR178C TFC8Q12308 588 aa11.4□□□□□ -0.59
PBP1YGR178C NTH2P35172 780 aa11.39□□□□□ -0.59
PBP1YGR178C COQ4O13525 335 aa11.38□□□□□ -0.59
PBP1YGR178C AIM9P40053 627 aaKnown RBP11.38□□□□□ -0.59
PBP1YGR178C ARP5P53946 755 aa11.38□□□□□ -0.59
PBP1YGR178C MAK10Q02197 733 aa11.38□□□□□ -0.59
PBP1YGR178C PET111P08468 800 aa11.38□□□□□ -0.59
PBP1YGR178C RIM101P33400 625 aa11.38□□□□□ -0.59
PBP1YGR178C AAP1P37898 856 aaKnown RBP11.37□□□□□ -0.59
PBP1YGR178C FYV10P40492 516 aa11.37□□□□□ -0.59
PBP1YGR178C MSH4P40965 878 aaPredicted RBP11.37□□□□□ -0.59
PBP1YGR178C RIM20Q12033 661 aa11.37□□□□□ -0.59
PBP1YGR178C SWC3P31376 625 aa11.37□□□□□ -0.59
PBP1YGR178C PSE1P32337 1089 aaKnown RBP11.37□□□□□ -0.59
PBP1YGR178C DDP1Q99321 188 aaKnown RBP11.37□□□□□ -0.59
PBP1YGR178C CPA2P03965 1118 aaKnown RBP11.36□□□□□ -0.59
PBP1YGR178C GPA1P08539 472 aa11.36□□□□□ -0.59
PBP1YGR178C RDS1P25611 832 aa11.36□□□□□ -0.59
PBP1YGR178C DEF1P35732 738 aaKnown RBP11.36□□□□□ -0.59
PBP1YGR178C YER130CP39959 443 aa11.36□□□□□ -0.59
PBP1YGR178C PSH1Q12161 406 aa11.36□□□□□ -0.59
PBP1YGR178C PET123P17558 318 aa11.35□□□□□ -0.59
PBP1YGR178C UBP10P53874 792 aaPredicted RBP11.35□□□□□ -0.59
PBP1YGR178C RIA1P53893 1110 aa11.35□□□□□ -0.59
PBP1YGR178C CPS1P27614 576 aa11.35□□□□□ -0.59
PBP1YGR178C RRB1Q04225 511 aaKnown RBP11.34□□□□□ -0.59
PBP1YGR178C HSP104P31539 908 aaKnown RBP11.34□□□□□ -0.59
PBP1YGR178C SLD2P34252 453 aa11.34□□□□□ -0.59
PBP1YGR178C RRM3P38766 723 aa11.34□□□□□ -0.59
PBP1YGR178C MVP1P40959 511 aaKnown RBP11.34□□□□□ -0.59
PBP1YGR178C WAR1Q03631 944 aa11.34□□□□□ -0.59
PBP1YGR178C PCH2P38126 564 aa11.33□□□□□ -0.6
PBP1YGR178C NOC2P39744 710 aaKnown RBP11.31□□□□□ -0.6
PBP1YGR178C BOI2P39969 1040 aa11.31□□□□□ -0.6
PBP1YGR178C SWH1P35845 1188 aa11.31□□□□□ -0.6
PBP1YGR178C YNL035CP53962 389 aaKnown RBP11.31□□□□□ -0.6
PBP1YGR178C DOS2P54858 310 aa11.31□□□□□ -0.6
PBP1YGR178C RBA50Q04418 439 aa11.3□□□□□ -0.6
PBP1YGR178C APL4Q12028 832 aa11.3□□□□□ -0.6
PBP1YGR178C SRP40P32583 406 aaPredicted RBP11.3□□□□□ -0.6
PBP1YGR178C SAP1P39955 897 aaKnown RBP11.3□□□□□ -0.6
PBP1YGR178C ECM21P38167 1117 aaKnown RBP11.29□□□□□ -0.6
PBP1YGR178C ELG1Q12050 791 aa11.29□□□□□ -0.6
PBP1YGR178C ADE6P38972 1358 aaKnown RBP11.29□□□□□ -0.6
PBP1YGR178C YRF1-2P40105 1681 aa11.29□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms