RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W ENO2P00925 437 aaKnown RBP5.83□□□□□ -1.48
PRE9YGR135W SUP45P12385 437 aaKnown RBP5.83□□□□□ -1.48
PRE9YGR135W CAF120P53836 1060 aa5.83□□□□□ -1.48
PRE9YGR135W UBP2Q01476 1272 aa5.83□□□□□ -1.48
PRE9YGR135W BDS1Q08347 646 aa5.83□□□□□ -1.48
PRE9YGR135W YDJ1P25491 409 aaKnown RBP5.82□□□□□ -1.48
PRE9YGR135W YJR098CP47139 656 aa5.82□□□□□ -1.48
PRE9YGR135W ATG20Q07528 640 aa5.82□□□□□ -1.48
PRE9YGR135W TY1A-BLQ12266 440 aa5.82□□□□□ -1.48
PRE9YGR135W SSK2P53599 1579 aa5.81□□□□□ -1.48
PRE9YGR135W RPP2BP02400 110 aaKnown RBP5.81□□□□□ -1.48
PRE9YGR135W STE6P12866 1290 aa5.81□□□□□ -1.48
PRE9YGR135W DLD1P32891 587 aa5.81□□□□□ -1.48
PRE9YGR135W MCM16Q12262 181 aa5.81□□□□□ -1.48
PRE9YGR135W THO2P53552 1597 aaKnown RBP5.8□□□□□ -1.48
PRE9YGR135W TGL4P36165 910 aa5.8□□□□□ -1.48
PRE9YGR135W ISU1Q03020 165 aa5.8□□□□□ -1.48
PRE9YGR135W TCB1Q12466 1186 aa5.8□□□□□ -1.48
PRE9YGR135W TRM732Q03496 1420 aa5.8□□□□□ -1.48
PRE9YGR135W STM1P39015 273 aaKnown RBP5.79□□□□□ -1.48
PRE9YGR135W STU1P38198 1513 aa5.79□□□□□ -1.48
PRE9YGR135W ASF1P32447 279 aa5.78□□□□□ -1.48
PRE9YGR135W IPL1P38991 367 aa5.78□□□□□ -1.48
PRE9YGR135W KTR7P40504 517 aa5.78□□□□□ -1.48
PRE9YGR135W EMP47P43555 445 aa5.78□□□□□ -1.48
PRE9YGR135W YPP1P46951 817 aa5.78□□□□□ -1.48
PRE9YGR135W MRX10Q05648 414 aa5.78□□□□□ -1.48
PRE9YGR135W POL1P13382 1468 aa5.77□□□□□ -1.49
PRE9YGR135W TAF2P23255 1407 aa5.77□□□□□ -1.49
PRE9YGR135W SEC20P28791 383 aa5.77□□□□□ -1.49
PRE9YGR135W YIR007WP40566 764 aa5.77□□□□□ -1.49
PRE9YGR135W APL6P46682 809 aa5.77□□□□□ -1.49
PRE9YGR135W ECM23Q02710 187 aa5.77□□□□□ -1.49
PRE9YGR135W YBL113CQ7M4S9 792 aa5.77□□□□□ -1.49
PRE9YGR135W DLD3P39976 496 aaKnown RBP5.76□□□□□ -1.49
PRE9YGR135W ATG3P40344 310 aa5.76□□□□□ -1.49
PRE9YGR135W RIM21P48565 533 aa5.76□□□□□ -1.49
PRE9YGR135W YTA7P40340 1379 aa5.76□□□□□ -1.49
PRE9YGR135W IKI3Q06706 1349 aaKnown RBP5.75□□□□□ -1.49
PRE9YGR135W ISF1P32488 338 aa5.75□□□□□ -1.49
PRE9YGR135W VTC4P47075 721 aa5.75□□□□□ -1.49
PRE9YGR135W SPP41P38904 1435 aa5.74□□□□□ -1.49
PRE9YGR135W OSH7P38755 437 aa5.74□□□□□ -1.49
PRE9YGR135W ISR1Q06098 443 aaKnown RBP5.74□□□□□ -1.49
PRE9YGR135W ROG3P43602 733 aa5.73□□□□□ -1.49
PRE9YGR135W ALD2P47771 506 aa5.73□□□□□ -1.49
PRE9YGR135W YGR035CP53222 116 aa5.73□□□□□ -1.49
PRE9YGR135W UTP13Q05946 817 aaKnown RBP5.73□□□□□ -1.49
PRE9YGR135W SPT2P06843 333 aaPredicted RBP5.72□□□□□ -1.49
PRE9YGR135W BRN1P38170 754 aa5.72□□□□□ -1.49
PRE9YGR135W UBX7P38349 436 aa5.72□□□□□ -1.49
PRE9YGR135W ERP5P38819 212 aa5.72□□□□□ -1.49
PRE9YGR135W KAR5Q04746 504 aa5.72□□□□□ -1.49
PRE9YGR135W SWR1Q05471 1514 aa5.72□□□□□ -1.49
PRE9YGR135W BPT1P14772 1559 aa5.72□□□□□ -1.49
PRE9YGR135W MYO2P19524 1574 aaKnown RBP5.72□□□□□ -1.49
PRE9YGR135W UTR2P32623 467 aa5.71□□□□□ -1.5
PRE9YGR135W TY1A-MR1Q04215 440 aa5.71□□□□□ -1.5
PRE9YGR135W MSC6Q08818 692 aaKnown RBP5.71□□□□□ -1.5
PRE9YGR135W ECM5Q03214 1411 aa5.71□□□□□ -1.5
PRE9YGR135W PEP12P32854 288 aa5.7□□□□□ -1.5
PRE9YGR135W THI12P42883 340 aa5.7□□□□□ -1.5
PRE9YGR135W THI5P43534 340 aa5.7□□□□□ -1.5
PRE9YGR135W THI11P47183 340 aa5.7□□□□□ -1.5
PRE9YGR135W HPF1Q05164 967 aa5.7□□□□□ -1.5
PRE9YGR135W THI13Q07748 340 aa5.7□□□□□ -1.5
PRE9YGR135W WTM2Q12206 467 aa5.7□□□□□ -1.5
PRE9YGR135W SCC2Q04002 1493 aa5.7□□□□□ -1.5
PRE9YGR135W ESP1Q03018 1630 aa5.7□□□□□ -1.5
PRE9YGR135W CDC19P00549 500 aaKnown RBP5.69□□□□□ -1.5
PRE9YGR135W DAT1P13483 248 aaKnown RBP5.69□□□□□ -1.5
PRE9YGR135W DAL1P32375 460 aa5.69□□□□□ -1.5
PRE9YGR135W GRS1P38088 690 aaKnown RBP5.69□□□□□ -1.5
PRE9YGR135W TBS1P38114 1094 aa5.69□□□□□ -1.5
PRE9YGR135W POL32P47110 350 aa5.69□□□□□ -1.5
PRE9YGR135W NUP170P38181 1502 aa5.69□□□□□ -1.5
PRE9YGR135W GAL2P13181 574 aa5.68□□□□□ -1.5
PRE9YGR135W TRK2P28584 889 aa5.68□□□□□ -1.5
PRE9YGR135W SOH1P38633 127 aa5.68□□□□□ -1.5
PRE9YGR135W YHL050CP38721 697 aa5.68□□□□□ -1.5
PRE9YGR135W YHR219WP38900 624 aa5.68□□□□□ -1.5
PRE9YGR135W HAL5P38970 855 aaKnown RBP5.68□□□□□ -1.5
PRE9YGR135W SSM4P40318 1319 aa5.68□□□□□ -1.5
PRE9YGR135W RDS2P19541 446 aaKnown RBP5.67□□□□□ -1.5
PRE9YGR135W ENP1P38333 483 aaKnown RBP5.67□□□□□ -1.5
PRE9YGR135W OCA5P38738 679 aa5.67□□□□□ -1.5
PRE9YGR135W MSN5P52918 1224 aa5.67□□□□□ -1.5
PRE9YGR135W DNA2P38859 1522 aa5.67□□□□□ -1.5
PRE9YGR135W MON2P48563 1636 aaPredicted RBP5.66□□□□□ -1.5
PRE9YGR135W MYO4P32492 1471 aa5.66□□□□□ -1.5
PRE9YGR135W YPK9Q12697 1472 aa5.66□□□□□ -1.5
PRE9YGR135W CCP1P00431 361 aa5.66□□□□□ -1.5
PRE9YGR135W NNF1P47149 201 aa5.66□□□□□ -1.5
PRE9YGR135W DPH6Q12429 685 aa5.66□□□□□ -1.5
PRE9YGR135W ATE1P16639 503 aa5.65□□□□□ -1.5
PRE9YGR135W LYS5P50113 272 aa5.65□□□□□ -1.5
PRE9YGR135W OYE2Q03558 400 aaKnown RBP5.65□□□□□ -1.5
PRE9YGR135W YOR1P53049 1477 aa5.64□□□□□ -1.51
PRE9YGR135W AHP1P38013 176 aaKnown RBP5.64□□□□□ -1.51
PRE9YGR135W SSN3P39073 555 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms