RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C CLB5P30283 435 aa4.15□□□□□ -1.75
PRE4YFR050C NPL4P33755 580 aa4.15□□□□□ -1.75
PRE4YFR050C ATF2P53296 535 aa4.15□□□□□ -1.75
PRE4YFR050C YNR021WP53723 404 aaKnown RBP4.15□□□□□ -1.75
PRE4YFR050C GLC3P32775 704 aa4.14□□□□□ -1.75
PRE4YFR050C TEA1P47988 759 aa4.14□□□□□ -1.75
PRE4YFR050C YML082WQ04533 649 aaKnown RBP4.14□□□□□ -1.75
PRE4YFR050C NUD1P32336 851 aa4.13□□□□□ -1.75
PRE4YFR050C YER156CP40093 338 aaKnown RBP4.13□□□□□ -1.75
PRE4YFR050C KIN4Q01919 800 aa4.13□□□□□ -1.75
PRE4YFR050C TIF6Q12522 245 aaKnown RBP4.13□□□□□ -1.75
PRE4YFR050C CLA4P48562 842 aa4.12□□□□□ -1.75
PRE4YFR050C GYP1Q08484 637 aa4.12□□□□□ -1.75
PRE4YFR050C PRP8P33334 2413 aaKnown RBP4.12□□□□□ -1.75
PRE4YFR050C RAM1P22007 431 aa4.11□□□□□ -1.75
PRE4YFR050C RPN1P38764 993 aaKnown RBP4.11□□□□□ -1.75
PRE4YFR050C YNR029CP53729 429 aaKnown RBP4.11□□□□□ -1.75
PRE4YFR050C YPR015CQ12531 247 aa4.11□□□□□ -1.75
PRE4YFR050C YDR034W-BQ6Q5X2 51 aa4.11□□□□□ -1.75
PRE4YFR050C THS1P04801 734 aaKnown RBP4.1□□□□□ -1.75
PRE4YFR050C CTT1P06115 562 aa4.1□□□□□ -1.75
PRE4YFR050C FBP1P09201 348 aa4.1□□□□□ -1.75
PRE4YFR050C KTR4P38131 464 aa4.1□□□□□ -1.75
PRE4YFR050C SEN1Q00416 2231 aaKnown RBP4.1□□□□□ -1.75
PRE4YFR050C GCD11P32481 527 aaKnown RBP4.09□□□□□ -1.75
PRE4YFR050C STR2P47164 639 aa4.09□□□□□ -1.75
PRE4YFR050C ISM1P48526 1002 aa4.09□□□□□ -1.75
PRE4YFR050C MSN5P52918 1224 aa4.09□□□□□ -1.75
PRE4YFR050C FPK1P53739 893 aa4.09□□□□□ -1.75
PRE4YFR050C ALD3P54114 506 aa4.09□□□□□ -1.75
PRE4YFR050C AIM7Q12156 149 aa4.09□□□□□ -1.75
PRE4YFR050C PRT1P06103 763 aaKnown RBP4.08□□□□□ -1.76
PRE4YFR050C FKS3Q04952 1785 aa4.07□□□□□ -1.76
PRE4YFR050C KRE5P22023 1365 aa4.07□□□□□ -1.76
PRE4YFR050C KEX2P13134 814 aa4.07□□□□□ -1.76
PRE4YFR050C PRP40P33203 583 aaKnown RBP4.07□□□□□ -1.76
PRE4YFR050C YIL089WP40500 205 aa4.07□□□□□ -1.76
PRE4YFR050C NIS1P53939 407 aa4.07□□□□□ -1.76
PRE4YFR050C SAS4Q04003 481 aa4.07□□□□□ -1.76
PRE4YFR050C BUD20Q08004 166 aaPredicted RBP4.07□□□□□ -1.76
PRE4YFR050C MHP1P43638 1398 aa4.06□□□□□ -1.76
PRE4YFR050C CFT1Q06632 1357 aaKnown RBP4.06□□□□□ -1.76
PRE4YFR050C RAD9P14737 1309 aa4.06□□□□□ -1.76
PRE4YFR050C PRP45P28004 379 aaPredicted RBP4.06□□□□□ -1.76
PRE4YFR050C SAP155P43612 1002 aa4.06□□□□□ -1.76
PRE4YFR050C RIA1P53893 1110 aa4.06□□□□□ -1.76
PRE4YFR050C YPL062WQ02781 134 aa4.06□□□□□ -1.76
PRE4YFR050C FRK1Q03002 865 aaPredicted RBP4.06□□□□□ -1.76
PRE4YFR050C KIN1P13185 1064 aa4.05□□□□□ -1.76
PRE4YFR050C RET1P22276 1149 aaKnown RBP4.05□□□□□ -1.76
PRE4YFR050C PAT1P25644 796 aaKnown RBP4.05□□□□□ -1.76
PRE4YFR050C SPT16P32558 1035 aaKnown RBP4.05□□□□□ -1.76
PRE4YFR050C PSK1P31374 1356 aa4.04□□□□□ -1.76
PRE4YFR050C MRF1P30775 413 aaPredicted RBP4.04□□□□□ -1.76
PRE4YFR050C RRN7P40992 514 aa4.04□□□□□ -1.76
PRE4YFR050C RTF1P53064 558 aa4.04□□□□□ -1.76
PRE4YFR050C YNL115CP53925 644 aa4.04□□□□□ -1.76
PRE4YFR050C LAM6Q08001 693 aa4.04□□□□□ -1.76
PRE4YFR050C TY1A-DR4O74302 440 aa4.03□□□□□ -1.76
PRE4YFR050C TY1A-HP0C2I4 478 aaKnown RBP4.03□□□□□ -1.76
PRE4YFR050C TY1A-AP0CX57 440 aa4.03□□□□□ -1.76
PRE4YFR050C TY1A-PR1P0CX58 440 aa4.03□□□□□ -1.76
PRE4YFR050C TY1A-ORP0CX59 440 aa4.03□□□□□ -1.76
PRE4YFR050C TY1A-PR2P0CX60 440 aa4.03□□□□□ -1.76
PRE4YFR050C TY1A-DR5P0CX65 440 aa4.03□□□□□ -1.76
PRE4YFR050C TY1A-ER2P0CX66 440 aa4.03□□□□□ -1.76
PRE4YFR050C TY1A-GR3P0CX67 440 aa4.03□□□□□ -1.76
PRE4YFR050C TY1A-LR1P0CX68 440 aa4.03□□□□□ -1.76
PRE4YFR050C TY1A-MR2P0CX69 440 aa4.03□□□□□ -1.76
PRE4YFR050C SLY41P22215 453 aa4.03□□□□□ -1.76
PRE4YFR050C TY1A-JR2P47099 440 aa4.03□□□□□ -1.76
PRE4YFR050C TY1A-DR1Q03856 440 aa4.03□□□□□ -1.76
PRE4YFR050C TY1A-ML1Q04706 440 aaKnown RBP4.03□□□□□ -1.76
PRE4YFR050C ERF2Q06551 359 aa4.03□□□□□ -1.76
PRE4YFR050C TY1A-BRQ12217 440 aa4.03□□□□□ -1.76
PRE4YFR050C TY1A-NL2Q12470 440 aa4.03□□□□□ -1.76
PRE4YFR050C TY1A-GR2Q12485 440 aa4.03□□□□□ -1.76
PRE4YFR050C ERG12P07277 443 aa4.02□□□□□ -1.77
PRE4YFR050C TRK1P12685 1235 aa4.02□□□□□ -1.77
PRE4YFR050C SIT4P20604 311 aa4.02□□□□□ -1.77
PRE4YFR050C YHR131CP38835 850 aa4.02□□□□□ -1.77
PRE4YFR050C MMP1Q12372 583 aa4.02□□□□□ -1.77
PRE4YFR050C YEL077CQ3E7X8 1277 aa4.02□□□□□ -1.77
PRE4YFR050C SEC2P17065 759 aa4.01□□□□□ -1.77
PRE4YFR050C YKR075CP36155 307 aa4.01□□□□□ -1.77
PRE4YFR050C CSN12P47130 423 aa4.01□□□□□ -1.77
PRE4YFR050C HST2P53686 357 aa4.01□□□□□ -1.77
PRE4YFR050C TBF1Q02457 562 aa4.01□□□□□ -1.77
PRE4YFR050C EAR1Q03212 550 aa4.01□□□□□ -1.77
PRE4YFR050C ROM2P51862 1356 aaKnown RBP4.01□□□□□ -1.77
PRE4YFR050C TY3B-IQ7LHG5 1498 aaKnown RBP4□□□□□ -1.77
PRE4YFR050C SCJ1P25303 377 aa4□□□□□ -1.77
PRE4YFR050C LEO1P38439 464 aa4□□□□□ -1.77
PRE4YFR050C CWH41P53008 833 aa4□□□□□ -1.77
PRE4YFR050C TYW1Q08960 810 aaKnown RBP4□□□□□ -1.77
PRE4YFR050C COBP00163 385 aa3.99□□□□□ -1.77
PRE4YFR050C ESS1P22696 170 aa3.99□□□□□ -1.77
PRE4YFR050C RTG2P32608 588 aaKnown RBP3.99□□□□□ -1.77
PRE4YFR050C TUB4P53378 473 aa3.99□□□□□ -1.77
PRE4YFR050C YNR014WP53719 212 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms