RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W HXT10P43581 546 aa8.88□□□□□ -0.99
PDA1YER178W YJR008WP47085 338 aa8.88□□□□□ -0.99
PDA1YER178W RAT1Q02792 1006 aaKnown RBP8.88□□□□□ -0.99
PDA1YER178W YLR271WQ06152 274 aa8.88□□□□□ -0.99
PDA1YER178W CTT1P06115 562 aa8.87□□□□□ -0.99
PDA1YER178W NUP133P36161 1157 aa8.87□□□□□ -0.99
PDA1YER178W BDF2Q07442 638 aa8.87□□□□□ -0.99
PDA1YER178W CDC45Q08032 650 aa8.87□□□□□ -0.99
PDA1YER178W SSK22P25390 1331 aaPredicted RBP8.86□□□□□ -0.99
PDA1YER178W FUN12P39730 1002 aaKnown RBP8.86□□□□□ -0.99
PDA1YER178W YER156CP40093 338 aaKnown RBP8.86□□□□□ -0.99
PDA1YER178W CST6P40535 587 aa8.86□□□□□ -0.99
PDA1YER178W YKL222CP35995 705 aa8.85□□□□□ -0.99
PDA1YER178W YIL092WP40497 633 aa8.85□□□□□ -0.99
PDA1YER178W DNM1P54861 757 aa8.85□□□□□ -0.99
PDA1YER178W HAA1Q12753 694 aaKnown RBP8.85□□□□□ -0.99
PDA1YER178W FIG2P25653 1609 aa8.84□□□□□ -0.99
PDA1YER178W ILV3P39522 585 aaKnown RBP8.84□□□□□ -0.99
PDA1YER178W ERO1Q03103 563 aa8.84□□□□□ -0.99
PDA1YER178W CSI1Q04368 295 aa8.84□□□□□ -0.99
PDA1YER178W HAT1Q12341 374 aa8.84□□□□□ -0.99
PDA1YER178W SET1P38827 1080 aaKnown RBP8.83□□□□□ -1
PDA1YER178W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
PDA1YER178W DAL5P15365 543 aa8.81□□□□□ -1
PDA1YER178W FRD1P32614 470 aaKnown RBP8.81□□□□□ -1
PDA1YER178W SET4P42948 560 aa8.81□□□□□ -1
PDA1YER178W YPP1P46951 817 aa8.81□□□□□ -1
PDA1YER178W SIT4P20604 311 aa8.8□□□□□ -1
PDA1YER178W ICL1P28240 557 aaPredicted RBP8.8□□□□□ -1
PDA1YER178W ITC1P53125 1264 aa8.8□□□□□ -1
PDA1YER178W PKH1Q03407 766 aa8.8□□□□□ -1
PDA1YER178W SYF1Q04048 859 aaPredicted RBP8.8□□□□□ -1
PDA1YER178W BOI2P39969 1040 aa8.79□□□□□ -1
PDA1YER178W SQS1P53866 767 aaKnown RBP8.79□□□□□ -1
PDA1YER178W IRC3Q06683 689 aa8.79□□□□□ -1
PDA1YER178W DIB1Q06819 143 aaPredicted RBP8.79□□□□□ -1
PDA1YER178W TRP5P00931 707 aaKnown RBP8.78□□□□□ -1
PDA1YER178W RPN1P38764 993 aaKnown RBP8.78□□□□□ -1
PDA1YER178W SAC3P46674 1301 aa8.78□□□□□ -1
PDA1YER178W TOP1P04786 769 aa8.77□□□□□ -1.01
PDA1YER178W RET1P22276 1149 aaKnown RBP8.77□□□□□ -1.01
PDA1YER178W SPL2P38839 148 aa8.77□□□□□ -1.01
PDA1YER178W UBP12P39538 1254 aa8.77□□□□□ -1.01
PDA1YER178W PSH1Q12161 406 aa8.77□□□□□ -1.01
PDA1YER178W RPS19AP07280 144 aaKnown RBP8.76□□□□□ -1.01
PDA1YER178W RPS19BP07281 144 aaPredicted RBP8.76□□□□□ -1.01
PDA1YER178W SLA1P32790 1244 aa8.76□□□□□ -1.01
PDA1YER178W GSC2P40989 1895 aa8.76□□□□□ -1.01
PDA1YER178W ICP55P40051 511 aa8.75□□□□□ -1.01
PDA1YER178W MAK21Q12176 1025 aaKnown RBP8.75□□□□□ -1.01
PDA1YER178W GAP1P19145 602 aaPredicted RBP8.74□□□□□ -1.01
PDA1YER178W RPT4P53549 437 aaKnown RBP8.74□□□□□ -1.01
PDA1YER178W SAS4Q04003 481 aa8.74□□□□□ -1.01
PDA1YER178W GAS5Q08193 484 aa8.74□□□□□ -1.01
PDA1YER178W FLO11P08640 1367 aa8.73□□□□□ -1.01
PDA1YER178W MGM1P32266 881 aa8.73□□□□□ -1.01
PDA1YER178W NGR1P32831 672 aaKnown RBP8.73□□□□□ -1.01
PDA1YER178W YRB30P53107 440 aaPredicted RBP8.73□□□□□ -1.01
PDA1YER178W ATG20Q07528 640 aa8.73□□□□□ -1.01
PDA1YER178W KRE2P27809 442 aa8.72□□□□□ -1.01
PDA1YER178W YKU70P32807 602 aa8.72□□□□□ -1.01
PDA1YER178W MTC5Q03897 1148 aa8.72□□□□□ -1.01
PDA1YER178W TOS4Q06266 489 aa8.72□□□□□ -1.01
PDA1YER178W THI3Q07471 609 aa8.72□□□□□ -1.01
PDA1YER178W DPH6Q12429 685 aa8.72□□□□□ -1.01
PDA1YER178W SHC1P39000 512 aa8.71□□□□□ -1.02
PDA1YER178W SPO1P53541 631 aa8.71□□□□□ -1.02
PDA1YER178W DPL1Q05567 589 aa8.71□□□□□ -1.02
PDA1YER178W PUS5Q06244 254 aa8.71□□□□□ -1.02
PDA1YER178W NOP8Q08287 484 aaPredicted RBP8.71□□□□□ -1.02
PDA1YER178W GRX6Q12438 231 aa8.71□□□□□ -1.02
PDA1YER178W AI2P03876 854 aa8.7□□□□□ -1.02
PDA1YER178W AVT3P36062 692 aa8.7□□□□□ -1.02
PDA1YER178W POL32P47110 350 aa8.7□□□□□ -1.02
PDA1YER178W ADR1P07248 1323 aa8.7□□□□□ -1.02
PDA1YER178W YLR278CQ05854 1341 aa8.7□□□□□ -1.02
PDA1YER178W LCB1P25045 558 aaKnown RBP8.69□□□□□ -1.02
PDA1YER178W GCD7P32502 381 aaPredicted RBP8.69□□□□□ -1.02
PDA1YER178W KTR3P38130 404 aaPredicted RBP8.69□□□□□ -1.02
PDA1YER178W YNG2P38806 282 aaKnown RBP8.69□□□□□ -1.02
PDA1YER178W FPK1P53739 893 aa8.69□□□□□ -1.02
PDA1YER178W RAD2P07276 1031 aa8.68□□□□□ -1.02
PDA1YER178W STV1P37296 890 aa8.68□□□□□ -1.02
PDA1YER178W SLI15P38283 698 aa8.68□□□□□ -1.02
PDA1YER178W IRC4Q03036 179 aa8.68□□□□□ -1.02
PDA1YER178W PUF6Q04373 656 aaKnown RBP8.67□□□□□ -1.02
PDA1YER178W POM152P39685 1337 aa8.66□□□□□ -1.02
PDA1YER178W THS1P04801 734 aaKnown RBP8.66□□□□□ -1.02
PDA1YER178W SSA4P22202 642 aaKnown RBP8.66□□□□□ -1.02
PDA1YER178W GSM1P42950 618 aa8.66□□□□□ -1.02
PDA1YER178W FLO1P32768 1537 aa8.65□□□□□ -1.02
PDA1YER178W SEC18P18759 758 aaKnown RBP8.65□□□□□ -1.02
PDA1YER178W RPN7Q06103 429 aaKnown RBP8.65□□□□□ -1.02
PDA1YER178W AFG2P32794 780 aa8.64□□□□□ -1.03
PDA1YER178W GLO3P38682 493 aaKnown RBP8.64□□□□□ -1.03
PDA1YER178W FET4P40988 552 aa8.64□□□□□ -1.03
PDA1YER178W VPS4P52917 437 aa8.64□□□□□ -1.03
PDA1YER178W YNL193WP53870 558 aa8.64□□□□□ -1.03
PDA1YER178W GYP5Q12344 894 aa8.64□□□□□ -1.03
PDA1YER178W RPT3P33298 428 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 250.5 ms