RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W PAC1P39946 494 aaKnown RBP6.61□□□□□ -1.35
UBP9YER098W TRS120Q04183 1289 aa6.61□□□□□ -1.35
UBP9YER098W ISR1Q06098 443 aaKnown RBP6.61□□□□□ -1.35
UBP9YER098W PPG1P32838 368 aa6.6□□□□□ -1.35
UBP9YER098W SRP40P32583 406 aaPredicted RBP6.6□□□□□ -1.35
UBP9YER098W POL5P39985 1022 aaKnown RBP6.6□□□□□ -1.35
UBP9YER098W YFL034WP43564 1073 aa6.6□□□□□ -1.35
UBP9YER098W MAD1P40957 749 aa6.59□□□□□ -1.35
UBP9YER098W IOC3P43596 787 aa6.59□□□□□ -1.35
UBP9YER098W ULI1P43604 169 aa6.59□□□□□ -1.35
UBP9YER098W SPR3P41901 512 aa6.59□□□□□ -1.36
UBP9YER098W VPS16Q03308 798 aa6.59□□□□□ -1.36
UBP9YER098W TRM732Q03496 1420 aa6.58□□□□□ -1.36
UBP9YER098W TOP1P04786 769 aa6.58□□□□□ -1.36
UBP9YER098W PHO4P07270 312 aaKnown RBP6.58□□□□□ -1.36
UBP9YER098W BUD31P25337 157 aaPredicted RBP6.58□□□□□ -1.36
UBP9YER098W NTH2P35172 780 aa6.58□□□□□ -1.36
UBP9YER098W HDA3Q06623 655 aa6.58□□□□□ -1.36
UBP9YER098W UBP1P25037 809 aa6.57□□□□□ -1.36
UBP9YER098W VAC17P25591 423 aa6.57□□□□□ -1.36
UBP9YER098W YKL091CP33324 310 aaKnown RBP6.57□□□□□ -1.36
UBP9YER098W PIN2Q12057 282 aa6.57□□□□□ -1.36
UBP9YER098W STH1P32597 1359 aa6.56□□□□□ -1.36
UBP9YER098W DAK2P43550 591 aa6.56□□□□□ -1.36
UBP9YER098W CWH41P53008 833 aa6.56□□□□□ -1.36
UBP9YER098W KXD1P53158 218 aa6.56□□□□□ -1.36
UBP9YER098W YNL035CP53962 389 aaKnown RBP6.56□□□□□ -1.36
UBP9YER098W YBL029C-AQ3E756 94 aa6.56□□□□□ -1.36
UBP9YER098W MON2P48563 1636 aaPredicted RBP6.55□□□□□ -1.36
UBP9YER098W CYT1P07143 309 aa6.55□□□□□ -1.36
UBP9YER098W CIT2P08679 460 aa6.55□□□□□ -1.36
UBP9YER098W RPB10P22139 70 aa6.55□□□□□ -1.36
UBP9YER098W SSF2Q12153 453 aaPredicted RBP6.55□□□□□ -1.36
UBP9YER098W PEP7P32609 515 aa6.55□□□□□ -1.36
UBP9YER098W HXT10P43581 546 aa6.55□□□□□ -1.36
UBP9YER098W FOX2Q02207 900 aaKnown RBP6.55□□□□□ -1.36
UBP9YER098W BUD20Q08004 166 aaPredicted RBP6.55□□□□□ -1.36
UBP9YER098W SPT2P06843 333 aaPredicted RBP6.54□□□□□ -1.36
UBP9YER098W ISC10P32645 267 aa6.54□□□□□ -1.36
UBP9YER098W YBR197CP38306 217 aa6.54□□□□□ -1.36
UBP9YER098W ATG36P46983 293 aa6.54□□□□□ -1.36
UBP9YER098W IKI3Q06706 1349 aaKnown RBP6.54□□□□□ -1.36
UBP9YER098W RPS6AP0CX37 236 aaKnown RBP6.53□□□□□ -1.36
UBP9YER098W RPS6BP0CX38 236 aaPredicted RBP6.53□□□□□ -1.36
UBP9YER098W NGR1P32831 672 aaKnown RBP6.53□□□□□ -1.36
UBP9YER098W PRS1P32895 427 aaKnown RBP6.53□□□□□ -1.36
UBP9YER098W TIF11P38912 153 aaKnown RBP6.53□□□□□ -1.36
UBP9YER098W RPS26AP39938 119 aaKnown RBP6.53□□□□□ -1.36
UBP9YER098W RPS26BP39939 119 aaKnown RBP6.53□□□□□ -1.36
UBP9YER098W RRN7P40992 514 aa6.53□□□□□ -1.36
UBP9YER098W VNX1P42839 908 aa6.53□□□□□ -1.36
UBP9YER098W SPP41P38904 1435 aa6.53□□□□□ -1.36
UBP9YER098W CLN2P20438 545 aa6.53□□□□□ -1.36
UBP9YER098W RRP14P36080 434 aaKnown RBP6.53□□□□□ -1.36
UBP9YER098W YJR008WP47085 338 aa6.53□□□□□ -1.36
UBP9YER098W ALG12P53730 551 aa6.53□□□□□ -1.36
UBP9YER098W URN1Q06525 465 aaKnown RBP6.53□□□□□ -1.36
UBP9YER098W ATG20Q07528 640 aa6.53□□□□□ -1.36
UBP9YER098W IOC2Q12072 812 aa6.53□□□□□ -1.36
UBP9YER098W WRS1Q12109 432 aaKnown RBP6.53□□□□□ -1.36
UBP9YER098W HAP5Q02516 242 aa6.52□□□□□ -1.37
UBP9YER098W UFD2P54860 961 aa6.52□□□□□ -1.37
UBP9YER098W RMD1Q03441 430 aa6.52□□□□□ -1.37
UBP9YER098W CAB1Q04430 367 aa6.52□□□□□ -1.37
UBP9YER098W NSE3Q05541 303 aa6.52□□□□□ -1.37
UBP9YER098W GCD6P32501 712 aaKnown RBP6.51□□□□□ -1.37
UBP9YER098W FPR3P38911 411 aaKnown RBP6.51□□□□□ -1.37
UBP9YER098W OSW7P43611 510 aa6.51□□□□□ -1.37
UBP9YER098W APC11Q12157 165 aa6.51□□□□□ -1.37
UBP9YER098W RRD1P40454 393 aaKnown RBP6.51□□□□□ -1.37
UBP9YER098W ELP4Q02884 456 aaKnown RBP6.51□□□□□ -1.37
UBP9YER098W SWI5P08153 709 aa6.5□□□□□ -1.37
UBP9YER098W RTS3P53289 263 aa6.5□□□□□ -1.37
UBP9YER098W BDS1Q08347 646 aa6.5□□□□□ -1.37
UBP9YER098W CDC53Q12018 815 aaKnown RBP6.5□□□□□ -1.37
UBP9YER098W RTG1P32607 177 aa6.49□□□□□ -1.37
UBP9YER098W YJL049WP47048 450 aa6.49□□□□□ -1.37
UBP9YER098W RPN4Q03465 531 aa6.49□□□□□ -1.37
UBP9YER098W ESF1Q06344 628 aaKnown RBP6.49□□□□□ -1.37
UBP9YER098W SSM4P40318 1319 aa6.49□□□□□ -1.37
UBP9YER098W TSR4P25040 408 aa6.48□□□□□ -1.37
UBP9YER098W KTR2P33550 425 aa6.48□□□□□ -1.37
UBP9YER098W PET112P33893 541 aa6.48□□□□□ -1.37
UBP9YER098W RTT106P40161 455 aa6.48□□□□□ -1.37
UBP9YER098W SUT1P53032 299 aaKnown RBP6.48□□□□□ -1.37
UBP9YER098W MTO1P53070 669 aa6.48□□□□□ -1.37
UBP9YER098W MYO2P19524 1574 aaKnown RBP6.48□□□□□ -1.37
UBP9YER098W SPP1Q03012 353 aa6.48□□□□□ -1.37
UBP9YER098W CYC8P14922 966 aa6.47□□□□□ -1.37
UBP9YER098W PAT1P25644 796 aaKnown RBP6.47□□□□□ -1.37
UBP9YER098W TPD3P31383 635 aa6.47□□□□□ -1.37
UBP9YER098W SEC61P32915 480 aa6.47□□□□□ -1.37
UBP9YER098W PBP2P38151 413 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
UBP9YER098W YFR016CP43597 1233 aaKnown RBP6.47□□□□□ -1.37
UBP9YER098W YGR122WP53272 402 aa6.47□□□□□ -1.37
UBP9YER098W CWC24P53769 259 aa6.47□□□□□ -1.37
UBP9YER098W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
UBP9YER098W PRT1P06103 763 aaKnown RBP6.47□□□□□ -1.37
UBP9YER098W STI1P15705 589 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
UBP9YER098W CLC1P17891 233 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms