RNA–Protein interactions for RNA: YDR477W

SNF1, Transcript of AMP-activated serine/threonine protein kinase, yeast

Gene SNF1, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF1	YDR477W	RPL19B	P0CX83	189 aa	Predicted RBP	11.76	□□□□□ -0.53
SNF1	YDR477W	ELM1	P32801	640 aa		11.76	□□□□□ -0.53
SNF1	YDR477W	MFT1	P33441	392 aa	Known RBP	11.76	□□□□□ -0.53
SNF1	YDR477W	LTV1	P34078	463 aa		11.76	□□□□□ -0.53
SNF1	YDR477W	MNR2	P35724	969 aa		11.76	□□□□□ -0.53
SNF1	YDR477W	NPR3	P38742	1146 aa		11.76	□□□□□ -0.53
SNF1	YDR477W	AIM9	P40053	627 aa	Known RBP	11.76	□□□□□ -0.53
SNF1	YDR477W	YOL057W	Q08225	711 aa		11.76	□□□□□ -0.53
SNF1	YDR477W	FKS3	Q04952	1785 aa		11.76	□□□□□ -0.53
SNF1	YDR477W	RIM20	Q12033	661 aa		11.76	□□□□□ -0.53
SNF1	YDR477W	FPR4	Q06205	392 aa	Predicted RBP	11.75	□□□□□ -0.53
SNF1	YDR477W	SFI1	Q12369	946 aa		11.75	□□□□□ -0.53
SNF1	YDR477W	TRS33	Q99394	268 aa		11.75	□□□□□ -0.53
SNF1	YDR477W	SES1	P07284	462 aa	Known RBP	11.74	□□□□□ -0.53
SNF1	YDR477W	PRX1	P34227	261 aa	Known RBP	11.74	□□□□□ -0.53
SNF1	YDR477W	SPT21	P35209	758 aa		11.74	□□□□□ -0.53
SNF1	YDR477W	RAD4	P14736	754 aa		11.74	□□□□□ -0.53
SNF1	YDR477W	YDR306C	Q06640	478 aa		11.74	□□□□□ -0.53
SNF1	YDR477W	ATE1	P16639	503 aa		11.73	□□□□□ -0.53
SNF1	YDR477W	CIN4	P39110	191 aa		11.73	□□□□□ -0.53
SNF1	YDR477W	HGH1	P48362	394 aa	Known RBP	11.73	□□□□□ -0.53
SNF1	YDR477W	TSR3	Q12094	313 aa	Known RBP	11.73	□□□□□ -0.53
SNF1	YDR477W	TAF13	P11747	167 aa		11.72	□□□□□ -0.53
SNF1	YDR477W	NSE3	Q05541	303 aa		11.72	□□□□□ -0.53
SNF1	YDR477W	ECM21	P38167	1117 aa	Known RBP	11.72	□□□□□ -0.53
SNF1	YDR477W	CEP3	P40969	608 aa		11.72	□□□□□ -0.53
SNF1	YDR477W	UGA3	P26370	528 aa		11.71	□□□□□ -0.53
SNF1	YDR477W	SMC3	P47037	1230 aa		11.71	□□□□□ -0.53
SNF1	YDR477W	CTF18	P49956	741 aa		11.71	□□□□□ -0.53
SNF1	YDR477W	MRPS35	P53292	345 aa		11.7	□□□□□ -0.54
SNF1	YDR477W	PEX14	P53112	341 aa		11.69	□□□□□ -0.54
SNF1	YDR477W	ZDS2	P54786	942 aa		11.69	□□□□□ -0.54
SNF1	YDR477W	MAK10	Q02197	733 aa		11.69	□□□□□ -0.54
SNF1	YDR477W	PDR18	P53756	1333 aa		11.69	□□□□□ -0.54
SNF1	YDR477W	SGD1	Q06132	899 aa		11.68	□□□□□ -0.54
SNF1	YDR477W	CPA2	P03965	1118 aa	Known RBP	11.68	□□□□□ -0.54
SNF1	YDR477W	ENT3	P47160	408 aa		11.68	□□□□□ -0.54
SNF1	YDR477W	CTF4	Q01454	927 aa		11.68	□□□□□ -0.54
SNF1	YDR477W	ETT1	Q08421	412 aa	Known RBP	11.66	□□□□□ -0.54
SNF1	YDR477W	KCC4	P25389	1037 aa		11.66	□□□□□ -0.54
SNF1	YDR477W	NUP133	P36161	1157 aa		11.66	□□□□□ -0.54
SNF1	YDR477W	VPS60	Q03390	229 aa		11.66	□□□□□ -0.54
SNF1	YDR477W	DDP1	Q99321	188 aa	Known RBP	11.66	□□□□□ -0.54
SNF1	YDR477W	RDS1	P25611	832 aa		11.65	□□□□□ -0.54
SNF1	YDR477W	UTP13	Q05946	817 aa	Known RBP	11.65	□□□□□ -0.54
SNF1	YDR477W	BRE1	Q07457	700 aa	Known RBP	11.65	□□□□□ -0.54
SNF1	YDR477W	NCB2	Q92317	146 aa		11.64	□□□□□ -0.55
SNF1	YDR477W	NOP14	Q99207	810 aa	Known RBP	11.64	□□□□□ -0.55
SNF1	YDR477W	CLB5	P30283	435 aa		11.64	□□□□□ -0.55
SNF1	YDR477W	KTR3	P38130	404 aa	Predicted RBP	11.64	□□□□□ -0.55
SNF1	YDR477W	CTI6	Q08923	506 aa		11.64	□□□□□ -0.55
SNF1	YDR477W	SPB4	P25808	606 aa	Predicted RBP	11.63	□□□□□ -0.55
SNF1	YDR477W	TTI1	P36097	1038 aa		11.63	□□□□□ -0.55
SNF1	YDR477W	ALO1	P54783	526 aa	Known RBP	11.63	□□□□□ -0.55
SNF1	YDR477W	TFC8	Q12308	588 aa		11.63	□□□□□ -0.55
SNF1	YDR477W	MSB4	Q12317	492 aa		11.63	□□□□□ -0.55
SNF1	YDR477W	YGL082W	P53155	381 aa		11.62	□□□□□ -0.55
SNF1	YDR477W	GPA1	P08539	472 aa		11.62	□□□□□ -0.55
SNF1	YDR477W	FYV10	P40492	516 aa		11.62	□□□□□ -0.55
SNF1	YDR477W	YPL150W	Q12152	901 aa		11.62	□□□□□ -0.55
SNF1	YDR477W	SWI1	P09547	1314 aa		11.61	□□□□□ -0.55
SNF1	YDR477W	SPO22	P40511	975 aa		11.61	□□□□□ -0.55
SNF1	YDR477W	CTH1	P47976	325 aa		11.61	□□□□□ -0.55
SNF1	YDR477W	YER130C	P39959	443 aa		11.6	□□□□□ -0.55
SNF1	YDR477W	VID28	P40547	921 aa		11.6	□□□□□ -0.55
SNF1	YDR477W	YGL242C	P53066	181 aa		11.6	□□□□□ -0.55
SNF1	YDR477W	PIB2	P53191	635 aa		11.6	□□□□□ -0.55
SNF1	YDR477W	VMS1	Q04311	632 aa	Known RBP	11.6	□□□□□ -0.55
SNF1	YDR477W	ALE1	Q08548	619 aa		11.6	□□□□□ -0.55
SNF1	YDR477W	ELG1	Q12050	791 aa		11.6	□□□□□ -0.55
SNF1	YDR477W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	11.6	□□□□□ -0.55	not detected
SNF1	YDR477W	AVT3	P36062	692 aa		11.59	□□□□□ -0.55
SNF1	YDR477W	MAL33	P38157	468 aa		11.59	□□□□□ -0.55
SNF1	YDR477W	UBP12	P39538	1254 aa		11.59	□□□□□ -0.55
SNF1	YDR477W	CST6	P40535	587 aa		11.59	□□□□□ -0.55
SNF1	YDR477W	PRP31	P49704	494 aa	Predicted RBP	11.59	□□□□□ -0.55
SNF1	YDR477W	MLC1	P53141	149 aa		11.59	□□□□□ -0.55
SNF1	YDR477W	DNM1	P54861	757 aa		11.59	□□□□□ -0.55
SNF1	YDR477W	PGA3	Q12746	312 aa	Known RBP	11.59	□□□□□ -0.55
SNF1	YDR477W	SRC1	Q03707	834 aa		11.58	□□□□□ -0.55
SNF1	YDR477W	TPM1	P17536	199 aa	Known RBP	11.58	□□□□□ -0.56
SNF1	YDR477W	KTR1	P27810	393 aa	Known RBP	11.58	□□□□□ -0.56
SNF1	YDR477W	LPD1	P09624	499 aa	Known RBP	11.57	□□□□□ -0.56
SNF1	YDR477W	SRP40	P32583	406 aa	Predicted RBP	11.57	□□□□□ -0.56
SNF1	YDR477W	SLA1	P32790	1244 aa		11.57	□□□□□ -0.56
SNF1	YDR477W	ARP5	P53946	755 aa		11.57	□□□□□ -0.56
SNF1	YDR477W	COG4	Q06096	861 aa		11.57	□□□□□ -0.56
SNF1	YDR477W	DEP1	P31385	405 aa		11.56	□□□□□ -0.56
SNF1	YDR477W	RCR1	P38212	213 aa		11.56	□□□□□ -0.56
SNF1	YDR477W	RRM3	P38766	723 aa		11.56	□□□□□ -0.56
SNF1	YDR477W	SSF1	P38789	453 aa	Predicted RBP	11.56	□□□□□ -0.56
SNF1	YDR477W	WAR1	Q03631	944 aa		11.56	□□□□□ -0.56
SNF1	YDR477W	MRC1	P25588	1096 aa		11.56	□□□□□ -0.56
SNF1	YDR477W	HXT10	P43581	546 aa		11.56	□□□□□ -0.56
SNF1	YDR477W	CLB1	P24868	471 aa		11.55	□□□□□ -0.56
SNF1	YDR477W	MIF2	P35201	549 aa		11.55	□□□□□ -0.56
SNF1	YDR477W	CIC1	P38779	376 aa	Known RBP	11.55	□□□□□ -0.56
SNF1	YDR477W	YPT11	P48559	417 aa		11.55	□□□□□ -0.56
SNF1	YDR477W	INP54	Q08227	384 aa	Known RBP	11.55	□□□□□ -0.56
SNF1	YDR477W	SLM3	Q12093	417 aa		11.55	□□□□□ -0.56

Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms