RNA–Protein interactions for RNA: YDR405W

MRP20, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRP20, Length 792 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRP20	YDR405W	MRP7	P12687	371 aa		12.43	□□□□□ -0.42
MRP20	YDR405W	SWI1	P09547	1314 aa		12.42	□□□□□ -0.42
MRP20	YDR405W	SET1	P38827	1080 aa	Known RBP	12.4	□□□□□ -0.42
MRP20	YDR405W	GRX6	Q12438	231 aa		12.4	□□□□□ -0.42
MRP20	YDR405W	NUP133	P36161	1157 aa		12.39	□□□□□ -0.43
MRP20	YDR405W	UBP16	Q02863	499 aa		12.39	□□□□□ -0.43
MRP20	YDR405W	FPK1	P53739	893 aa		12.38	□□□□□ -0.43
MRP20	YDR405W	NOP8	Q08287	484 aa	Predicted RBP	12.38	□□□□□ -0.43
MRP20	YDR405W	RVB2	Q12464	471 aa	Known RBP	12.38	□□□□□ -0.43
MRP20	YDR405W	YPP1	P46951	817 aa		12.37	□□□□□ -0.43
MRP20	YDR405W	YKU70	P32807	602 aa		12.36	□□□□□ -0.43
MRP20	YDR405W	RPN1	P38764	993 aa	Known RBP	12.36	□□□□□ -0.43
MRP20	YDR405W	SQS1	P53866	767 aa	Known RBP	12.36	□□□□□ -0.43
MRP20	YDR405W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	12.36	□□□□□ -0.43	not detected
MRP20	YDR405W	SAS4	Q04003	481 aa		12.36	□□□□□ -0.43
MRP20	YDR405W	SUP35	P05453	685 aa	Known RBP	12.35	□□□□□ -0.43
MRP20	YDR405W	FRD1	P32614	470 aa	Known RBP	12.35	□□□□□ -0.43
MRP20	YDR405W	SHC1	P39000	512 aa		12.35	□□□□□ -0.43
MRP20	YDR405W	NOP2	P40991	618 aa	Known RBP	12.35	□□□□□ -0.43
MRP20	YDR405W	SAC3	P46674	1301 aa		12.35	□□□□□ -0.43
MRP20	YDR405W	ITC1	P53125	1264 aa		12.34	□□□□□ -0.43
MRP20	YDR405W	MTC5	Q03897	1148 aa		12.34	□□□□□ -0.43
MRP20	YDR405W	CAF20	P12962	161 aa	Known RBP	12.33	□□□□□ -0.44
MRP20	YDR405W	ICL1	P28240	557 aa	Predicted RBP	12.33	□□□□□ -0.44
MRP20	YDR405W	FCP1	Q03254	732 aa		12.33	□□□□□ -0.44
MRP20	YDR405W	RPS19A	P07280	144 aa	Known RBP	12.31	□□□□□ -0.44
MRP20	YDR405W	RPS19B	P07281	144 aa	Predicted RBP	12.31	□□□□□ -0.44
MRP20	YDR405W	PSH1	Q12161	406 aa		12.31	□□□□□ -0.44
MRP20	YDR405W	DPH6	Q12429	685 aa		12.31	□□□□□ -0.44
MRP20	YDR405W	TOP1	P04786	769 aa		12.3	□□□□□ -0.44
MRP20	YDR405W	RAD24	P32641	659 aa		12.3	□□□□□ -0.44
MRP20	YDR405W	PRS1	P32895	427 aa	Known RBP	12.3	□□□□□ -0.44
MRP20	YDR405W	UBP12	P39538	1254 aa		12.3	□□□□□ -0.44
MRP20	YDR405W	BOI2	P39969	1040 aa		12.29	□□□□□ -0.44
MRP20	YDR405W	UBX2	Q04228	584 aa		12.29	□□□□□ -0.44
MRP20	YDR405W	ATG20	Q07528	640 aa		12.29	□□□□□ -0.44
MRP20	YDR405W	RAD2	P07276	1031 aa		12.28	□□□□□ -0.44
MRP20	YDR405W	YGR122W	P53272	402 aa		12.28	□□□□□ -0.44
MRP20	YDR405W	YIL092W	P40497	633 aa		12.27	□□□□□ -0.45
MRP20	YDR405W	CSI1	Q04368	295 aa		12.27	□□□□□ -0.45
MRP20	YDR405W	RET1	P22276	1149 aa	Known RBP	12.26	□□□□□ -0.45
MRP20	YDR405W	SWC3	P31376	625 aa		12.26	□□□□□ -0.45
MRP20	YDR405W	ICP55	P40051	511 aa		12.26	□□□□□ -0.45
MRP20	YDR405W	DIP2	Q12220	943 aa	Predicted RBP	12.26	□□□□□ -0.45
MRP20	YDR405W	KRE2	P27809	442 aa		12.25	□□□□□ -0.45
MRP20	YDR405W	SLI15	P38283	698 aa		12.25	□□□□□ -0.45
MRP20	YDR405W	TIF4632	P39936	914 aa	Known RBP	12.25	□□□□□ -0.45
MRP20	YDR405W	DAL5	P15365	543 aa		12.24	□□□□□ -0.45
MRP20	YDR405W	PEX21	P50091	288 aa		12.24	□□□□□ -0.45
MRP20	YDR405W	DPL1	Q05567	589 aa		12.24	□□□□□ -0.45
MRP20	YDR405W	SNU66	Q12420	587 aa	Predicted RBP	12.24	□□□□□ -0.45
MRP20	YDR405W	PMD1	P32634	1753 aa		12.23	□□□□□ -0.45
MRP20	YDR405W	MSM1	P22438	575 aa		12.23	□□□□□ -0.45
MRP20	YDR405W	HGH1	P48362	394 aa	Known RBP	12.23	□□□□□ -0.45
MRP20	YDR405W	NUG1	P40010	520 aa	Known RBP	12.22	□□□□□ -0.45
MRP20	YDR405W	TRP5	P00931	707 aa	Known RBP	12.21	□□□□□ -0.45
MRP20	YDR405W	MGM1	P32266	881 aa		12.21	□□□□□ -0.45
MRP20	YDR405W	RTG2	P32608	588 aa	Known RBP	12.2	□□□□□ -0.46
MRP20	YDR405W	NGR1	P32831	672 aa	Known RBP	12.2	□□□□□ -0.46
MRP20	YDR405W	SRC1	Q03707	834 aa		12.2	□□□□□ -0.46
MRP20	YDR405W	THI3	Q07471	609 aa		12.2	□□□□□ -0.46
MRP20	YDR405W	SSF1	P38789	453 aa	Predicted RBP	12.19	□□□□□ -0.46
MRP20	YDR405W	YNG2	P38806	282 aa	Known RBP	12.18	□□□□□ -0.46
MRP20	YDR405W	ADR1	P07248	1323 aa		12.17	□□□□□ -0.46
MRP20	YDR405W	YLR278C	Q05854	1341 aa		12.17	□□□□□ -0.46
MRP20	YDR405W	GLC3	P32775	704 aa		12.17	□□□□□ -0.46
MRP20	YDR405W	SPL2	P38839	148 aa		12.17	□□□□□ -0.46
MRP20	YDR405W	RPT4	P53549	437 aa	Known RBP	12.17	□□□□□ -0.46
MRP20	YDR405W	CRF1	Q04930	467 aa		12.17	□□□□□ -0.46
MRP20	YDR405W	PSF3	Q12146	194 aa		12.17	□□□□□ -0.46
MRP20	YDR405W	THS1	P04801	734 aa	Known RBP	12.16	□□□□□ -0.46
MRP20	YDR405W	SSA4	P22202	642 aa	Known RBP	12.16	□□□□□ -0.46
MRP20	YDR405W	PUS5	Q06244	254 aa		12.16	□□□□□ -0.46
MRP20	YDR405W	RRG1	Q12167	365 aa	Predicted RBP	12.16	□□□□□ -0.46
MRP20	YDR405W	GCD7	P32502	381 aa	Predicted RBP	12.15	□□□□□ -0.46
MRP20	YDR405W	SET4	P42948	560 aa		12.15	□□□□□ -0.46
MRP20	YDR405W	TIM50	Q02776	476 aa		12.15	□□□□□ -0.46
MRP20	YDR405W	HXT10	P43581	546 aa		12.14	□□□□□ -0.47
MRP20	YDR405W	SPO1	P53541	631 aa		12.13	□□□□□ -0.47
MRP20	YDR405W	PRP42	Q03776	544 aa	Known RBP	12.13	□□□□□ -0.47
MRP20	YDR405W	POM152	P39685	1337 aa		12.12	□□□□□ -0.47
MRP20	YDR405W	GYP5	Q12344	894 aa		12.12	□□□□□ -0.47
MRP20	YDR405W	TFA1	P36100	482 aa		12.11	□□□□□ -0.47
MRP20	YDR405W	FET4	P40988	552 aa		12.11	□□□□□ -0.47
MRP20	YDR405W	IRC4	Q03036	179 aa		12.11	□□□□□ -0.47
MRP20	YDR405W	GAS5	Q08193	484 aa		12.11	□□□□□ -0.47
MRP20	YDR405W	LCB1	P25045	558 aa	Known RBP	12.1	□□□□□ -0.47
MRP20	YDR405W	AFG2	P32794	780 aa		12.1	□□□□□ -0.47
MRP20	YDR405W	YGR117C	P53270	476 aa		12.1	□□□□□ -0.47
MRP20	YDR405W	NCB2	Q92317	146 aa		12.1	□□□□□ -0.47
MRP20	YDR405W	HKR1	P41809	1802 aa		12.09	□□□□□ -0.47
MRP20	YDR405W	SEC18	P18759	758 aa	Known RBP	12.09	□□□□□ -0.47
MRP20	YDR405W	JJJ2	P46997	583 aa		12.09	□□□□□ -0.47
MRP20	YDR405W	TRM44	Q02648	567 aa	Known RBP	12.09	□□□□□ -0.47
MRP20	YDR405W	PUF6	Q04373	656 aa	Known RBP	12.09	□□□□□ -0.47
MRP20	YDR405W	PIF1	P07271	859 aa		12.08	□□□□□ -0.48
MRP20	YDR405W	POL32	P47110	350 aa		12.08	□□□□□ -0.48
MRP20	YDR405W	ACK1	Q07622	623 aa	Predicted RBP	12.08	□□□□□ -0.48
MRP20	YDR405W	EMP47	P43555	445 aa		12.07	□□□□□ -0.48
MRP20	YDR405W	WRS1	Q12109	432 aa	Known RBP	12.07	□□□□□ -0.48

Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms