RNA–Protein interactions for RNA: YDR337W

MRPS28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene MRPS28, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPS28YDR337W BOI2P39969 1040 aa8.22□□□□□ -1.09
MRPS28YDR337W YJR008WP47085 338 aa8.22□□□□□ -1.09
MRPS28YDR337W RPL17AP05740 184 aaKnown RBP8.2□□□□□ -1.1
MRPS28YDR337W UBP12P39538 1254 aa8.2□□□□□ -1.1
MRPS28YDR337W RPL17BP46990 184 aaKnown RBP8.2□□□□□ -1.1
MRPS28YDR337W FCP1Q03254 732 aa8.2□□□□□ -1.1
MRPS28YDR337W YLR271WQ06152 274 aa8.2□□□□□ -1.1
MRPS28YDR337W CTI6Q08923 506 aa8.2□□□□□ -1.1
MRPS28YDR337W BUG1Q12191 341 aa8.2□□□□□ -1.1
MRPS28YDR337W NMD2P38798 1089 aaKnown RBP8.19□□□□□ -1.1
MRPS28YDR337W YRF1-3P0CX14 1859 aa8.19□□□□□ -1.1
MRPS28YDR337W YRF1-7P0CX15 1859 aa8.19□□□□□ -1.1
MRPS28YDR337W YRF1-6P53819 1859 aa8.19□□□□□ -1.1
MRPS28YDR337W RFC1P38630 861 aaKnown RBP8.18□□□□□ -1.1
MRPS28YDR337W ITC1P53125 1264 aa8.18□□□□□ -1.1
MRPS28YDR337W GCD7P32502 381 aaPredicted RBP8.17□□□□□ -1.1
MRPS28YDR337W HXT10P43581 546 aa8.17□□□□□ -1.1
MRPS28YDR337W ALD2P47771 506 aa8.17□□□□□ -1.1
MRPS28YDR337W CTH1P47976 325 aa8.17□□□□□ -1.1
MRPS28YDR337W PSH1Q12161 406 aa8.17□□□□□ -1.1
MRPS28YDR337W SET1P38827 1080 aaKnown RBP8.16□□□□□ -1.1
MRPS28YDR337W UBP9P39967 754 aa8.16□□□□□ -1.1
MRPS28YDR337W ALD3P54114 506 aa8.16□□□□□ -1.1
MRPS28YDR337W BDF1P35817 686 aa8.15□□□□□ -1.1
MRPS28YDR337W YBL086CP38177 466 aa8.15□□□□□ -1.1
MRPS28YDR337W BDP1P46678 594 aa8.15□□□□□ -1.1
MRPS28YDR337W HGH1P48362 394 aaKnown RBP8.15□□□□□ -1.1
MRPS28YDR337W NKP2Q06162 153 aa8.15□□□□□ -1.1
MRPS28YDR337W SUP35P05453 685 aaKnown RBP8.14□□□□□ -1.11
MRPS28YDR337W UTP22P53254 1237 aaPredicted RBP8.14□□□□□ -1.11
MRPS28YDR337W HPC2Q01448 625 aa8.14□□□□□ -1.11
MRPS28YDR337W ECM16Q04217 1267 aaKnown RBP8.14□□□□□ -1.11
MRPS28YDR337W HAT1Q12341 374 aa8.14□□□□□ -1.11
MRPS28YDR337W SSA2P10592 639 aaKnown RBP8.13□□□□□ -1.11
MRPS28YDR337W UGA2P38067 497 aa8.13□□□□□ -1.11
MRPS28YDR337W SNU66Q12420 587 aaPredicted RBP8.13□□□□□ -1.11
MRPS28YDR337W SSF1P38789 453 aaPredicted RBP8.12□□□□□ -1.11
MRPS28YDR337W GTT3P39996 337 aa8.12□□□□□ -1.11
MRPS28YDR337W RIX7Q07844 837 aaKnown RBP8.12□□□□□ -1.11
MRPS28YDR337W NCB2Q92317 146 aa8.12□□□□□ -1.11
MRPS28YDR337W SLA1P32790 1244 aa8.11□□□□□ -1.11
MRPS28YDR337W TOS1P38288 455 aa8.11□□□□□ -1.11
MRPS28YDR337W RAT1Q02792 1006 aaKnown RBP8.11□□□□□ -1.11
MRPS28YDR337W RMD1Q03441 430 aa8.11□□□□□ -1.11
MRPS28YDR337W MTC5Q03897 1148 aa8.11□□□□□ -1.11
MRPS28YDR337W YGL242CP53066 181 aa8.09□□□□□ -1.11
MRPS28YDR337W SEC18P18759 758 aaKnown RBP8.08□□□□□ -1.12
MRPS28YDR337W UBP16Q02863 499 aa8.08□□□□□ -1.12
MRPS28YDR337W BDF2Q07442 638 aa8.08□□□□□ -1.12
MRPS28YDR337W NOT3P06102 836 aaKnown RBP8.07□□□□□ -1.12
MRPS28YDR337W CDC16P09798 840 aa8.07□□□□□ -1.12
MRPS28YDR337W CAF20P12962 161 aaKnown RBP8.07□□□□□ -1.12
MRPS28YDR337W NGR1P32831 672 aaKnown RBP8.07□□□□□ -1.12
MRPS28YDR337W ECM21P38167 1117 aaKnown RBP8.07□□□□□ -1.12
MRPS28YDR337W ALO1P54783 526 aaKnown RBP8.07□□□□□ -1.12
MRPS28YDR337W DIB1Q06819 143 aaPredicted RBP8.07□□□□□ -1.12
MRPS28YDR337W GYP5Q12344 894 aa8.07□□□□□ -1.12
MRPS28YDR337W RAD50P12753 1312 aa8.06□□□□□ -1.12
MRPS28YDR337W SSK22P25390 1331 aaPredicted RBP8.06□□□□□ -1.12
MRPS28YDR337W PDR18P53756 1333 aa8.06□□□□□ -1.12
MRPS28YDR337W AI2P03876 854 aa8.06□□□□□ -1.12
MRPS28YDR337W VAS1P07806 1104 aaKnown RBP8.06□□□□□ -1.12
MRPS28YDR337W KTR3P38130 404 aaPredicted RBP8.06□□□□□ -1.12
MRPS28YDR337W SYF1Q04048 859 aaPredicted RBP8.06□□□□□ -1.12
MRPS28YDR337W IRC3Q06683 689 aa8.06□□□□□ -1.12
MRPS28YDR337W FRD1P32614 470 aaKnown RBP8.05□□□□□ -1.12
MRPS28YDR337W YKR023WP36119 530 aaKnown RBP8.05□□□□□ -1.12
MRPS28YDR337W BRN1P38170 754 aa8.05□□□□□ -1.12
MRPS28YDR337W MLC1P53141 149 aa8.05□□□□□ -1.12
MRPS28YDR337W YNL193WP53870 558 aa8.05□□□□□ -1.12
MRPS28YDR337W DLD1P32891 587 aa8.04□□□□□ -1.12
MRPS28YDR337W RPN1P38764 993 aaKnown RBP8.04□□□□□ -1.12
MRPS28YDR337W GCR2Q01722 534 aa8.04□□□□□ -1.12
MRPS28YDR337W SRC1Q03707 834 aa8.04□□□□□ -1.12
MRPS28YDR337W RPN7Q06103 429 aaKnown RBP8.04□□□□□ -1.12
MRPS28YDR337W BRE1Q07457 700 aaKnown RBP8.04□□□□□ -1.12
MRPS28YDR337W MGM1P32266 881 aa8.03□□□□□ -1.12
MRPS28YDR337W FPR4Q06205 392 aaPredicted RBP8.03□□□□□ -1.12
MRPS28YDR337W THI3Q07471 609 aa8.03□□□□□ -1.12
MRPS28YDR337W SAC3P46674 1301 aa8.03□□□□□ -1.12
MRPS28YDR337W SIT4P20604 311 aa8.02□□□□□ -1.13
MRPS28YDR337W PFF1P38244 976 aa8.02□□□□□ -1.13
MRPS28YDR337W HXT13P39924 564 aa8.02□□□□□ -1.13
MRPS28YDR337W ICP55P40051 511 aa8.02□□□□□ -1.13
MRPS28YDR337W TGL3P40308 642 aa8.02□□□□□ -1.13
MRPS28YDR337W YIR014WP40570 242 aa8.02□□□□□ -1.13
MRPS28YDR337W MSN5P52918 1224 aa8.02□□□□□ -1.13
MRPS28YDR337W CWH41P53008 833 aa8.02□□□□□ -1.13
MRPS28YDR337W PIB2P53191 635 aa8.02□□□□□ -1.13
MRPS28YDR337W MRPS35P53292 345 aa8.02□□□□□ -1.13
MRPS28YDR337W RRI2Q12348 645 aa8.02□□□□□ -1.13
MRPS28YDR337W DPH6Q12429 685 aa8.02□□□□□ -1.13
MRPS28YDR337W HXT17P53631 564 aa8.01□□□□□ -1.13
MRPS28YDR337W ADR1P07248 1323 aa8.01□□□□□ -1.13
MRPS28YDR337W KTR1P27810 393 aaKnown RBP8□□□□□ -1.13
MRPS28YDR337W SMY1P32364 656 aaKnown RBP8□□□□□ -1.13
MRPS28YDR337W PBY1P38254 753 aa8□□□□□ -1.13
MRPS28YDR337W EAF6P47128 113 aa8□□□□□ -1.13
MRPS28YDR337W SAS4Q04003 481 aa8□□□□□ -1.13
MRPS28YDR337W RIM20Q12033 661 aa8□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms