RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF11, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF11YDR073W RPT1P33299 467 aaKnown RBP7.63□□□□□ -1.19
SNF11YDR073W YKL091CP33324 310 aaKnown RBP7.63□□□□□ -1.19
SNF11YDR073W AIM9P40053 627 aaKnown RBP7.63□□□□□ -1.19
SNF11YDR073W STR2P47164 639 aa7.63□□□□□ -1.19
SNF11YDR073W TRS120Q04183 1289 aa7.63□□□□□ -1.19
SNF11YDR073W CLN2P20438 545 aa7.62□□□□□ -1.19
SNF11YDR073W FPR3P38911 411 aaKnown RBP7.62□□□□□ -1.19
SNF11YDR073W MCM2P29469 868 aa7.61□□□□□ -1.19
SNF11YDR073W ISR1Q06098 443 aaKnown RBP7.61□□□□□ -1.19
SNF11YDR073W WRS1Q12109 432 aaKnown RBP7.61□□□□□ -1.19
SNF11YDR073W PDC1P06169 563 aaKnown RBP7.6□□□□□ -1.19
SNF11YDR073W PEP7P32609 515 aa7.6□□□□□ -1.19
SNF11YDR073W IXR1P33417 597 aa7.6□□□□□ -1.19
SNF11YDR073W KXD1P53158 218 aa7.6□□□□□ -1.19
SNF11YDR073W VPS16Q03308 798 aa7.6□□□□□ -1.19
SNF11YDR073W RMD1Q03441 430 aa7.6□□□□□ -1.19
SNF11YDR073W SPR28Q04921 423 aa7.6□□□□□ -1.19
SNF11YDR073W PIN2Q12057 282 aa7.6□□□□□ -1.19
SNF11YDR073W DPS1P04802 557 aaKnown RBP7.59□□□□□ -1.19
SNF11YDR073W NTH2P35172 780 aa7.59□□□□□ -1.19
SNF11YDR073W HAL5P38970 855 aaKnown RBP7.59□□□□□ -1.19
SNF11YDR073W TY1A-DR4O74302 440 aa7.58□□□□□ -1.2
SNF11YDR073W TY1A-HP0C2I4 478 aaKnown RBP7.58□□□□□ -1.2
SNF11YDR073W TY1A-AP0CX57 440 aa7.58□□□□□ -1.2
SNF11YDR073W TY1A-PR1P0CX58 440 aa7.58□□□□□ -1.2
SNF11YDR073W TY1A-ORP0CX59 440 aa7.58□□□□□ -1.2
SNF11YDR073W TY1A-PR2P0CX60 440 aa7.58□□□□□ -1.2
SNF11YDR073W TY1A-DR5P0CX65 440 aa7.58□□□□□ -1.2
SNF11YDR073W TY1A-ER2P0CX66 440 aa7.58□□□□□ -1.2
SNF11YDR073W TY1A-GR3P0CX67 440 aa7.58□□□□□ -1.2
SNF11YDR073W TY1A-LR1P0CX68 440 aa7.58□□□□□ -1.2
SNF11YDR073W TY1A-MR2P0CX69 440 aa7.58□□□□□ -1.2
SNF11YDR073W UBP1P25037 809 aa7.58□□□□□ -1.2
SNF11YDR073W GCD6P32501 712 aaKnown RBP7.58□□□□□ -1.2
SNF11YDR073W SUV3P32580 737 aa7.58□□□□□ -1.2
SNF11YDR073W YJL049WP47048 450 aa7.58□□□□□ -1.2
SNF11YDR073W TY1A-JR2P47099 440 aa7.58□□□□□ -1.2
SNF11YDR073W RTS3P53289 263 aa7.58□□□□□ -1.2
SNF11YDR073W UFD2P54860 961 aa7.58□□□□□ -1.2
SNF11YDR073W TY1A-DR1Q03856 440 aa7.58□□□□□ -1.2
SNF11YDR073W TY1A-ML1Q04706 440 aaKnown RBP7.58□□□□□ -1.2
SNF11YDR073W TY1A-BRQ12217 440 aa7.58□□□□□ -1.2
SNF11YDR073W TY1A-NL2Q12470 440 aa7.58□□□□□ -1.2
SNF11YDR073W TY1A-GR2Q12485 440 aa7.58□□□□□ -1.2
SNF11YDR073W CYT1P07143 309 aa7.57□□□□□ -1.2
SNF11YDR073W PHO4P07270 312 aaKnown RBP7.57□□□□□ -1.2
SNF11YDR073W SEC2P17065 759 aa7.57□□□□□ -1.2
SNF11YDR073W BOI1P38041 980 aaKnown RBP7.57□□□□□ -1.2
SNF11YDR073W IOC3P43596 787 aa7.57□□□□□ -1.2
SNF11YDR073W YJR008WP47085 338 aa7.57□□□□□ -1.2
SNF11YDR073W HDA3Q06623 655 aa7.57□□□□□ -1.2
SNF11YDR073W PAC1P39946 494 aaKnown RBP7.56□□□□□ -1.2
SNF11YDR073W GPI13Q07830 1017 aa7.56□□□□□ -1.2
SNF11YDR073W BUD20Q08004 166 aaPredicted RBP7.56□□□□□ -1.2
SNF11YDR073W CIT2P08679 460 aa7.55□□□□□ -1.2
SNF11YDR073W VAC17P25591 423 aa7.55□□□□□ -1.2
SNF11YDR073W RTT106P40161 455 aa7.55□□□□□ -1.2
SNF11YDR073W DAK2P43550 591 aa7.55□□□□□ -1.2
SNF11YDR073W ALG12P53730 551 aa7.55□□□□□ -1.2
SNF11YDR073W FOX2Q02207 900 aaKnown RBP7.55□□□□□ -1.2
SNF11YDR073W NSE3Q05541 303 aa7.55□□□□□ -1.2
SNF11YDR073W ESF1Q06344 628 aaKnown RBP7.55□□□□□ -1.2
SNF11YDR073W SSF2Q12153 453 aaPredicted RBP7.55□□□□□ -1.2
SNF11YDR073W RPS6AP0CX37 236 aaKnown RBP7.54□□□□□ -1.2
SNF11YDR073W RPS6BP0CX38 236 aaPredicted RBP7.54□□□□□ -1.2
SNF11YDR073W PAT1P25644 796 aaKnown RBP7.54□□□□□ -1.2
SNF11YDR073W ISC10P32645 267 aa7.54□□□□□ -1.2
SNF11YDR073W NGR1P32831 672 aaKnown RBP7.54□□□□□ -1.2
SNF11YDR073W NUG1P40010 520 aaKnown RBP7.54□□□□□ -1.2
SNF11YDR073W HXT10P43581 546 aa7.54□□□□□ -1.2
SNF11YDR073W CWC24P53769 259 aa7.54□□□□□ -1.2
SNF11YDR073W ATG20Q07528 640 aa7.54□□□□□ -1.2
SNF11YDR073W YOR131CQ12486 218 aa7.54□□□□□ -1.2
SNF11YDR073W STI1P15705 589 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2not detected
SNF11YDR073W RPS26AP39938 119 aaKnown RBP7.53□□□□□ -1.2
SNF11YDR073W RPS26BP39939 119 aaKnown RBP7.53□□□□□ -1.2
SNF11YDR073W UBP3Q01477 912 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2not detected
SNF11YDR073W CDC53Q12018 815 aaKnown RBP7.53□□□□□ -1.2
SNF11YDR073W RPB10P22139 70 aa7.52□□□□□ -1.21
SNF11YDR073W TSR4P25040 408 aa7.52□□□□□ -1.21
SNF11YDR073W PET112P33893 541 aa7.52□□□□□ -1.21
SNF11YDR073W YBR197CP38306 217 aa7.52□□□□□ -1.21
SNF11YDR073W RRN7P40992 514 aa7.52□□□□□ -1.21
SNF11YDR073W RPN4Q03465 531 aa7.52□□□□□ -1.21
SNF11YDR073W OXR1Q08952 273 aa7.52□□□□□ -1.21
SNF11YDR073W VPS35P34110 944 aa7.51□□□□□ -1.21
SNF11YDR073W POB3Q04636 552 aaKnown RBP7.51□□□□□ -1.21
SNF11YDR073W BDS1Q08347 646 aa7.51□□□□□ -1.21
SNF11YDR073W PRT1P06103 763 aaKnown RBP7.5□□□□□ -1.21
SNF11YDR073W TPD3P31383 635 aa7.5□□□□□ -1.21
SNF11YDR073W TOM20P35180 183 aa7.5□□□□□ -1.21
SNF11YDR073W MNR2P35724 969 aa7.5□□□□□ -1.21
SNF11YDR073W ATG36P46983 293 aa7.5□□□□□ -1.21
SNF11YDR073W SAM37P50110 327 aa7.5□□□□□ -1.21
SNF11YDR073W SWI5P08153 709 aa7.49□□□□□ -1.21
SNF11YDR073W YGR122WP53272 402 aa7.49□□□□□ -1.21
SNF11YDR073W SAS4Q04003 481 aa7.49□□□□□ -1.21
SNF11YDR073W APC11Q12157 165 aa7.49□□□□□ -1.21
SNF11YDR073W PBP2P38151 413 aaKnown RBP RIP-Chip data7.48□□□□□ -1.21not detected
SNF11YDR073W RRD1P40454 393 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms