RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C STB3Q12427 513 aa5.75□□□□□ -1.49
CDC48YDL126C SEC2P17065 759 aa5.74□□□□□ -1.49
CDC48YDL126C YJR008WP47085 338 aa5.74□□□□□ -1.49
CDC48YDL126C MSC6Q08818 692 aaKnown RBP5.74□□□□□ -1.49
CDC48YDL126C NUP188P52593 1655 aaKnown RBP5.74□□□□□ -1.49
CDC48YDL126C BRN1P38170 754 aa5.74□□□□□ -1.49
CDC48YDL126C YBL113CQ7M4S9 792 aa5.74□□□□□ -1.49
CDC48YDL126C VMR1P38735 1592 aa5.74□□□□□ -1.49
CDC48YDL126C TY1A-DR4O74302 440 aa5.73□□□□□ -1.49
CDC48YDL126C TY1A-HP0C2I4 478 aaKnown RBP5.73□□□□□ -1.49
CDC48YDL126C TY1A-AP0CX57 440 aa5.73□□□□□ -1.49
CDC48YDL126C TY1A-PR1P0CX58 440 aa5.73□□□□□ -1.49
CDC48YDL126C TY1A-ORP0CX59 440 aa5.73□□□□□ -1.49
CDC48YDL126C TY1A-PR2P0CX60 440 aa5.73□□□□□ -1.49
CDC48YDL126C TY1A-DR5P0CX65 440 aa5.73□□□□□ -1.49
CDC48YDL126C TY1A-ER2P0CX66 440 aa5.73□□□□□ -1.49
CDC48YDL126C TY1A-GR3P0CX67 440 aa5.73□□□□□ -1.49
CDC48YDL126C TY1A-LR1P0CX68 440 aa5.73□□□□□ -1.49
CDC48YDL126C TY1A-MR2P0CX69 440 aa5.73□□□□□ -1.49
CDC48YDL126C GAL2P13181 574 aa5.73□□□□□ -1.49
CDC48YDL126C TY1A-JR2P47099 440 aa5.73□□□□□ -1.49
CDC48YDL126C ECM23Q02710 187 aa5.73□□□□□ -1.49
CDC48YDL126C TY1A-DR1Q03856 440 aa5.73□□□□□ -1.49
CDC48YDL126C TY1A-ML1Q04706 440 aaKnown RBP5.73□□□□□ -1.49
CDC48YDL126C TY1A-BRQ12217 440 aa5.73□□□□□ -1.49
CDC48YDL126C TY1A-NL2Q12470 440 aa5.73□□□□□ -1.49
CDC48YDL126C TY1A-GR2Q12485 440 aa5.73□□□□□ -1.49
CDC48YDL126C DNF2Q12675 1612 aa5.73□□□□□ -1.49
CDC48YDL126C TRP5P00931 707 aaKnown RBP5.73□□□□□ -1.49
CDC48YDL126C ISF1P32488 338 aa5.72□□□□□ -1.49
CDC48YDL126C RPS0BP46654 252 aaKnown RBP5.72□□□□□ -1.49
CDC48YDL126C DPL1Q05567 589 aa5.72□□□□□ -1.49
CDC48YDL126C ROM1P53046 1155 aa5.72□□□□□ -1.49
CDC48YDL126C NOP7P53261 605 aaKnown RBP5.72□□□□□ -1.49
CDC48YDL126C KEX2P13134 814 aa5.71□□□□□ -1.5
CDC48YDL126C ISW1P38144 1129 aa5.71□□□□□ -1.5
CDC48YDL126C BOL3P39724 118 aa5.71□□□□□ -1.5
CDC48YDL126C YRR1Q12172 810 aa5.71□□□□□ -1.5
CDC48YDL126C IML1P47170 1584 aa5.71□□□□□ -1.5
CDC48YDL126C STR2P47164 639 aa5.71□□□□□ -1.5
CDC48YDL126C FRA1Q07825 749 aa5.71□□□□□ -1.5
CDC48YDL126C PUS6P53294 404 aa5.7□□□□□ -1.5
CDC48YDL126C ITT1Q04638 464 aa5.7□□□□□ -1.5
CDC48YDL126C IOC2Q12072 812 aa5.7□□□□□ -1.5
CDC48YDL126C PAF1P38351 445 aa5.7□□□□□ -1.5
CDC48YDL126C STM1P39015 273 aaKnown RBP5.7□□□□□ -1.5
CDC48YDL126C RAM1P22007 431 aa5.69□□□□□ -1.5
CDC48YDL126C ALD4P46367 519 aaKnown RBP5.69□□□□□ -1.5
CDC48YDL126C EMP47P43555 445 aa5.69□□□□□ -1.5
CDC48YDL126C PPX1P38698 397 aa5.68□□□□□ -1.5
CDC48YDL126C YHL050CP38721 697 aa5.68□□□□□ -1.5
CDC48YDL126C YHR219WP38900 624 aa5.68□□□□□ -1.5
CDC48YDL126C YPP1P46951 817 aa5.68□□□□□ -1.5
CDC48YDL126C ACS2P52910 683 aaKnown RBP5.68□□□□□ -1.5
CDC48YDL126C PUF6Q04373 656 aaKnown RBP5.68□□□□□ -1.5
CDC48YDL126C YEL077CQ3E7X8 1277 aa5.68□□□□□ -1.5
CDC48YDL126C FRT1Q99332 602 aa5.68□□□□□ -1.5
CDC48YDL126C PDR1P12383 1068 aa5.68□□□□□ -1.5
CDC48YDL126C SUV3P32580 737 aa5.68□□□□□ -1.5
CDC48YDL126C FIG4P42837 879 aa5.68□□□□□ -1.5
CDC48YDL126C TUB4P53378 473 aa5.68□□□□□ -1.5
CDC48YDL126C JIP4Q03361 876 aa5.68□□□□□ -1.5
CDC48YDL126C POL5P39985 1022 aaKnown RBP5.67□□□□□ -1.5
CDC48YDL126C OSW7P43611 510 aa5.67□□□□□ -1.5
CDC48YDL126C YDR344CQ05510 147 aa5.67□□□□□ -1.5
CDC48YDL126C MAG2Q06436 670 aaKnown RBP5.67□□□□□ -1.5
CDC48YDL126C NUD1P32336 851 aa5.67□□□□□ -1.5
CDC48YDL126C UBX7P38349 436 aa5.67□□□□□ -1.5
CDC48YDL126C GTT3P39996 337 aa5.67□□□□□ -1.5
CDC48YDL126C RAV1P47104 1357 aa5.67□□□□□ -1.5
CDC48YDL126C RTS3P53289 263 aa5.67□□□□□ -1.5
CDC48YDL126C UBX5Q06682 500 aa5.67□□□□□ -1.5
CDC48YDL126C RLP24Q07915 199 aaKnown RBP5.67□□□□□ -1.5
CDC48YDL126C QCR6P00127 147 aa5.66□□□□□ -1.5
CDC48YDL126C MET4P32389 672 aa5.66□□□□□ -1.5
CDC48YDL126C TCB2P48231 1178 aa5.66□□□□□ -1.5
CDC48YDL126C ISU2Q12056 156 aa5.66□□□□□ -1.5
CDC48YDL126C PDR11P40550 1411 aa5.66□□□□□ -1.5
CDC48YDL126C KTR2P33550 425 aa5.66□□□□□ -1.5
CDC48YDL126C YJR107WP47145 328 aa5.66□□□□□ -1.5
CDC48YDL126C ISM1P48526 1002 aa5.66□□□□□ -1.5
CDC48YDL126C KTR7P40504 517 aa5.65□□□□□ -1.5
CDC48YDL126C NMA111P53920 997 aa5.65□□□□□ -1.5
CDC48YDL126C HAL5P38970 855 aaKnown RBP5.65□□□□□ -1.51
CDC48YDL126C ATG1P53104 897 aa5.65□□□□□ -1.51
CDC48YDL126C PML39Q03760 334 aa5.65□□□□□ -1.51
CDC48YDL126C GPI13Q07830 1017 aa5.65□□□□□ -1.51
CDC48YDL126C RPP1BP10622 106 aaKnown RBP5.64□□□□□ -1.51
CDC48YDL126C PHO87P25360 923 aa5.64□□□□□ -1.51
CDC48YDL126C YPR097WQ06839 1073 aa5.64□□□□□ -1.51
CDC48YDL126C YDL206WQ12424 762 aa5.64□□□□□ -1.51
CDC48YDL126C SEC20P28791 383 aa5.64□□□□□ -1.51
CDC48YDL126C MNN4P36044 1178 aa5.64□□□□□ -1.51
CDC48YDL126C VNX1P42839 908 aa5.64□□□□□ -1.51
CDC48YDL126C VPS72Q03388 795 aa5.64□□□□□ -1.51
CDC48YDL126C RTC1Q08281 1341 aa5.63□□□□□ -1.51
CDC48YDL126C UTP13Q05946 817 aaKnown RBP5.63□□□□□ -1.51
CDC48YDL126C EAP1P36041 632 aaKnown RBP5.63□□□□□ -1.51
CDC48YDL126C PEX21P50091 288 aa5.63□□□□□ -1.51
CDC48YDL126C RPA14P50106 137 aa5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms