RNA–Protein interactions for RNA: YDL033C

SLM3, Transcript of tRNA-specific 2-thiouridylase, yeastyeast

Gene SLM3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLM3YDL033C PHM7Q12252 991 aa9.44□□□□□ -0.9
SLM3YDL033C TRK1P12685 1235 aa9.43□□□□□ -0.9
SLM3YDL033C YGL082WP53155 381 aa9.43□□□□□ -0.9
SLM3YDL033C RAT1Q02792 1006 aaKnown RBP9.43□□□□□ -0.9
SLM3YDL033C YDL144CQ07589 356 aa9.43□□□□□ -0.9
SLM3YDL033C NTH2P35172 780 aa9.42□□□□□ -0.9
SLM3YDL033C IRC3Q06683 689 aa9.42□□□□□ -0.9
SLM3YDL033C ICL1P28240 557 aaPredicted RBP9.41□□□□□ -0.9
SLM3YDL033C ERO1Q03103 563 aa9.41□□□□□ -0.9
SLM3YDL033C BDF2Q07442 638 aa9.41□□□□□ -0.9
SLM3YDL033C NOT3P06102 836 aaKnown RBP9.4□□□□□ -0.9
SLM3YDL033C IOC4Q04213 475 aa9.4□□□□□ -0.9
SLM3YDL033C SSP2Q08646 371 aa9.4□□□□□ -0.9
SLM3YDL033C TFC8Q12308 588 aa9.4□□□□□ -0.9
SLM3YDL033C NOP58Q12499 511 aaKnown RBP9.4□□□□□ -0.9
SLM3YDL033C THS1P04801 734 aaKnown RBP9.39□□□□□ -0.91
SLM3YDL033C RPS9BP05755 195 aaKnown RBP9.39□□□□□ -0.91
SLM3YDL033C MSP1P28737 362 aa9.39□□□□□ -0.91
SLM3YDL033C ATG20Q07528 640 aa9.39□□□□□ -0.91
SLM3YDL033C PMD1P32634 1753 aa9.38□□□□□ -0.91
SLM3YDL033C CAF20P12962 161 aaKnown RBP9.38□□□□□ -0.91
SLM3YDL033C RET1P22276 1149 aaKnown RBP9.38□□□□□ -0.91
SLM3YDL033C CDC27P38042 758 aa9.38□□□□□ -0.91
SLM3YDL033C DIB1Q06819 143 aaPredicted RBP9.38□□□□□ -0.91
SLM3YDL033C HOP09932 586 aa9.37□□□□□ -0.91
SLM3YDL033C SUI2P20459 304 aaKnown RBP9.37□□□□□ -0.91
SLM3YDL033C UGA3P26370 528 aa9.37□□□□□ -0.91
SLM3YDL033C YKU70P32807 602 aa9.37□□□□□ -0.91
SLM3YDL033C ARL1P38116 183 aaKnown RBP9.37□□□□□ -0.91
SLM3YDL033C SHC1P39000 512 aa9.37□□□□□ -0.91
SLM3YDL033C RAD2P07276 1031 aa9.36□□□□□ -0.91
SLM3YDL033C CTR9P89105 1077 aa9.36□□□□□ -0.91
SLM3YDL033C NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.36□□□□□ -0.91not detected
SLM3YDL033C LSP1Q12230 341 aaKnown RBP9.36□□□□□ -0.91
SLM3YDL033C SIT4P20604 311 aa9.35□□□□□ -0.91
SLM3YDL033C NSE3Q05541 303 aa9.35□□□□□ -0.91
SLM3YDL033C TOM1Q03280 3268 aa9.34□□□□□ -0.91
SLM3YDL033C RTG2P32608 588 aaKnown RBP9.34□□□□□ -0.91
SLM3YDL033C GRX6Q12438 231 aa9.34□□□□□ -0.91
SLM3YDL033C ARG8P18544 423 aa9.33□□□□□ -0.92
SLM3YDL033C SSP1P38871 571 aa9.33□□□□□ -0.92
SLM3YDL033C YGR130CP53278 816 aa9.33□□□□□ -0.92
SLM3YDL033C RRP46P53256 223 aaPredicted RBP9.32□□□□□ -0.92
SLM3YDL033C RLF2Q12495 606 aa9.32□□□□□ -0.92
SLM3YDL033C YLR278CQ05854 1341 aa9.31□□□□□ -0.92
SLM3YDL033C DCD1P06773 312 aa9.31□□□□□ -0.92
SLM3YDL033C RPN1P38764 993 aaKnown RBP9.31□□□□□ -0.92
SLM3YDL033C YPP1P46951 817 aa9.31□□□□□ -0.92
SLM3YDL033C YNL050CP53952 270 aa9.31□□□□□ -0.92
SLM3YDL033C SAS4Q04003 481 aa9.31□□□□□ -0.92
SLM3YDL033C FAS2P19097 1887 aaKnown RBP9.31□□□□□ -0.92
SLM3YDL033C APL2P36000 726 aaPredicted RBP9.3□□□□□ -0.92
SLM3YDL033C FRD1P32614 470 aaKnown RBP9.29□□□□□ -0.92
SLM3YDL033C VHR2P40041 505 aa9.29□□□□□ -0.92
SLM3YDL033C UBP16Q02863 499 aa9.29□□□□□ -0.92
SLM3YDL033C VPS64Q03944 604 aa9.29□□□□□ -0.92
SLM3YDL033C YPR204WQ08995 1032 aa9.29□□□□□ -0.92
SLM3YDL033C HAT1Q12341 374 aa9.29□□□□□ -0.92
SLM3YDL033C MPP10P47083 593 aaKnown RBP9.28□□□□□ -0.92
SLM3YDL033C SYF1Q04048 859 aaPredicted RBP9.28□□□□□ -0.92
SLM3YDL033C MSM1P22438 575 aa9.27□□□□□ -0.93
SLM3YDL033C DUS1P53759 423 aaKnown RBP9.27□□□□□ -0.93
SLM3YDL033C COG8Q04632 607 aa9.27□□□□□ -0.93
SLM3YDL033C SSK22P25390 1331 aaPredicted RBP9.27□□□□□ -0.93
SLM3YDL033C LYS2P07702 1392 aa9.26□□□□□ -0.93
SLM3YDL033C KNS1P32350 737 aaPredicted RBP9.26□□□□□ -0.93
SLM3YDL033C RTR1P40084 226 aaPredicted RBP9.26□□□□□ -0.93
SLM3YDL033C FET4P40988 552 aa9.26□□□□□ -0.93
SLM3YDL033C ZDS1P50111 915 aaKnown RBP9.26□□□□□ -0.93
SLM3YDL033C ZDS2P54786 942 aa9.26□□□□□ -0.93
SLM3YDL033C DPL1Q05567 589 aa9.26□□□□□ -0.93
SLM3YDL033C GAP1P19145 602 aaPredicted RBP9.25□□□□□ -0.93
SLM3YDL033C ETP1P38748 585 aaKnown RBP9.25□□□□□ -0.93
SLM3YDL033C ITC1P53125 1264 aa9.25□□□□□ -0.93
SLM3YDL033C AIM7Q12156 149 aa9.25□□□□□ -0.93
SLM3YDL033C PRD1P25375 712 aa9.24□□□□□ -0.93
SLM3YDL033C GLC3P32775 704 aa9.24□□□□□ -0.93
SLM3YDL033C TIM50Q02776 476 aa9.24□□□□□ -0.93
SLM3YDL033C BMS1Q08965 1183 aaKnown RBP9.24□□□□□ -0.93
SLM3YDL033C FIG2P25653 1609 aa9.23□□□□□ -0.93
SLM3YDL033C COQ4O13525 335 aa9.23□□□□□ -0.93
SLM3YDL033C YBR287WP38355 427 aa9.23□□□□□ -0.93
SLM3YDL033C MAM1P40065 302 aa9.23□□□□□ -0.93
SLM3YDL033C POL32P47110 350 aa9.23□□□□□ -0.93
SLM3YDL033C ESC2Q06340 456 aa9.23□□□□□ -0.93
SLM3YDL033C PKH1Q03407 766 aa9.22□□□□□ -0.93
SLM3YDL033C HKR1P41809 1802 aa9.21□□□□□ -0.93
SLM3YDL033C DAL5P15365 543 aa9.21□□□□□ -0.94
SLM3YDL033C RIX1P38883 763 aaPredicted RBP9.21□□□□□ -0.94
SLM3YDL033C YIL092WP40497 633 aa9.21□□□□□ -0.94
SLM3YDL033C YIL089WP40500 205 aa9.21□□□□□ -0.94
SLM3YDL033C TRM44Q02648 567 aaKnown RBP9.21□□□□□ -0.94
SLM3YDL033C LCD1Q04377 747 aa9.21□□□□□ -0.94
SLM3YDL033C YLR271WQ06152 274 aa9.21□□□□□ -0.94
SLM3YDL033C RNA1P11745 407 aaKnown RBP9.2□□□□□ -0.94
SLM3YDL033C TIF4632P39936 914 aaKnown RBP9.2□□□□□ -0.94
SLM3YDL033C TPM2P40414 161 aa9.2□□□□□ -0.94
SLM3YDL033C PIL1P53252 339 aaKnown RBP9.2□□□□□ -0.94
SLM3YDL033C SMC3P47037 1230 aa9.19□□□□□ -0.94
SLM3YDL033C RSM7P47150 247 aa9.19□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms