RNA–Protein interactions for RNA: YDL008W

APC11, Transcript of Catalytic core subunit, Anaphase-Promoting Complex/Cyclosome (APC/C), yeast

Gene APC11, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC11	YDL008W	MPH3	P0CE00	602 aa		4.17	□□□□□ -1.74
APC11	YDL008W	ARG8	P18544	423 aa		4.17	□□□□□ -1.74
APC11	YDL008W	PRP40	P33203	583 aa	Known RBP	4.17	□□□□□ -1.74
APC11	YDL008W	RIA1	P53893	1110 aa		4.17	□□□□□ -1.74
APC11	YDL008W	MRX10	Q05648	414 aa		4.17	□□□□□ -1.74
APC11	YDL008W	CDC73	Q06697	393 aa		4.17	□□□□□ -1.74
APC11	YDL008W	AI4	P03878	556 aa		4.16	□□□□□ -1.74
APC11	YDL008W	SLD2	P34252	453 aa		4.16	□□□□□ -1.74
APC11	YDL008W	CSE4	P36012	229 aa		4.16	□□□□□ -1.74
APC11	YDL008W	SET4	P42948	560 aa		4.16	□□□□□ -1.74
APC11	YDL008W	RIM21	P48565	533 aa		4.16	□□□□□ -1.74
APC11	YDL008W	SIT4	P20604	311 aa		4.15	□□□□□ -1.75
APC11	YDL008W	RRN6	P32786	894 aa		4.15	□□□□□ -1.75
APC11	YDL008W	TGL4	P36165	910 aa		4.15	□□□□□ -1.75
APC11	YDL008W	RSC30	P38781	883 aa		4.15	□□□□□ -1.75
APC11	YDL008W	NOP7	P53261	605 aa	Known RBP	4.15	□□□□□ -1.75
APC11	YDL008W	FOX2	Q02207	900 aa	Known RBP	4.15	□□□□□ -1.75
APC11	YDL008W	IOC4	Q04213	475 aa		4.15	□□□□□ -1.75
APC11	YDL008W	CSC1	Q06538	782 aa		4.15	□□□□□ -1.75
APC11	YDL008W	LAM6	Q08001	693 aa		4.15	□□□□□ -1.75
APC11	YDL008W	HTA1	P04911	132 aa	Known RBP	4.14	□□□□□ -1.75
APC11	YDL008W	HTA2	P04912	132 aa		4.14	□□□□□ -1.75
APC11	YDL008W	MAK16	P10962	306 aa	Predicted RBP	4.14	□□□□□ -1.75
APC11	YDL008W	PRP45	P28004	379 aa	Predicted RBP	4.14	□□□□□ -1.75
APC11	YDL008W	ULI1	P43604	169 aa		4.14	□□□□□ -1.75
APC11	YDL008W	ALD3	P54114	506 aa		4.14	□□□□□ -1.75
APC11	YDL008W	SRF1	Q12516	437 aa		4.14	□□□□□ -1.75
APC11	YDL008W	RDS2	P19541	446 aa	Known RBP	4.13	□□□□□ -1.75
APC11	YDL008W	YER156C	P40093	338 aa	Known RBP	4.13	□□□□□ -1.75
APC11	YDL008W	KTR7	P40504	517 aa		4.13	□□□□□ -1.75
APC11	YDL008W	SNU71	P53207	620 aa	Known RBP	4.13	□□□□□ -1.75
APC11	YDL008W	ROM2	P51862	1356 aa	Known RBP	4.13	□□□□□ -1.75
APC11	YDL008W	YMR084W	A2P2R3	262 aa		4.12	□□□□□ -1.75
APC11	YDL008W	SLY41	P22215	453 aa		4.12	□□□□□ -1.75
APC11	YDL008W	SAP155	P43612	1002 aa		4.12	□□□□□ -1.75
APC11	YDL008W	DAN4	P47179	1161 aa		4.12	□□□□□ -1.75
APC11	YDL008W	TUM1	Q08686	304 aa	Known RBP	4.12	□□□□□ -1.75
APC11	YDL008W	RAD9	P14737	1309 aa		4.12	□□□□□ -1.75
APC11	YDL008W	CTT1	P06115	562 aa		4.11	□□□□□ -1.75
APC11	YDL008W	NAP1	P25293	417 aa	Known RBP	4.11	□□□□□ -1.75
APC11	YDL008W	SPT5	P27692	1063 aa	Known RBP	4.11	□□□□□ -1.75
APC11	YDL008W	PEP12	P32854	288 aa		4.11	□□□□□ -1.75
APC11	YDL008W	ECM23	Q02710	187 aa		4.11	□□□□□ -1.75
APC11	YDL008W	TFB4	Q12004	338 aa		4.11	□□□□□ -1.75
APC11	YDL008W	SPT7	P35177	1332 aa		4.11	□□□□□ -1.75
APC11	YDL008W	PSK1	P31374	1356 aa		4.11	□□□□□ -1.75
APC11	YDL008W	TRM1	P15565	570 aa	Known RBP	4.1	□□□□□ -1.75
APC11	YDL008W	HEM3	P28789	327 aa		4.1	□□□□□ -1.75
APC11	YDL008W	ISF1	P32488	338 aa		4.1	□□□□□ -1.75
APC11	YDL008W	TPS3	P38426	1054 aa	Known RBP	4.1	□□□□□ -1.75
APC11	YDL008W	YEL023C	P39992	682 aa		4.1	□□□□□ -1.75
APC11	YDL008W	MSN5	P52918	1224 aa		4.1	□□□□□ -1.75
APC11	YDL008W	YBL113C	Q7M4S9	792 aa		4.1	□□□□□ -1.75
APC11	YDL008W	SIS2	P36024	562 aa		4.09	□□□□□ -1.75
APC11	YDL008W	ERP5	P38819	212 aa		4.09	□□□□□ -1.75
APC11	YDL008W	RGA2	Q06407	1009 aa		4.09	□□□□□ -1.75
APC11	YDL008W	ERF2	Q06551	359 aa		4.09	□□□□□ -1.75
APC11	YDL008W	IOC2	Q12072	812 aa		4.09	□□□□□ -1.75
APC11	YDL008W	MCM16	Q12262	181 aa		4.09	□□□□□ -1.75
APC11	YDL008W	TIF6	Q12522	245 aa	Known RBP	4.09	□□□□□ -1.75
APC11	YDL008W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.09	□□□□□ -1.75
APC11	YDL008W	YRF1-3	P0CX14	1859 aa		4.08	□□□□□ -1.76
APC11	YDL008W	YRF1-7	P0CX15	1859 aa		4.08	□□□□□ -1.76
APC11	YDL008W	YEF3	P16521	1044 aa	Known RBP	4.08	□□□□□ -1.76
APC11	YDL008W	UBX7	P38349	436 aa		4.08	□□□□□ -1.76
APC11	YDL008W	YRF1-6	P53819	1859 aa		4.08	□□□□□ -1.76
APC11	YDL008W	YRR1	Q12172	810 aa		4.08	□□□□□ -1.76
APC11	YDL008W	THS1	P04801	734 aa	Known RBP	4.07	□□□□□ -1.76
APC11	YDL008W	RPP1B	P10622	106 aa	Known RBP	4.07	□□□□□ -1.76
APC11	YDL008W	KEX2	P13134	814 aa		4.07	□□□□□ -1.76
APC11	YDL008W	NCS6	P53088	359 aa		4.07	□□□□□ -1.76
APC11	YDL008W	YNL115C	P53925	644 aa		4.07	□□□□□ -1.76
APC11	YDL008W	APC1	P53886	1748 aa		4.07	□□□□□ -1.76
APC11	YDL008W	MHP1	P43638	1398 aa		4.06	□□□□□ -1.76
APC11	YDL008W	MID1	P41821	548 aa		4.06	□□□□□ -1.76
APC11	YDL008W	RRP15	Q06511	250 aa	Predicted RBP	4.06	□□□□□ -1.76
APC11	YDL008W	TY4B-H	P0C2J7	1802 aa		4.06	□□□□□ -1.76
APC11	YDL008W	TY4B-J	P47024	1803 aa		4.06	□□□□□ -1.76
APC11	YDL008W	ATE1	P16639	503 aa		4.05	□□□□□ -1.76
APC11	YDL008W	STM1	P39015	273 aa	Known RBP	4.05	□□□□□ -1.76
APC11	YDL008W	EMP47	P43555	445 aa		4.05	□□□□□ -1.76
APC11	YDL008W	NAF1	P53919	492 aa	Known RBP	4.05	□□□□□ -1.76
APC11	YDL008W	MSB4	Q12317	492 aa		4.05	□□□□□ -1.76
APC11	YDL008W	TOR2	P32600	2474 aa	Known RBP	4.05	□□□□□ -1.76
APC11	YDL008W	TRP5	P00931	707 aa	Known RBP	4.04	□□□□□ -1.76
APC11	YDL008W	CUP1-1	P0CX80	61 aa		4.04	□□□□□ -1.76
APC11	YDL008W	CUP1-2	P0CX81	61 aa		4.04	□□□□□ -1.76
APC11	YDL008W	GAL2	P13181	574 aa		4.04	□□□□□ -1.76
APC11	YDL008W	DLD1	P32891	587 aa		4.04	□□□□□ -1.76
APC11	YDL008W	GRS1	P38088	690 aa	Known RBP	4.04	□□□□□ -1.76
APC11	YDL008W	TAF5	P38129	798 aa		4.04	□□□□□ -1.76
APC11	YDL008W	YHL050C	P38721	697 aa		4.04	□□□□□ -1.76
APC11	YDL008W	YHR219W	P38900	624 aa		4.04	□□□□□ -1.76
APC11	YDL008W	YPP1	P46951	817 aa		4.04	□□□□□ -1.76
APC11	YDL008W	RTF1	P53064	558 aa		4.04	□□□□□ -1.76
APC11	YDL008W	KIN4	Q01919	800 aa		4.04	□□□□□ -1.76
APC11	YDL008W	KAR5	Q04746	504 aa		4.04	□□□□□ -1.76
APC11	YDL008W	DPL1	Q05567	589 aa		4.04	□□□□□ -1.76
APC11	YDL008W	MPC54	Q08550	464 aa		4.04	□□□□□ -1.76
APC11	YDL008W	NCR1	Q12200	1170 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 79.1 ms