RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP43YCR035C MRP7P12687 371 aa9.21□□□□□ -0.94
RRP43YCR035C SER1P33330 395 aaKnown RBP9.21□□□□□ -0.94
RRP43YCR035C YBL086CP38177 466 aa9.21□□□□□ -0.94
RRP43YCR035C YPP1P46951 817 aa9.21□□□□□ -0.94
RRP43YCR035C ALD2P47771 506 aa9.21□□□□□ -0.94
RRP43YCR035C CTH1P47976 325 aa9.21□□□□□ -0.94
RRP43YCR035C YGR122WP53272 402 aa9.21□□□□□ -0.94
RRP43YCR035C CSI1Q04368 295 aa9.21□□□□□ -0.94
RRP43YCR035C YGL082WP53155 381 aa9.2□□□□□ -0.94
RRP43YCR035C DNM1P54861 757 aa9.2□□□□□ -0.94
RRP43YCR035C YDR306CQ06640 478 aa9.2□□□□□ -0.94
RRP43YCR035C BUG1Q12191 341 aa9.2□□□□□ -0.94
RRP43YCR035C NYV1Q12255 253 aa9.2□□□□□ -0.94
RRP43YCR035C RIM15P43565 1770 aa9.19□□□□□ -0.94
RRP43YCR035C FPR3P38911 411 aaKnown RBP9.19□□□□□ -0.94
RRP43YCR035C TRP5P00931 707 aaKnown RBP9.18□□□□□ -0.94
RRP43YCR035C SSA2P10592 639 aaKnown RBP9.18□□□□□ -0.94
RRP43YCR035C ARG8P18544 423 aa9.18□□□□□ -0.94
RRP43YCR035C RAD24P32641 659 aa9.18□□□□□ -0.94
RRP43YCR035C UGA2P38067 497 aa9.18□□□□□ -0.94
RRP43YCR035C GTT3P39996 337 aa9.18□□□□□ -0.94
RRP43YCR035C CST6P40535 587 aa9.18□□□□□ -0.94
RRP43YCR035C YPR204WQ08995 1032 aa9.18□□□□□ -0.94
RRP43YCR035C SWC3P31376 625 aa9.17□□□□□ -0.94
RRP43YCR035C NUP133P36161 1157 aa9.17□□□□□ -0.94
RRP43YCR035C VPS29P38759 282 aa9.17□□□□□ -0.94
RRP43YCR035C POL32P47110 350 aa9.17□□□□□ -0.94
RRP43YCR035C SWI1P09547 1314 aa9.16□□□□□ -0.94
RRP43YCR035C ALD3P54114 506 aa9.16□□□□□ -0.94
RRP43YCR035C PUF6Q04373 656 aaKnown RBP9.16□□□□□ -0.94
RRP43YCR035C UTP22P53254 1237 aaPredicted RBP9.15□□□□□ -0.94
RRP43YCR035C PKH1Q03407 766 aa9.15□□□□□ -0.94
RRP43YCR035C CTI6Q08923 506 aa9.15□□□□□ -0.94
RRP43YCR035C RPS19AP07280 144 aaKnown RBP9.14□□□□□ -0.95
RRP43YCR035C RPS19BP07281 144 aaPredicted RBP9.14□□□□□ -0.95
RRP43YCR035C YNG2P38806 282 aaKnown RBP9.14□□□□□ -0.95
RRP43YCR035C YJR008WP47085 338 aa9.14□□□□□ -0.95
RRP43YCR035C HPC2Q01448 625 aa9.13□□□□□ -0.95
RRP43YCR035C LPD1P09624 499 aaKnown RBP9.12□□□□□ -0.95
RRP43YCR035C TOS1P38288 455 aa9.11□□□□□ -0.95
RRP43YCR035C BOI2P39969 1040 aa9.11□□□□□ -0.95
RRP43YCR035C SPO1P53541 631 aa9.11□□□□□ -0.95
RRP43YCR035C FCP1Q03254 732 aa9.11□□□□□ -0.95
RRP43YCR035C MAK11P20484 414 aaKnown RBP9.1□□□□□ -0.95
RRP43YCR035C UBP12P39538 1254 aa9.1□□□□□ -0.95
RRP43YCR035C RIX7Q07844 837 aaKnown RBP9.1□□□□□ -0.95
RRP43YCR035C ILV3P39522 585 aaKnown RBP9.09□□□□□ -0.95
RRP43YCR035C YMR1P47147 688 aaKnown RBP RIP-Chip data9.09□□□□□ -0.95not detected
RRP43YCR035C ITC1P53125 1264 aa9.09□□□□□ -0.95
RRP43YCR035C RAT1Q02792 1006 aaKnown RBP9.09□□□□□ -0.95
RRP43YCR035C SET1P38827 1080 aaKnown RBP9.08□□□□□ -0.96
RRP43YCR035C PSH1Q12161 406 aa9.08□□□□□ -0.96
RRP43YCR035C HAT1Q12341 374 aa9.08□□□□□ -0.96
RRP43YCR035C YAP5P40574 245 aa9.07□□□□□ -0.96
RRP43YCR035C NOP2P40991 618 aaKnown RBP9.06□□□□□ -0.96
RRP43YCR035C HXT10P43581 546 aa9.06□□□□□ -0.96
RRP43YCR035C SUP35P05453 685 aaKnown RBP9.05□□□□□ -0.96
RRP43YCR035C GCD7P32502 381 aaPredicted RBP9.05□□□□□ -0.96
RRP43YCR035C STS1P38637 319 aa9.04□□□□□ -0.96
RRP43YCR035C NMD2P38798 1089 aaKnown RBP9.04□□□□□ -0.96
RRP43YCR035C HGH1P48362 394 aaKnown RBP9.04□□□□□ -0.96
RRP43YCR035C DIB1Q06819 143 aaPredicted RBP9.04□□□□□ -0.96
RRP43YCR035C BDF2Q07442 638 aa9.04□□□□□ -0.96
RRP43YCR035C YOR238WQ08634 303 aa9.04□□□□□ -0.96
RRP43YCR035C MTC5Q03897 1148 aa9.03□□□□□ -0.96
RRP43YCR035C SSK22P25390 1331 aaPredicted RBP9.03□□□□□ -0.96
RRP43YCR035C SNU66Q12420 587 aaPredicted RBP9.02□□□□□ -0.97
RRP43YCR035C CAF20P12962 161 aaKnown RBP9.01□□□□□ -0.97
RRP43YCR035C DBP1P24784 617 aaKnown RBP9.01□□□□□ -0.97
RRP43YCR035C MSN5P52918 1224 aa9.01□□□□□ -0.97
RRP43YCR035C IRC3Q06683 689 aa9.01□□□□□ -0.97
RRP43YCR035C PFF1P38244 976 aa9□□□□□ -0.97
RRP43YCR035C RFC1P38630 861 aaKnown RBP9□□□□□ -0.97
RRP43YCR035C SSF1P38789 453 aaPredicted RBP9□□□□□ -0.97
RRP43YCR035C BDP1P46678 594 aa9□□□□□ -0.97
RRP43YCR035C EAF6P47128 113 aa9□□□□□ -0.97
RRP43YCR035C NCB2Q92317 146 aa9□□□□□ -0.97
RRP43YCR035C UTP10P42945 1769 aaKnown RBP8.99□□□□□ -0.97
RRP43YCR035C MST1P07236 462 aa8.99□□□□□ -0.97
RRP43YCR035C SLA1P32790 1244 aa8.99□□□□□ -0.97
RRP43YCR035C CWH41P53008 833 aa8.99□□□□□ -0.97
RRP43YCR035C SYF1Q04048 859 aaPredicted RBP8.99□□□□□ -0.97
RRP43YCR035C FRD1P32614 470 aaKnown RBP8.98□□□□□ -0.97
RRP43YCR035C RPN1P38764 993 aaKnown RBP8.98□□□□□ -0.97
RRP43YCR035C NKP2Q06162 153 aa8.98□□□□□ -0.97
RRP43YCR035C RPC31P17890 251 aa8.97□□□□□ -0.97
RRP43YCR035C SIT4P20604 311 aa8.97□□□□□ -0.97
RRP43YCR035C NGR1P32831 672 aaKnown RBP8.97□□□□□ -0.97
RRP43YCR035C UBP16Q02863 499 aa8.97□□□□□ -0.97
RRP43YCR035C ECM16Q04217 1267 aaKnown RBP8.97□□□□□ -0.97
RRP43YCR035C SAC3P46674 1301 aa8.97□□□□□ -0.97
RRP43YCR035C SMY1P32364 656 aaKnown RBP8.96□□□□□ -0.98
RRP43YCR035C YKL222CP35995 705 aa8.96□□□□□ -0.98
RRP43YCR035C ERT1P38140 529 aa8.96□□□□□ -0.98
RRP43YCR035C SAS4Q04003 481 aa8.96□□□□□ -0.98
RRP43YCR035C GYP5Q12344 894 aa8.96□□□□□ -0.98
RRP43YCR035C DPH6Q12429 685 aa8.96□□□□□ -0.98
RRP43YCR035C CTT1P06115 562 aa8.95□□□□□ -0.98
RRP43YCR035C SEC18P18759 758 aaKnown RBP8.95□□□□□ -0.98
RRP43YCR035C COQ8P27697 501 aa8.95□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms