RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	DIB1	Q06819	143 aa	Predicted RBP	7.29	□□□□□ -1.24
ATG12	YBR217W	HAT1	Q12341	374 aa		7.29	□□□□□ -1.24
ATG12	YBR217W	SWI1	P09547	1314 aa		7.28	□□□□□ -1.24
ATG12	YBR217W	FAS2	P19097	1887 aa	Known RBP	7.28	□□□□□ -1.24
ATG12	YBR217W	MRP7	P12687	371 aa		7.28	□□□□□ -1.24
ATG12	YBR217W	CST6	P40535	587 aa		7.28	□□□□□ -1.24
ATG12	YBR217W	YGR122W	P53272	402 aa		7.28	□□□□□ -1.24
ATG12	YBR217W	ERO1	Q03103	563 aa		7.28	□□□□□ -1.24
ATG12	YBR217W	YLR271W	Q06152	274 aa		7.28	□□□□□ -1.24
ATG12	YBR217W	YDR306C	Q06640	478 aa		7.28	□□□□□ -1.24
ATG12	YBR217W	TOP1	P04786	769 aa		7.27	□□□□□ -1.25
ATG12	YBR217W	SIT4	P20604	311 aa		7.27	□□□□□ -1.25
ATG12	YBR217W	ICL1	P28240	557 aa	Predicted RBP	7.27	□□□□□ -1.25
ATG12	YBR217W	FRD1	P32614	470 aa	Known RBP	7.27	□□□□□ -1.25
ATG12	YBR217W	NUP133	P36161	1157 aa		7.27	□□□□□ -1.25
ATG12	YBR217W	RPN1	P38764	993 aa	Known RBP	7.27	□□□□□ -1.25
ATG12	YBR217W	CDC45	Q08032	650 aa		7.27	□□□□□ -1.25
ATG12	YBR217W	RVB2	Q12464	471 aa	Known RBP	7.27	□□□□□ -1.25
ATG12	YBR217W	UBP16	Q02863	499 aa		7.26	□□□□□ -1.25
ATG12	YBR217W	SYF1	Q04048	859 aa	Predicted RBP	7.26	□□□□□ -1.25
ATG12	YBR217W	SSK22	P25390	1331 aa	Predicted RBP	7.26	□□□□□ -1.25
ATG12	YBR217W	SWC3	P31376	625 aa		7.25	□□□□□ -1.25
ATG12	YBR217W	YJR008W	P47085	338 aa		7.25	□□□□□ -1.25
ATG12	YBR217W	RAD24	P32641	659 aa		7.24	□□□□□ -1.25
ATG12	YBR217W	YKU70	P32807	602 aa		7.24	□□□□□ -1.25
ATG12	YBR217W	SAS4	Q04003	481 aa		7.24	□□□□□ -1.25
ATG12	YBR217W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	7.23	□□□□□ -1.25	not detected
ATG12	YBR217W	ITC1	P53125	1264 aa		7.23	□□□□□ -1.25
ATG12	YBR217W	NOP8	Q08287	484 aa	Predicted RBP	7.23	□□□□□ -1.25
ATG12	YBR217W	RET1	P22276	1149 aa	Known RBP	7.22	□□□□□ -1.25
ATG12	YBR217W	PSH1	Q12161	406 aa		7.22	□□□□□ -1.25
ATG12	YBR217W	DAL5	P15365	543 aa		7.21	□□□□□ -1.26
ATG12	YBR217W	PRS1	P32895	427 aa	Known RBP	7.21	□□□□□ -1.26
ATG12	YBR217W	SLI15	P38283	698 aa		7.21	□□□□□ -1.26
ATG12	YBR217W	SET1	P38827	1080 aa	Known RBP	7.21	□□□□□ -1.26
ATG12	YBR217W	SHC1	P39000	512 aa		7.21	□□□□□ -1.26
ATG12	YBR217W	HXT10	P43581	546 aa		7.21	□□□□□ -1.26
ATG12	YBR217W	YPP1	P46951	817 aa		7.21	□□□□□ -1.26
ATG12	YBR217W	FPK1	P53739	893 aa		7.21	□□□□□ -1.26
ATG12	YBR217W	CSI1	Q04368	295 aa		7.21	□□□□□ -1.26
ATG12	YBR217W	ATG20	Q07528	640 aa		7.21	□□□□□ -1.26
ATG12	YBR217W	MAK21	Q12176	1025 aa	Known RBP	7.21	□□□□□ -1.26
ATG12	YBR217W	GRX6	Q12438	231 aa		7.21	□□□□□ -1.26
ATG12	YBR217W	HKR1	P41809	1802 aa		7.2	□□□□□ -1.26
ATG12	YBR217W	UBP12	P39538	1254 aa		7.2	□□□□□ -1.26
ATG12	YBR217W	FUN12	P39730	1002 aa	Known RBP	7.19	□□□□□ -1.26
ATG12	YBR217W	ICP55	P40051	511 aa		7.19	□□□□□ -1.26
ATG12	YBR217W	YIL092W	P40497	633 aa		7.19	□□□□□ -1.26
ATG12	YBR217W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	7.19	□□□□□ -1.26	not detected
ATG12	YBR217W	DPL1	Q05567	589 aa		7.19	□□□□□ -1.26
ATG12	YBR217W	DPH6	Q12429	685 aa		7.19	□□□□□ -1.26
ATG12	YBR217W	NGR1	P32831	672 aa	Known RBP	7.18	□□□□□ -1.26
ATG12	YBR217W	TFA1	P36100	482 aa		7.18	□□□□□ -1.26
ATG12	YBR217W	SET4	P42948	560 aa		7.18	□□□□□ -1.26
ATG12	YBR217W	TRP5	P00931	707 aa	Known RBP	7.17	□□□□□ -1.26
ATG12	YBR217W	KRE2	P27809	442 aa		7.17	□□□□□ -1.26
ATG12	YBR217W	MGM1	P32266	881 aa		7.17	□□□□□ -1.26
ATG12	YBR217W	BOI2	P39969	1040 aa		7.17	□□□□□ -1.26
ATG12	YBR217W	YRB30	P53107	440 aa	Predicted RBP	7.17	□□□□□ -1.26
ATG12	YBR217W	RPT4	P53549	437 aa	Known RBP	7.17	□□□□□ -1.26
ATG12	YBR217W	PUS5	Q06244	254 aa		7.17	□□□□□ -1.26
ATG12	YBR217W	THI3	Q07471	609 aa		7.17	□□□□□ -1.26
ATG12	YBR217W	THS1	P04801	734 aa	Known RBP	7.16	□□□□□ -1.26
ATG12	YBR217W	RPS9B	P05755	195 aa	Known RBP	7.16	□□□□□ -1.26
ATG12	YBR217W	RPS19A	P07280	144 aa	Known RBP	7.16	□□□□□ -1.26
ATG12	YBR217W	RPS19B	P07281	144 aa	Predicted RBP	7.16	□□□□□ -1.26
ATG12	YBR217W	GAP1	P19145	602 aa	Predicted RBP	7.16	□□□□□ -1.26
ATG12	YBR217W	SPL2	P38839	148 aa		7.16	□□□□□ -1.26
ATG12	YBR217W	MTC5	Q03897	1148 aa		7.16	□□□□□ -1.26
ATG12	YBR217W	GAS5	Q08193	484 aa		7.16	□□□□□ -1.26
ATG12	YBR217W	SAC3	P46674	1301 aa		7.16	□□□□□ -1.26
ATG12	YBR217W	RAD2	P07276	1031 aa		7.15	□□□□□ -1.26
ATG12	YBR217W	SSA4	P22202	642 aa	Known RBP	7.15	□□□□□ -1.26
ATG12	YBR217W	MSM1	P22438	575 aa		7.15	□□□□□ -1.26
ATG12	YBR217W	SNU66	Q12420	587 aa	Predicted RBP	7.15	□□□□□ -1.26
ATG12	YBR217W	SUP35	P05453	685 aa	Known RBP	7.14	□□□□□ -1.27
ATG12	YBR217W	PEX21	P50091	288 aa		7.14	□□□□□ -1.27
ATG12	YBR217W	SRC1	Q03707	834 aa		7.14	□□□□□ -1.27
ATG12	YBR217W	DUR1,2	P32528	1835 aa	Known RBP	7.13	□□□□□ -1.27
ATG12	YBR217W	RTG2	P32608	588 aa	Known RBP	7.13	□□□□□ -1.27
ATG12	YBR217W	SLA1	P32790	1244 aa		7.13	□□□□□ -1.27
ATG12	YBR217W	YNG2	P38806	282 aa	Known RBP	7.13	□□□□□ -1.27
ATG12	YBR217W	GSM1	P42950	618 aa		7.13	□□□□□ -1.27
ATG12	YBR217W	YLR278C	Q05854	1341 aa		7.12	□□□□□ -1.27
ATG12	YBR217W	AFG2	P32794	780 aa		7.12	□□□□□ -1.27
ATG12	YBR217W	TIF4632	P39936	914 aa	Known RBP	7.12	□□□□□ -1.27
ATG12	YBR217W	FET4	P40988	552 aa		7.12	□□□□□ -1.27
ATG12	YBR217W	TRM44	Q02648	567 aa	Known RBP	7.12	□□□□□ -1.27
ATG12	YBR217W	IRC4	Q03036	179 aa		7.12	□□□□□ -1.27
ATG12	YBR217W	TOS4	Q06266	489 aa		7.12	□□□□□ -1.27
ATG12	YBR217W	RRG1	Q12167	365 aa	Predicted RBP	7.12	□□□□□ -1.27
ATG12	YBR217W	LCB1	P25045	558 aa	Known RBP	7.11	□□□□□ -1.27
ATG12	YBR217W	GLC3	P32775	704 aa		7.11	□□□□□ -1.27
ATG12	YBR217W	ILV3	P39522	585 aa	Known RBP	7.11	□□□□□ -1.27
ATG12	YBR217W	VPS4	P52917	437 aa		7.11	□□□□□ -1.27
ATG12	YBR217W	SPO1	P53541	631 aa		7.11	□□□□□ -1.27
ATG12	YBR217W	UBX2	Q04228	584 aa		7.11	□□□□□ -1.27
ATG12	YBR217W	AIM7	Q12156	149 aa		7.11	□□□□□ -1.27
ATG12	YBR217W	TOM1	Q03280	3268 aa		7.1	□□□□□ -1.27
ATG12	YBR217W	PUF6	Q04373	656 aa	Known RBP	7.1	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms