RNA–Protein interactions for RNA: YBR082C

UBC4, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene UBC4, Length 447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC4YBR082C LYS4P49367 693 aaPredicted RBP6.55□□□□□ -1.36
UBC4YBR082C YLR271WQ06152 274 aa6.55□□□□□ -1.36
UBC4YBR082C NYV1Q12255 253 aa6.55□□□□□ -1.36
UBC4YBR082C UBP12P39538 1254 aa6.54□□□□□ -1.36
UBC4YBR082C HGH1P48362 394 aaKnown RBP6.54□□□□□ -1.36
UBC4YBR082C GCD7P32502 381 aaPredicted RBP6.53□□□□□ -1.36
UBC4YBR082C BDF1P35817 686 aa6.53□□□□□ -1.36
UBC4YBR082C RFC1P38630 861 aaKnown RBP6.53□□□□□ -1.36
UBC4YBR082C PSH1Q12161 406 aa6.53□□□□□ -1.36
UBC4YBR082C SUP35P05453 685 aaKnown RBP6.52□□□□□ -1.37
UBC4YBR082C DCD1P06773 312 aa6.52□□□□□ -1.37
UBC4YBR082C SET1P38827 1080 aaKnown RBP6.52□□□□□ -1.37
UBC4YBR082C BDP1P46678 594 aa6.52□□□□□ -1.37
UBC4YBR082C ALD2P47771 506 aa6.52□□□□□ -1.37
UBC4YBR082C ITC1P53125 1264 aa6.52□□□□□ -1.37
UBC4YBR082C NCB2Q92317 146 aa6.52□□□□□ -1.37
UBC4YBR082C SSF1P38789 453 aaPredicted RBP6.51□□□□□ -1.37
UBC4YBR082C UTP22P53254 1237 aaPredicted RBP6.51□□□□□ -1.37
UBC4YBR082C ALD3P54114 506 aa6.51□□□□□ -1.37
UBC4YBR082C FCP1Q03254 732 aa6.51□□□□□ -1.37
UBC4YBR082C NKP2Q06162 153 aa6.51□□□□□ -1.37
UBC4YBR082C YBL086CP38177 466 aa6.5□□□□□ -1.37
UBC4YBR082C HPC2Q01448 625 aa6.5□□□□□ -1.37
UBC4YBR082C RAT1Q02792 1006 aaKnown RBP6.5□□□□□ -1.37
UBC4YBR082C CTI6Q08923 506 aa6.5□□□□□ -1.37
UBC4YBR082C RAD50P12753 1312 aa6.5□□□□□ -1.37
UBC4YBR082C SSA2P10592 639 aaKnown RBP6.49□□□□□ -1.37
UBC4YBR082C GTT3P39996 337 aa6.49□□□□□ -1.37
UBC4YBR082C CTH1P47976 325 aa6.49□□□□□ -1.37
UBC4YBR082C MTC5Q03897 1148 aa6.49□□□□□ -1.37
UBC4YBR082C HAT1Q12341 374 aa6.49□□□□□ -1.37
UBC4YBR082C SNU66Q12420 587 aaPredicted RBP6.49□□□□□ -1.37
UBC4YBR082C UGA2P38067 497 aa6.48□□□□□ -1.37
UBC4YBR082C SSK22P25390 1331 aaPredicted RBP6.48□□□□□ -1.37
UBC4YBR082C PDR18P53756 1333 aa6.48□□□□□ -1.37
UBC4YBR082C CDC16P09798 840 aa6.47□□□□□ -1.37
UBC4YBR082C HXT10P43581 546 aa6.47□□□□□ -1.37
UBC4YBR082C DIB1Q06819 143 aaPredicted RBP6.47□□□□□ -1.37
UBC4YBR082C SLA1P32790 1244 aa6.46□□□□□ -1.38
UBC4YBR082C MLC1P53141 149 aa6.46□□□□□ -1.38
UBC4YBR082C RIX7Q07844 837 aaKnown RBP6.46□□□□□ -1.38
UBC4YBR082C SAC3P46674 1301 aa6.46□□□□□ -1.38
UBC4YBR082C VAS1P07806 1104 aaKnown RBP6.45□□□□□ -1.38
UBC4YBR082C ECM21P38167 1117 aaKnown RBP6.45□□□□□ -1.38
UBC4YBR082C TOS1P38288 455 aa6.45□□□□□ -1.38
UBC4YBR082C RMD1Q03441 430 aa6.45□□□□□ -1.38
UBC4YBR082C BDF2Q07442 638 aa6.45□□□□□ -1.38
UBC4YBR082C GYP5Q12344 894 aa6.45□□□□□ -1.38
UBC4YBR082C NOT3P06102 836 aaKnown RBP6.44□□□□□ -1.38
UBC4YBR082C YGL242CP53066 181 aa6.44□□□□□ -1.38
UBC4YBR082C IRC3Q06683 689 aa6.44□□□□□ -1.38
UBC4YBR082C BRN1P38170 754 aa6.43□□□□□ -1.38
UBC4YBR082C GCR2Q01722 534 aa6.43□□□□□ -1.38
UBC4YBR082C BRE1Q07457 700 aaKnown RBP6.43□□□□□ -1.38
UBC4YBR082C RRI2Q12348 645 aa6.43□□□□□ -1.38
UBC4YBR082C SEC18P18759 758 aaKnown RBP6.42□□□□□ -1.38
UBC4YBR082C NGR1P32831 672 aaKnown RBP6.42□□□□□ -1.38
UBC4YBR082C DLD1P32891 587 aa6.42□□□□□ -1.38
UBC4YBR082C YGL015CP33199 130 aa6.42□□□□□ -1.38
UBC4YBR082C YIR014WP40570 242 aa6.42□□□□□ -1.38
UBC4YBR082C UBP16Q02863 499 aa6.42□□□□□ -1.38
UBC4YBR082C SRC1Q03707 834 aa6.42□□□□□ -1.38
UBC4YBR082C SYF1Q04048 859 aaPredicted RBP6.42□□□□□ -1.38
UBC4YBR082C MRPL32P25348 183 aa6.41□□□□□ -1.38
UBC4YBR082C KTR3P38130 404 aaPredicted RBP6.41□□□□□ -1.38
UBC4YBR082C RPN1P38764 993 aaKnown RBP6.41□□□□□ -1.38
UBC4YBR082C ALO1P54783 526 aaKnown RBP6.41□□□□□ -1.38
UBC4YBR082C SAS4Q04003 481 aa6.41□□□□□ -1.38
UBC4YBR082C FPR4Q06205 392 aaPredicted RBP6.41□□□□□ -1.38
UBC4YBR082C DPH6Q12429 685 aa6.41□□□□□ -1.38
UBC4YBR082C ADR1P07248 1323 aa6.41□□□□□ -1.38
UBC4YBR082C PMD1P32634 1753 aa6.4□□□□□ -1.38
UBC4YBR082C AI2P03876 854 aa6.4□□□□□ -1.38
UBC4YBR082C MGM1P32266 881 aa6.4□□□□□ -1.38
UBC4YBR082C FRD1P32614 470 aaKnown RBP6.4□□□□□ -1.38
UBC4YBR082C PFF1P38244 976 aa6.4□□□□□ -1.38
UBC4YBR082C MSN5P52918 1224 aa6.4□□□□□ -1.38
UBC4YBR082C MRPS35P53292 345 aa6.4□□□□□ -1.38
UBC4YBR082C YNL193WP53870 558 aa6.4□□□□□ -1.38
UBC4YBR082C RPN7Q06103 429 aaKnown RBP6.4□□□□□ -1.38
UBC4YBR082C THI3Q07471 609 aa6.4□□□□□ -1.38
UBC4YBR082C RIM20Q12033 661 aa6.4□□□□□ -1.38
UBC4YBR082C CAF20P12962 161 aaKnown RBP6.39□□□□□ -1.39
UBC4YBR082C KTR1P27810 393 aaKnown RBP6.39□□□□□ -1.39
UBC4YBR082C PBY1P38254 753 aa6.39□□□□□ -1.39
UBC4YBR082C STM1P39015 273 aaKnown RBP6.39□□□□□ -1.39
UBC4YBR082C HXT13P39924 564 aa6.39□□□□□ -1.39
UBC4YBR082C ICP55P40051 511 aa6.39□□□□□ -1.39
UBC4YBR082C HXT17P53631 564 aa6.39□□□□□ -1.39
UBC4YBR082C POM152P39685 1337 aa6.39□□□□□ -1.39
UBC4YBR082C PIF1P07271 859 aa6.38□□□□□ -1.39
UBC4YBR082C SIT4P20604 311 aa6.38□□□□□ -1.39
UBC4YBR082C NUG1P40010 520 aaKnown RBP6.38□□□□□ -1.39
UBC4YBR082C RLF2Q12495 606 aa6.38□□□□□ -1.39
UBC4YBR082C DUR1,2P32528 1835 aaKnown RBP6.37□□□□□ -1.39
UBC4YBR082C SMY1P32364 656 aaKnown RBP6.37□□□□□ -1.39
UBC4YBR082C OPY1P38271 328 aa6.37□□□□□ -1.39
UBC4YBR082C OSH3P38713 996 aaKnown RBP6.37□□□□□ -1.39
UBC4YBR082C EPS1P40557 701 aa6.37□□□□□ -1.39
UBC4YBR082C KRI1P42846 591 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms