RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W STB5P38699 743 aa1.34□□□□□ -2.2
UTP20YBL004W RSC8P43609 557 aaKnown RBP1.34□□□□□ -2.2
UTP20YBL004W GAL2P13181 574 aa1.34□□□□□ -2.2
UTP20YBL004W PDR3P33200 976 aa1.34□□□□□ -2.2
UTP20YBL004W YNR061CP53747 219 aa1.34□□□□□ -2.2
UTP20YBL004W MSM1P22438 575 aa1.34□□□□□ -2.2
UTP20YBL004W YFR016CP43597 1233 aaKnown RBP1.34□□□□□ -2.2
UTP20YBL004W HKR1P41809 1802 aa1.33□□□□□ -2.2
UTP20YBL004W IXR1P33417 597 aa1.33□□□□□ -2.2
UTP20YBL004W RIA1P53893 1110 aa1.33□□□□□ -2.2
UTP20YBL004W NUP145P49687 1317 aa1.33□□□□□ -2.2
UTP20YBL004W YGR117CP53270 476 aa1.33□□□□□ -2.2
UTP20YBL004W CTF4Q01454 927 aa1.33□□□□□ -2.2
UTP20YBL004W GAS5Q08193 484 aa1.33□□□□□ -2.2
UTP20YBL004W GRS1P38088 690 aaKnown RBP1.33□□□□□ -2.2
UTP20YBL004W HUL4P40985 892 aa1.33□□□□□ -2.2
UTP20YBL004W MDM1Q01846 1127 aa1.33□□□□□ -2.2
UTP20YBL004W YMR206WQ03695 313 aa1.33□□□□□ -2.2
UTP20YBL004W RTC1Q08281 1341 aa1.33□□□□□ -2.2
UTP20YBL004W YKL133CP36066 463 aa1.33□□□□□ -2.2
UTP20YBL004W SLI15P38283 698 aa1.33□□□□□ -2.2
UTP20YBL004W NET1P47035 1189 aa1.33□□□□□ -2.2
UTP20YBL004W YDR344CQ05510 147 aa1.33□□□□□ -2.2
UTP20YBL004W MDM20Q12387 796 aaKnown RBP1.33□□□□□ -2.2
UTP20YBL004W SSM4P40318 1319 aa1.32□□□□□ -2.2
UTP20YBL004W ALD4P46367 519 aaKnown RBP1.32□□□□□ -2.2
UTP20YBL004W FAA4P47912 694 aaKnown RBP1.32□□□□□ -2.2
UTP20YBL004W RAM1P22007 431 aa1.32□□□□□ -2.2
UTP20YBL004W CPS1P27614 576 aa1.32□□□□□ -2.2
UTP20YBL004W MCM6P53091 1017 aaKnown RBP1.32□□□□□ -2.2
UTP20YBL004W YAF9P53930 226 aa1.32□□□□□ -2.2
UTP20YBL004W GRE2Q12068 342 aaKnown RBP1.32□□□□□ -2.2
UTP20YBL004W YDR034W-BQ6Q5X2 51 aa1.32□□□□□ -2.2
UTP20YBL004W ULP1Q02724 621 aa1.32□□□□□ -2.2
UTP20YBL004W SKY1Q03656 742 aa1.32□□□□□ -2.2
UTP20YBL004W PMD1P32634 1753 aa1.31□□□□□ -2.2
UTP20YBL004W PTK2P47116 818 aaKnown RBP1.31□□□□□ -2.2
UTP20YBL004W LSB6P42951 607 aa1.31□□□□□ -2.2
UTP20YBL004W VPS62P53285 467 aa1.31□□□□□ -2.2
UTP20YBL004W MGA2P40578 1113 aa1.31□□□□□ -2.2
UTP20YBL004W YPR084WQ06821 456 aa1.31□□□□□ -2.2
UTP20YBL004W PSF3Q12146 194 aa1.31□□□□□ -2.2
UTP20YBL004W DBP1P24784 617 aaKnown RBP1.3□□□□□ -2.2
UTP20YBL004W PRP45P28004 379 aaPredicted RBP1.3□□□□□ -2.2
UTP20YBL004W HXT5P38695 592 aa1.3□□□□□ -2.2
UTP20YBL004W CHS7P38843 316 aa1.3□□□□□ -2.2
UTP20YBL004W AHC1Q12433 566 aa1.3□□□□□ -2.2
UTP20YBL004W YML020WQ03722 664 aa1.3□□□□□ -2.2
UTP20YBL004W MFB1Q04922 465 aa1.3□□□□□ -2.2
UTP20YBL004W COBP00163 385 aa1.3□□□□□ -2.2
UTP20YBL004W MAP2P38174 421 aaKnown RBP1.3□□□□□ -2.2
UTP20YBL004W ERG7P38604 731 aa1.3□□□□□ -2.2
UTP20YBL004W RTR1P40084 226 aaPredicted RBP1.3□□□□□ -2.2
UTP20YBL004W YJL007CP47080 104 aa1.3□□□□□ -2.2
UTP20YBL004W ESC2Q06340 456 aa1.3□□□□□ -2.2
UTP20YBL004W THS1P04801 734 aaKnown RBP1.3□□□□□ -2.2
UTP20YBL004W YGR035CP53222 116 aa1.3□□□□□ -2.2
UTP20YBL004W IOC4Q04213 475 aa1.3□□□□□ -2.2
UTP20YBL004W YKU70P32807 602 aa1.29□□□□□ -2.2
UTP20YBL004W SER1P33330 395 aaKnown RBP1.29□□□□□ -2.2
UTP20YBL004W LAM4P38800 1345 aa1.29□□□□□ -2.2
UTP20YBL004W ATG13Q06628 738 aa1.29□□□□□ -2.2
UTP20YBL004W CIT3P43635 486 aa1.29□□□□□ -2.2
UTP20YBL004W MTR4P47047 1073 aaKnown RBP1.29□□□□□ -2.2
UTP20YBL004W PHM7Q12252 991 aa1.29□□□□□ -2.2
UTP20YBL004W YPR117WQ06116 2489 aa1.29□□□□□ -2.2
UTP20YBL004W ENV11P53246 860 aa1.28□□□□□ -2.2
UTP20YBL004W BUD21Q08492 214 aaPredicted RBP1.28□□□□□ -2.2
UTP20YBL004W STB3Q12427 513 aa1.28□□□□□ -2.2
UTP20YBL004W STE4P18851 423 aa1.28□□□□□ -2.2
UTP20YBL004W BRL1P38770 471 aa1.28□□□□□ -2.2
UTP20YBL004W PSF2P40359 213 aa1.28□□□□□ -2.2
UTP20YBL004W HCM1P25364 564 aa1.28□□□□□ -2.2
UTP20YBL004W PER1P25625 357 aa1.28□□□□□ -2.2
UTP20YBL004W PES4P39684 611 aa1.28□□□□□ -2.2
UTP20YBL004W PIB2P53191 635 aa1.28□□□□□ -2.2
UTP20YBL004W DPL1Q05567 589 aa1.28□□□□□ -2.2
UTP20YBL004W ENT2Q05785 613 aa1.28□□□□□ -2.2
UTP20YBL004W KRS1P15180 591 aaKnown RBP1.28□□□□□ -2.21
UTP20YBL004W TAF5P38129 798 aa1.28□□□□□ -2.21
UTP20YBL004W DMA1P38823 416 aa1.28□□□□□ -2.21
UTP20YBL004W NMD3P38861 518 aaKnown RBP1.28□□□□□ -2.21
UTP20YBL004W MIA40P36046 403 aa1.27□□□□□ -2.21
UTP20YBL004W CSM2P40465 213 aa1.27□□□□□ -2.21
UTP20YBL004W RPO41P13433 1351 aaKnown RBP1.27□□□□□ -2.21
UTP20YBL004W TIF4632P39936 914 aaKnown RBP1.27□□□□□ -2.21
UTP20YBL004W CWH41P53008 833 aa1.27□□□□□ -2.21
UTP20YBL004W BUD2P33314 1104 aa1.27□□□□□ -2.21
UTP20YBL004W ENP1P38333 483 aaKnown RBP1.27□□□□□ -2.21
UTP20YBL004W TLG2Q08144 397 aa1.27□□□□□ -2.21
UTP20YBL004W PRY3P47033 881 aa1.27□□□□□ -2.21
UTP20YBL004W HPC2Q01448 625 aa1.27□□□□□ -2.21
UTP20YBL004W MMR1Q06324 491 aa1.27□□□□□ -2.21
UTP20YBL004W MAM3Q12296 706 aa1.27□□□□□ -2.21
UTP20YBL004W RSM10Q03201 203 aa1.27□□□□□ -2.21
UTP20YBL004W SPE3Q12074 293 aaKnown RBP1.27□□□□□ -2.21
UTP20YBL004W FMO1P38866 432 aa1.26□□□□□ -2.21
UTP20YBL004W YOR097CQ12274 175 aaPredicted RBP1.26□□□□□ -2.21
UTP20YBL004W MRF1P30775 413 aaPredicted RBP1.26□□□□□ -2.21
UTP20YBL004W FET4P40988 552 aa1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 90.6 ms