RNA–Protein interactions for RNA: RDN18-2

RDN18-2, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-2, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-2RDN18-2 DOT5P40553 215 aa12.21□□□□□ -0.46
RDN18-2RDN18-2 FOX2Q02207 900 aaKnown RBP12.21□□□□□ -0.46
RDN18-2RDN18-2 NOT3P06102 836 aaKnown RBP12.2□□□□□ -0.46
RDN18-2RDN18-2 ECM21P38167 1117 aaKnown RBP12.2□□□□□ -0.46
RDN18-2RDN18-2 SSP2Q08646 371 aa12.2□□□□□ -0.46
RDN18-2RDN18-2 UTP10P42945 1769 aaKnown RBP12.19□□□□□ -0.46
RDN18-2RDN18-2 TRL1P09880 827 aaKnown RBP12.19□□□□□ -0.46
RDN18-2RDN18-2 KTR3P38130 404 aaPredicted RBP12.19□□□□□ -0.46
RDN18-2RDN18-2 YFR006WP43590 535 aa12.19□□□□□ -0.46
RDN18-2RDN18-2 FCP1Q03254 732 aa12.19□□□□□ -0.46
RDN18-2RDN18-2 SLA1P32790 1244 aa12.18□□□□□ -0.46
RDN18-2RDN18-2 SLN1P39928 1220 aaPredicted RBP12.18□□□□□ -0.46
RDN18-2RDN18-2 NPA3P47122 385 aa12.18□□□□□ -0.46
RDN18-2RDN18-2 NCB2Q92317 146 aa12.18□□□□□ -0.46
RDN18-2RDN18-2 PDR18P53756 1333 aa12.17□□□□□ -0.46
RDN18-2RDN18-2 TEA1P47988 759 aa12.17□□□□□ -0.46
RDN18-2RDN18-2 MRPS35P53292 345 aa12.17□□□□□ -0.46
RDN18-2RDN18-2 YLR271WQ06152 274 aa12.17□□□□□ -0.46
RDN18-2RDN18-2 YKR075CP36155 307 aa12.16□□□□□ -0.46
RDN18-2RDN18-2 ALO1P54783 526 aaKnown RBP12.16□□□□□ -0.46
RDN18-2RDN18-2 RIM20Q12033 661 aa12.16□□□□□ -0.46
RDN18-2RDN18-2 AAP1P37898 856 aaKnown RBP12.15□□□□□ -0.46
RDN18-2RDN18-2 SSF1P38789 453 aaPredicted RBP12.15□□□□□ -0.46
RDN18-2RDN18-2 YGL242CP53066 181 aa12.15□□□□□ -0.46
RDN18-2RDN18-2 VPS20Q04272 221 aa12.15□□□□□ -0.46
RDN18-2RDN18-2 PKH1Q03407 766 aa12.14□□□□□ -0.47
RDN18-2RDN18-2 PHM7Q12252 991 aa12.14□□□□□ -0.47
RDN18-2RDN18-2 RNR2P09938 399 aaKnown RBP12.13□□□□□ -0.47
RDN18-2RDN18-2 ARL1P38116 183 aaKnown RBP12.13□□□□□ -0.47
RDN18-2RDN18-2 PSH1Q12161 406 aa12.13□□□□□ -0.47
RDN18-2RDN18-2 YGL082WP53155 381 aa12.12□□□□□ -0.47
RDN18-2RDN18-2 PIB2P53191 635 aa12.12□□□□□ -0.47
RDN18-2RDN18-2 GRX1P25373 110 aaKnown RBP12.11□□□□□ -0.47
RDN18-2RDN18-2 KNS1P32350 737 aaPredicted RBP12.11□□□□□ -0.47
RDN18-2RDN18-2 MLC1P53141 149 aa12.11□□□□□ -0.47
RDN18-2RDN18-2 FPR4Q06205 392 aaPredicted RBP12.11□□□□□ -0.47
RDN18-2RDN18-2 BRE1Q07457 700 aaKnown RBP12.11□□□□□ -0.47
RDN18-2RDN18-2 AI2P03876 854 aa12.09□□□□□ -0.47
RDN18-2RDN18-2 YGL081WP53156 320 aa12.09□□□□□ -0.47
RDN18-2RDN18-2 HAP5Q02516 242 aa12.09□□□□□ -0.47
RDN18-2RDN18-2 SSK22P25390 1331 aaPredicted RBP12.09□□□□□ -0.47
RDN18-2RDN18-2 UBP16Q02863 499 aa12.08□□□□□ -0.48
RDN18-2RDN18-2 MTC5Q03897 1148 aa12.08□□□□□ -0.48
RDN18-2RDN18-2 AIM9P40053 627 aaKnown RBP12.07□□□□□ -0.48
RDN18-2RDN18-2 MDG1P53885 366 aa12.07□□□□□ -0.48
RDN18-2RDN18-2 KTR1P27810 393 aaKnown RBP12.07□□□□□ -0.48
RDN18-2RDN18-2 SER1P33330 395 aaKnown RBP12.07□□□□□ -0.48
RDN18-2RDN18-2 BDH2P39713 417 aa12.07□□□□□ -0.48
RDN18-2RDN18-2 HRQ1Q05549 1077 aa12.07□□□□□ -0.48
RDN18-2RDN18-2 GYP5Q12344 894 aa12.07□□□□□ -0.48
RDN18-2RDN18-2 EPS1P40557 701 aa12.05□□□□□ -0.48
RDN18-2RDN18-2 KRI1P42846 591 aaKnown RBP12.05□□□□□ -0.48
RDN18-2RDN18-2 CIR1P42940 261 aa12.04□□□□□ -0.48
RDN18-2RDN18-2 SEC18P18759 758 aaKnown RBP12.04□□□□□ -0.48
RDN18-2RDN18-2 RPN7Q06103 429 aaKnown RBP12.04□□□□□ -0.48
RDN18-2RDN18-2 BIK1P11709 440 aa12.03□□□□□ -0.48
RDN18-2RDN18-2 NYV1Q12255 253 aa12.03□□□□□ -0.48
RDN18-2RDN18-2 HST1P53685 503 aa12.02□□□□□ -0.48
RDN18-2RDN18-2 YNL193WP53870 558 aa12.02□□□□□ -0.48
RDN18-2RDN18-2 RPN11P43588 306 aaKnown RBP12.02□□□□□ -0.49
RDN18-2RDN18-2 LAM6Q08001 693 aa12.02□□□□□ -0.49
RDN18-2RDN18-2 STM1P39015 273 aaKnown RBP12.01□□□□□ -0.49
RDN18-2RDN18-2 GRE2Q12068 342 aaKnown RBP12.01□□□□□ -0.49
RDN18-2RDN18-2 SNU66Q12420 587 aaPredicted RBP12.01□□□□□ -0.49
RDN18-2RDN18-2 SAC3P46674 1301 aa12.01□□□□□ -0.49
RDN18-2RDN18-2 YIL055CP40523 627 aaKnown RBP12□□□□□ -0.49
RDN18-2RDN18-2 CWH41P53008 833 aa12□□□□□ -0.49
RDN18-2RDN18-2 SUP35P05453 685 aaKnown RBP12□□□□□ -0.49
RDN18-2RDN18-2 COG8Q04632 607 aa12□□□□□ -0.49
RDN18-2RDN18-2 TSR3Q12094 313 aaKnown RBP12□□□□□ -0.49
RDN18-2RDN18-2 MSB4Q12317 492 aa12□□□□□ -0.49
RDN18-2RDN18-2 PBY1P38254 753 aa11.99□□□□□ -0.49
RDN18-2RDN18-2 PGA3Q12746 312 aaKnown RBP11.99□□□□□ -0.49
RDN18-2RDN18-2 RVS167P39743 482 aaKnown RBP11.97□□□□□ -0.49
RDN18-2RDN18-2 NPR2P39923 615 aa11.97□□□□□ -0.49
RDN18-2RDN18-2 RPL19AP0CX82 189 aaKnown RBP11.97□□□□□ -0.49
RDN18-2RDN18-2 RPL19BP0CX83 189 aaPredicted RBP11.97□□□□□ -0.49
RDN18-2RDN18-2 CTF18P49956 741 aa11.97□□□□□ -0.49
RDN18-2RDN18-2 KRE33P53914 1056 aaKnown RBP11.97□□□□□ -0.49
RDN18-2RDN18-2 MBR1P23493 339 aa11.96□□□□□ -0.49
RDN18-2RDN18-2 PRP40P33203 583 aaKnown RBP11.96□□□□□ -0.49
RDN18-2RDN18-2 HYR1P40581 163 aaKnown RBP11.96□□□□□ -0.49
RDN18-2RDN18-2 RSC1P53236 928 aa11.96□□□□□ -0.49
RDN18-2RDN18-2 ADR1P07248 1323 aa11.96□□□□□ -0.49
RDN18-2RDN18-2 RPN12P32496 274 aa11.95□□□□□ -0.5
RDN18-2RDN18-2 CIC1P38779 376 aaKnown RBP11.95□□□□□ -0.5
RDN18-2RDN18-2 VID28P40547 921 aa11.95□□□□□ -0.5
RDN18-2RDN18-2 KEX1P09620 729 aa11.95□□□□□ -0.5
RDN18-2RDN18-2 RKM3P38222 552 aa11.95□□□□□ -0.5
RDN18-2RDN18-2 YMR147WP40218 223 aaKnown RBP11.95□□□□□ -0.5
RDN18-2RDN18-2 SPO22P40511 975 aa11.95□□□□□ -0.5
RDN18-2RDN18-2 HAT1Q12341 374 aa11.95□□□□□ -0.5
RDN18-2RDN18-2 ENT3P47160 408 aa11.94□□□□□ -0.5
RDN18-2RDN18-2 APC11Q12157 165 aa11.94□□□□□ -0.5
RDN18-2RDN18-2 LAM4P38800 1345 aa11.94□□□□□ -0.5
RDN18-2RDN18-2 HAL5P38970 855 aaKnown RBP11.93□□□□□ -0.5
RDN18-2RDN18-2 PEX19Q07418 342 aa11.93□□□□□ -0.5
RDN18-2RDN18-2 PRX1P34227 261 aaKnown RBP11.93□□□□□ -0.5
RDN18-2RDN18-2 OSH3P38713 996 aaKnown RBP11.92□□□□□ -0.5
RDN18-2RDN18-2 YJL181WP46987 611 aa11.92□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms