RNA–Protein interactions for RNA: RDN18-1

RDN18-1, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-1, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-1RDN18-1 DOT5P40553 215 aa12.21□□□□□ -0.46
RDN18-1RDN18-1 FOX2Q02207 900 aaKnown RBP12.21□□□□□ -0.46
RDN18-1RDN18-1 NOT3P06102 836 aaKnown RBP12.2□□□□□ -0.46
RDN18-1RDN18-1 ECM21P38167 1117 aaKnown RBP12.2□□□□□ -0.46
RDN18-1RDN18-1 SSP2Q08646 371 aa12.2□□□□□ -0.46
RDN18-1RDN18-1 UTP10P42945 1769 aaKnown RBP12.19□□□□□ -0.46
RDN18-1RDN18-1 TRL1P09880 827 aaKnown RBP12.19□□□□□ -0.46
RDN18-1RDN18-1 KTR3P38130 404 aaPredicted RBP12.19□□□□□ -0.46
RDN18-1RDN18-1 YFR006WP43590 535 aa12.19□□□□□ -0.46
RDN18-1RDN18-1 FCP1Q03254 732 aa12.19□□□□□ -0.46
RDN18-1RDN18-1 SLA1P32790 1244 aa12.18□□□□□ -0.46
RDN18-1RDN18-1 SLN1P39928 1220 aaPredicted RBP12.18□□□□□ -0.46
RDN18-1RDN18-1 NPA3P47122 385 aa12.18□□□□□ -0.46
RDN18-1RDN18-1 NCB2Q92317 146 aa12.18□□□□□ -0.46
RDN18-1RDN18-1 PDR18P53756 1333 aa12.17□□□□□ -0.46
RDN18-1RDN18-1 TEA1P47988 759 aa12.17□□□□□ -0.46
RDN18-1RDN18-1 MRPS35P53292 345 aa12.17□□□□□ -0.46
RDN18-1RDN18-1 YLR271WQ06152 274 aa12.17□□□□□ -0.46
RDN18-1RDN18-1 YKR075CP36155 307 aa12.16□□□□□ -0.46
RDN18-1RDN18-1 ALO1P54783 526 aaKnown RBP12.16□□□□□ -0.46
RDN18-1RDN18-1 RIM20Q12033 661 aa12.16□□□□□ -0.46
RDN18-1RDN18-1 AAP1P37898 856 aaKnown RBP12.15□□□□□ -0.46
RDN18-1RDN18-1 SSF1P38789 453 aaPredicted RBP12.15□□□□□ -0.46
RDN18-1RDN18-1 YGL242CP53066 181 aa12.15□□□□□ -0.46
RDN18-1RDN18-1 VPS20Q04272 221 aa12.15□□□□□ -0.46
RDN18-1RDN18-1 PKH1Q03407 766 aa12.14□□□□□ -0.47
RDN18-1RDN18-1 PHM7Q12252 991 aa12.14□□□□□ -0.47
RDN18-1RDN18-1 RNR2P09938 399 aaKnown RBP12.13□□□□□ -0.47
RDN18-1RDN18-1 ARL1P38116 183 aaKnown RBP12.13□□□□□ -0.47
RDN18-1RDN18-1 PSH1Q12161 406 aa12.13□□□□□ -0.47
RDN18-1RDN18-1 YGL082WP53155 381 aa12.12□□□□□ -0.47
RDN18-1RDN18-1 PIB2P53191 635 aa12.12□□□□□ -0.47
RDN18-1RDN18-1 GRX1P25373 110 aaKnown RBP12.11□□□□□ -0.47
RDN18-1RDN18-1 KNS1P32350 737 aaPredicted RBP12.11□□□□□ -0.47
RDN18-1RDN18-1 MLC1P53141 149 aa12.11□□□□□ -0.47
RDN18-1RDN18-1 FPR4Q06205 392 aaPredicted RBP12.11□□□□□ -0.47
RDN18-1RDN18-1 BRE1Q07457 700 aaKnown RBP12.11□□□□□ -0.47
RDN18-1RDN18-1 AI2P03876 854 aa12.09□□□□□ -0.47
RDN18-1RDN18-1 YGL081WP53156 320 aa12.09□□□□□ -0.47
RDN18-1RDN18-1 HAP5Q02516 242 aa12.09□□□□□ -0.47
RDN18-1RDN18-1 SSK22P25390 1331 aaPredicted RBP12.09□□□□□ -0.47
RDN18-1RDN18-1 UBP16Q02863 499 aa12.08□□□□□ -0.48
RDN18-1RDN18-1 MTC5Q03897 1148 aa12.08□□□□□ -0.48
RDN18-1RDN18-1 AIM9P40053 627 aaKnown RBP12.07□□□□□ -0.48
RDN18-1RDN18-1 MDG1P53885 366 aa12.07□□□□□ -0.48
RDN18-1RDN18-1 KTR1P27810 393 aaKnown RBP12.07□□□□□ -0.48
RDN18-1RDN18-1 SER1P33330 395 aaKnown RBP12.07□□□□□ -0.48
RDN18-1RDN18-1 BDH2P39713 417 aa12.07□□□□□ -0.48
RDN18-1RDN18-1 HRQ1Q05549 1077 aa12.07□□□□□ -0.48
RDN18-1RDN18-1 GYP5Q12344 894 aa12.07□□□□□ -0.48
RDN18-1RDN18-1 EPS1P40557 701 aa12.05□□□□□ -0.48
RDN18-1RDN18-1 KRI1P42846 591 aaKnown RBP12.05□□□□□ -0.48
RDN18-1RDN18-1 CIR1P42940 261 aa12.04□□□□□ -0.48
RDN18-1RDN18-1 SEC18P18759 758 aaKnown RBP12.04□□□□□ -0.48
RDN18-1RDN18-1 RPN7Q06103 429 aaKnown RBP12.04□□□□□ -0.48
RDN18-1RDN18-1 BIK1P11709 440 aa12.03□□□□□ -0.48
RDN18-1RDN18-1 NYV1Q12255 253 aa12.03□□□□□ -0.48
RDN18-1RDN18-1 HST1P53685 503 aa12.02□□□□□ -0.48
RDN18-1RDN18-1 YNL193WP53870 558 aa12.02□□□□□ -0.48
RDN18-1RDN18-1 RPN11P43588 306 aaKnown RBP12.02□□□□□ -0.49
RDN18-1RDN18-1 LAM6Q08001 693 aa12.02□□□□□ -0.49
RDN18-1RDN18-1 STM1P39015 273 aaKnown RBP12.01□□□□□ -0.49
RDN18-1RDN18-1 GRE2Q12068 342 aaKnown RBP12.01□□□□□ -0.49
RDN18-1RDN18-1 SNU66Q12420 587 aaPredicted RBP12.01□□□□□ -0.49
RDN18-1RDN18-1 SAC3P46674 1301 aa12.01□□□□□ -0.49
RDN18-1RDN18-1 YIL055CP40523 627 aaKnown RBP12□□□□□ -0.49
RDN18-1RDN18-1 CWH41P53008 833 aa12□□□□□ -0.49
RDN18-1RDN18-1 SUP35P05453 685 aaKnown RBP12□□□□□ -0.49
RDN18-1RDN18-1 COG8Q04632 607 aa12□□□□□ -0.49
RDN18-1RDN18-1 TSR3Q12094 313 aaKnown RBP12□□□□□ -0.49
RDN18-1RDN18-1 MSB4Q12317 492 aa12□□□□□ -0.49
RDN18-1RDN18-1 PBY1P38254 753 aa11.99□□□□□ -0.49
RDN18-1RDN18-1 PGA3Q12746 312 aaKnown RBP11.99□□□□□ -0.49
RDN18-1RDN18-1 RVS167P39743 482 aaKnown RBP11.97□□□□□ -0.49
RDN18-1RDN18-1 NPR2P39923 615 aa11.97□□□□□ -0.49
RDN18-1RDN18-1 RPL19AP0CX82 189 aaKnown RBP11.97□□□□□ -0.49
RDN18-1RDN18-1 RPL19BP0CX83 189 aaPredicted RBP11.97□□□□□ -0.49
RDN18-1RDN18-1 CTF18P49956 741 aa11.97□□□□□ -0.49
RDN18-1RDN18-1 KRE33P53914 1056 aaKnown RBP11.97□□□□□ -0.49
RDN18-1RDN18-1 MBR1P23493 339 aa11.96□□□□□ -0.49
RDN18-1RDN18-1 PRP40P33203 583 aaKnown RBP11.96□□□□□ -0.49
RDN18-1RDN18-1 HYR1P40581 163 aaKnown RBP11.96□□□□□ -0.49
RDN18-1RDN18-1 RSC1P53236 928 aa11.96□□□□□ -0.49
RDN18-1RDN18-1 ADR1P07248 1323 aa11.96□□□□□ -0.49
RDN18-1RDN18-1 RPN12P32496 274 aa11.95□□□□□ -0.5
RDN18-1RDN18-1 CIC1P38779 376 aaKnown RBP11.95□□□□□ -0.5
RDN18-1RDN18-1 VID28P40547 921 aa11.95□□□□□ -0.5
RDN18-1RDN18-1 KEX1P09620 729 aa11.95□□□□□ -0.5
RDN18-1RDN18-1 RKM3P38222 552 aa11.95□□□□□ -0.5
RDN18-1RDN18-1 YMR147WP40218 223 aaKnown RBP11.95□□□□□ -0.5
RDN18-1RDN18-1 SPO22P40511 975 aa11.95□□□□□ -0.5
RDN18-1RDN18-1 HAT1Q12341 374 aa11.95□□□□□ -0.5
RDN18-1RDN18-1 ENT3P47160 408 aa11.94□□□□□ -0.5
RDN18-1RDN18-1 APC11Q12157 165 aa11.94□□□□□ -0.5
RDN18-1RDN18-1 LAM4P38800 1345 aa11.94□□□□□ -0.5
RDN18-1RDN18-1 HAL5P38970 855 aaKnown RBP11.93□□□□□ -0.5
RDN18-1RDN18-1 PEX19Q07418 342 aa11.93□□□□□ -0.5
RDN18-1RDN18-1 PRX1P34227 261 aaKnown RBP11.93□□□□□ -0.5
RDN18-1RDN18-1 OSH3P38713 996 aaKnown RBP11.92□□□□□ -0.5
RDN18-1RDN18-1 YJL181WP46987 611 aa11.92□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms