RNA–Protein interactions for RNA: ENST00000641588.1

CASC19-243, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-243ENST00000641588 MAP3K1Q13233 1512 aa9.06□□□□□ -0.96
CASC19-243ENST00000641588 RRAGDQ9NQL2 400 aaPredicted RBP9.05□□□□□ -0.96
CASC19-243ENST00000641588 TOP2AP11388 1531 aaKnown RBP9.05□□□□□ -0.96
CASC19-243ENST00000641588 PRIM1P49642 420 aaKnown RBP9.05□□□□□ -0.96
CASC19-243ENST00000641588 TERF1P54274 439 aa9.05□□□□□ -0.96
CASC19-243ENST00000641588 ISY1Q9ULR0 285 aaKnown RBP9.05□□□□□ -0.96
CASC19-243ENST00000641588 RUSC2Q8N2Y8 1516 aa9.04□□□□□ -0.96
CASC19-243ENST00000641588 DCAF11Q8TEB1 546 aa9.04□□□□□ -0.96
CASC19-243ENST00000641588 PRDM4Q9UKN5 801 aa9.04□□□□□ -0.96
CASC19-243ENST00000641588 CNTLNQ9NXG0 1405 aa9.04□□□□□ -0.96
CASC19-243ENST00000641588 WIZO95785 1651 aa9.03□□□□□ -0.96
CASC19-243ENST00000641588 SLC34A2O95436 690 aa9.03□□□□□ -0.96
CASC19-243ENST00000641588 PDE4DQ08499 809 aa9.03□□□□□ -0.96
CASC19-243ENST00000641588 TAF7LQ5H9L4 462 aa9.03□□□□□ -0.96
CASC19-243ENST00000641588 MTERF4Q7Z6M4 381 aaKnown RBP9.03□□□□□ -0.96
CASC19-243ENST00000641588 NPM2Q86SE8 214 aaKnown RBP9.03□□□□□ -0.96
CASC19-243ENST00000641588 SCRIBQ14160 1630 aa9.03□□□□□ -0.96
CASC19-243ENST00000641588 MINK1Q8N4C8 1332 aaPredicted RBP9.02□□□□□ -0.97
CASC19-243ENST00000641588 TONSLQ96HA7 1378 aa9.02□□□□□ -0.97
CASC19-243ENST00000641588 SYNJ1O43426 1573 aa9.02□□□□□ -0.97
CASC19-243ENST00000641588 RANGAP1P46060 587 aaPredicted RBP9.01□□□□□ -0.97
CASC19-243ENST00000641588 SMAP1Q8IYB5 467 aaPredicted RBP9.01□□□□□ -0.97
CASC19-243ENST00000641588 KDM4CQ9H3R0 1056 aa9.01□□□□□ -0.97
CASC19-243ENST00000641588 CECR2Q9BXF3 1484 aa9.01□□□□□ -0.97
CASC19-243ENST00000641588 ERICH3Q5RHP9 1530 aa9.01□□□□□ -0.97
CASC19-243ENST00000641588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.01□□□□□ -0.97
CASC19-243ENST00000641588 GNPATO15228 680 aa9□□□□□ -0.97
CASC19-243ENST00000641588 FCHSD2O94868 740 aa9□□□□□ -0.97
CASC19-243ENST00000641588 MAP2K5Q13163 448 aa9□□□□□ -0.97
CASC19-243ENST00000641588 PRKRIP1Q9H875 184 aaPredicted RBP9□□□□□ -0.97
CASC19-243ENST00000641588 EIF2AK3Q9NZJ5 1116 aaKnown RBP9□□□□□ -0.97
CASC19-243ENST00000641588 IRF6O14896 467 aa9□□□□□ -0.97
CASC19-243ENST00000641588 FECHP22830 423 aa9□□□□□ -0.97
CASC19-243ENST00000641588 HIC1Q14526 733 aa9□□□□□ -0.97
CASC19-243ENST00000641588 CCDC102AQ96A19 550 aa9□□□□□ -0.97
CASC19-243ENST00000641588 A0A0U1RQG5 324 aaPredicted RBP8.99□□□□□ -0.97
CASC19-243ENST00000641588 MRS2Q9HD23 443 aa8.99□□□□□ -0.97
CASC19-243ENST00000641588 UTP14CQ5TAP6 766 aaKnown RBP8.98□□□□□ -0.97
CASC19-243ENST00000641588 ARAP1Q96P48 1450 aa8.98□□□□□ -0.97
CASC19-243ENST00000641588 PTGDRQ13258 359 aa8.97□□□□□ -0.97
CASC19-243ENST00000641588 SIN3AQ96ST3 1273 aa8.97□□□□□ -0.97
CASC19-243ENST00000641588 FSD2A1L4K1 749 aa8.96□□□□□ -0.97
CASC19-243ENST00000641588 PCDHGA4Q9Y5G9 962 aa8.96□□□□□ -0.97
CASC19-243ENST00000641588 FRAT2O75474 233 aaPredicted RBP8.95□□□□□ -0.98
CASC19-243ENST00000641588 KANK4Q5T7N3 995 aaPredicted RBP8.95□□□□□ -0.98
CASC19-243ENST00000641588 AKNAQ7Z591 1439 aa8.95□□□□□ -0.98
CASC19-243ENST00000641588 RAPGEF2Q9Y4G8 1499 aa8.95□□□□□ -0.98
CASC19-243ENST00000641588 GOLGA6L3A6NEY3 463 aa8.95□□□□□ -0.98
CASC19-243ENST00000641588 PHF14O94880 888 aa8.95□□□□□ -0.98
CASC19-243ENST00000641588 MRE11P49959 708 aa8.95□□□□□ -0.98
CASC19-243ENST00000641588 PDE3BQ13370 1112 aa8.95□□□□□ -0.98
CASC19-243ENST00000641588 C14orf37Q86TY3 774 aa8.95□□□□□ -0.98
CASC19-243ENST00000641588 EPAS1Q99814 870 aa8.95□□□□□ -0.98
CASC19-243ENST00000641588 ARID4BQ4LE39 1312 aaPredicted RBP8.94□□□□□ -0.98
CASC19-243ENST00000641588 RRP1P56182 461 aaKnown RBP8.94□□□□□ -0.98
CASC19-243ENST00000641588 EN1Q05925 392 aaPredicted RBP8.94□□□□□ -0.98
CASC19-243ENST00000641588 AMHR2Q16671 573 aa8.94□□□□□ -0.98
CASC19-243ENST00000641588 FAM9BQ8IZU0 186 aa8.94□□□□□ -0.98
CASC19-243ENST00000641588 CDHR5Q9HBB8 845 aa8.94□□□□□ -0.98
CASC19-243ENST00000641588 PCDHGA10Q9Y5H3 936 aa8.94□□□□□ -0.98
CASC19-243ENST00000641588 ESPNB1AK53 854 aa8.93□□□□□ -0.98
CASC19-243ENST00000641588 EIF4G2P78344 907 aaKnown RBP eCLIP8.93□□□□□ -0.98
CASC19-243ENST00000641588 BECN1Q14457 450 aa8.93□□□□□ -0.98
CASC19-243ENST00000641588 NCOA1Q15788 1441 aa8.92□□□□□ -0.98
CASC19-243ENST00000641588 ABCA5Q8WWZ7 1642 aa8.92□□□□□ -0.98
CASC19-243ENST00000641588 MAP3K7O43318 606 aa8.92□□□□□ -0.98
CASC19-243ENST00000641588 TNNT2P45379 298 aaPredicted RBP8.92□□□□□ -0.98
CASC19-243ENST00000641588 FAM161AQ3B820 660 aa8.92□□□□□ -0.98
CASC19-243ENST00000641588 RBM33Q96EV2 1170 aaKnown RBP8.92□□□□□ -0.98
CASC19-243ENST00000641588 NPDC1Q9NQX5 325 aaPredicted RBP8.92□□□□□ -0.98
CASC19-243ENST00000641588 KDM4FA0A1W2PPD8 638 aa8.91□□□□□ -0.98
CASC19-243ENST00000641588 CNGB1Q14028 1251 aaPredicted RBP8.91□□□□□ -0.98
CASC19-243ENST00000641588 TAF3Q5VWG9 929 aa8.91□□□□□ -0.98
CASC19-243ENST00000641588 PARP9Q8IXQ6 854 aa8.91□□□□□ -0.98
CASC19-243ENST00000641588 IPO4Q8TEX9 1081 aaKnown RBP8.91□□□□□ -0.98
CASC19-243ENST00000641588 FAM117AQ9C073 453 aa8.91□□□□□ -0.98
CASC19-243ENST00000641588 CCDC7Q96M83 1385 aa8.91□□□□□ -0.98
CASC19-243ENST00000641588 XRCC6P12956 609 aaKnown RBP eCLIP8.9□□□□□ -0.982e-6■■■□□ 17
CASC19-243ENST00000641588 CANXP27824 592 aaKnown RBP8.9□□□□□ -0.98
CASC19-243ENST00000641588 TYW1BQ6NUM6 668 aa8.9□□□□□ -0.98
CASC19-243ENST00000641588 SLAIN1Q8ND83 568 aa8.9□□□□□ -0.98
CASC19-243ENST00000641588 PRXQ9BXM0 1461 aa8.9□□□□□ -0.99
CASC19-243ENST00000641588 POTEJP0CG39 1038 aa8.9□□□□□ -0.99
CASC19-243ENST00000641588 RSPH4AQ5TD94 716 aa8.9□□□□□ -0.99
CASC19-243ENST00000641588 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.9□□□□□ -0.99
CASC19-243ENST00000641588 UACAQ9BZF9 1416 aa8.89□□□□□ -0.99
CASC19-243ENST00000641588 KIF20AO95235 890 aa8.89□□□□□ -0.99
CASC19-243ENST00000641588 HSPA5P11021 654 aaKnown RBP8.89□□□□□ -0.99
CASC19-243ENST00000641588 TSR1Q2NL82 804 aaKnown RBP8.89□□□□□ -0.99
CASC19-243ENST00000641588 JPH4Q96JJ6 628 aa8.89□□□□□ -0.99
CASC19-243ENST00000641588 HIRIP3Q9BW71 556 aaPredicted RBP8.89□□□□□ -0.99
CASC19-243ENST00000641588 MYH16Q9H6N6 1097 aa8.89□□□□□ -0.99
CASC19-243ENST00000641588 CCDC144AA2RUR9 1427 aa8.89□□□□□ -0.99
CASC19-243ENST00000641588 INSRP06213 1382 aa8.88□□□□□ -0.99
CASC19-243ENST00000641588 KTN1Q86UP2 1357 aaKnown RBP8.88□□□□□ -0.99
CASC19-243ENST00000641588 RGS3P49796 1198 aa8.88□□□□□ -0.99
CASC19-243ENST00000641588 CCDC184Q52MB2 194 aa8.88□□□□□ -0.99
CASC19-243ENST00000641588 PHLDB1Q86UU1 1377 aa8.88□□□□□ -0.99
CASC19-243ENST00000641588 OFD1O75665 1012 aa8.87□□□□□ -0.99
CASC19-243ENST00000641588 CENPQQ7L2Z9 268 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms