RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 PDLIM2Q96JY6 352 aa7.19□□□□□ -1.26
POLR2B-213ENST00000639658 CIZ1Q9ULV3 898 aaPredicted RBP7.19□□□□□ -1.26
POLR2B-213ENST00000639658 FAM193AP78312 1265 aa7.18□□□□□ -1.26
POLR2B-213ENST00000639658 CSPP1Q1MSJ5 1256 aa7.18□□□□□ -1.26
POLR2B-213ENST00000639658 ZFP91Q96JP5 570 aaPredicted RBP7.18□□□□□ -1.26
POLR2B-213ENST00000639658 RBM25P49756 843 aaKnown RBP7.18□□□□□ -1.26
POLR2B-213ENST00000639658 TBC1D32Q96NH3 1257 aa7.18□□□□□ -1.26
POLR2B-213ENST00000639658 PPP4R3BQ5MIZ7 849 aa7.17□□□□□ -1.26
POLR2B-213ENST00000639658 TRMT2AQ8IZ69 625 aaKnown RBP7.17□□□□□ -1.26
POLR2B-213ENST00000639658 NOL7Q9UMY1 257 aaKnown RBP7.17□□□□□ -1.26
POLR2B-213ENST00000639658 TRPM1Q7Z4N2 1603 aa7.17□□□□□ -1.26
POLR2B-213ENST00000639658 ABCC10Q5T3U5 1492 aa7.17□□□□□ -1.26
POLR2B-213ENST00000639658 RGS22Q8NE09 1264 aa7.17□□□□□ -1.26
POLR2B-213ENST00000639658 PANK2Q9BZ23 570 aa7.17□□□□□ -1.26
POLR2B-213ENST00000639658 CHMP5Q9NZZ3 219 aa7.17□□□□□ -1.26
POLR2B-213ENST00000639658 ADGRL2O95490 1459 aa7.17□□□□□ -1.26
POLR2B-213ENST00000639658 YY1AP1Q9H869 796 aa7.16□□□□□ -1.26
POLR2B-213ENST00000639658 SYNMO15061 1565 aa7.16□□□□□ -1.26
POLR2B-213ENST00000639658 TRAK2O60296 914 aa7.16□□□□□ -1.26
POLR2B-213ENST00000639658 CRBNQ96SW2 442 aa7.16□□□□□ -1.26
POLR2B-213ENST00000639658 PZPP20742 1482 aa7.16□□□□□ -1.26
POLR2B-213ENST00000639658 L3MBTL2Q969R5 705 aa7.16□□□□□ -1.26
POLR2B-213ENST00000639658 CGNL1Q0VF96 1302 aa7.15□□□□□ -1.26
POLR2B-213ENST00000639658 TNNT2P45379 298 aaPredicted RBP7.15□□□□□ -1.26
POLR2B-213ENST00000639658 NBPF8Q3BBV2 869 aa7.15□□□□□ -1.26
POLR2B-213ENST00000639658 AXDND1Q5T1B0 1012 aaPredicted RBP7.15□□□□□ -1.26
POLR2B-213ENST00000639658 NLRP13Q86W25 1043 aa7.15□□□□□ -1.26
POLR2B-213ENST00000639658 USP47Q96K76 1375 aa7.15□□□□□ -1.26
POLR2B-213ENST00000639658 EIF4G3O43432 1585 aaKnown RBP7.15□□□□□ -1.27
POLR2B-213ENST00000639658 CLGNO14967 610 aa7.14□□□□□ -1.27
POLR2B-213ENST00000639658 ZNF830Q96NB3 372 aaPredicted RBP7.14□□□□□ -1.27
POLR2B-213ENST00000639658 SLC4A3P48751 1232 aa7.14□□□□□ -1.27
POLR2B-213ENST00000639658 SASS6Q6UVJ0 657 aa7.14□□□□□ -1.27
POLR2B-213ENST00000639658 NGEFQ8N5V2 710 aa7.14□□□□□ -1.27
POLR2B-213ENST00000639658 SECISBP2LQ93073 1101 aaKnown RBP7.14□□□□□ -1.27
POLR2B-213ENST00000639658 SNX21Q969T3 373 aa7.14□□□□□ -1.27
POLR2B-213ENST00000639658 RNF17Q9BXT8 1623 aaKnown RBP7.14□□□□□ -1.27
POLR2B-213ENST00000639658 PRDM15P57071 1507 aaPredicted RBP7.14□□□□□ -1.27
POLR2B-213ENST00000639658 GRIN2AQ12879 1464 aa7.14□□□□□ -1.27
POLR2B-213ENST00000639658 SCAF11Q99590 1463 aaKnown RBP7.14□□□□□ -1.27
POLR2B-213ENST00000639658 CARMIL1Q5VZK9 1371 aa7.14□□□□□ -1.27
POLR2B-213ENST00000639658 ZNF445P59923 1031 aa7.14□□□□□ -1.27
POLR2B-213ENST00000639658 MAGI3Q5TCQ9 1506 aa7.13□□□□□ -1.27
POLR2B-213ENST00000639658 COL17A1Q9UMD9 1497 aaPredicted RBP7.13□□□□□ -1.27
POLR2B-213ENST00000639658 PTPRGP23470 1445 aa7.13□□□□□ -1.27
POLR2B-213ENST00000639658 GPRASP1Q5JY77 1395 aa7.13□□□□□ -1.27
POLR2B-213ENST00000639658 NPC1L1Q9UHC9 1359 aa7.13□□□□□ -1.27
POLR2B-213ENST00000639658 TRIM44Q96DX7 344 aaPredicted RBP7.13□□□□□ -1.27
POLR2B-213ENST00000639658 TBC1D2Q9BYX2 928 aa7.13□□□□□ -1.27
POLR2B-213ENST00000639658 FAM50AQ14320 339 aaKnown RBP7.12□□□□□ -1.27
POLR2B-213ENST00000639658 CREBRFQ8IUR6 639 aa7.12□□□□□ -1.27
POLR2B-213ENST00000639658 CFAP65Q6ZU64 1925 aaKnown RBP7.12□□□□□ -1.27
POLR2B-213ENST00000639658 SMC5Q8IY18 1101 aa7.12□□□□□ -1.27
POLR2B-213ENST00000639658 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.12□□□□□ -1.27
POLR2B-213ENST00000639658 PRIMPOLQ96LW4 560 aa7.12□□□□□ -1.27
POLR2B-213ENST00000639658 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.12□□□□□ -1.27
POLR2B-213ENST00000639658 MPHOSPH9Q99550 1183 aa7.12□□□□□ -1.27
POLR2B-213ENST00000639658 CLTCL1P53675 1640 aa7.12□□□□□ -1.27
POLR2B-213ENST00000639658 TMC1Q8TDI8 760 aa7.11□□□□□ -1.27
POLR2B-213ENST00000639658 EIF2AK4Q9P2K8 1649 aaKnown RBP7.11□□□□□ -1.27
POLR2B-213ENST00000639658 ABCA10Q8WWZ4 1543 aa7.11□□□□□ -1.27
POLR2B-213ENST00000639658 HMGN5P82970 282 aaKnown RBP7.11□□□□□ -1.27
POLR2B-213ENST00000639658 GRIPAP1Q4V328 841 aa7.11□□□□□ -1.27
POLR2B-213ENST00000639658 MYRIPQ8NFW9 859 aa7.11□□□□□ -1.27
POLR2B-213ENST00000639658 ZNF622Q969S3 477 aaKnown RBP eCLIP7.11□□□□□ -1.271e-6■□□□□ 11.1
POLR2B-213ENST00000639658 NKTRP30414 1462 aaKnown RBP7.11□□□□□ -1.27
POLR2B-213ENST00000639658 SYCP1Q15431 976 aa7.11□□□□□ -1.27
POLR2B-213ENST00000639658 AEBP2Q6ZN18 517 aaPredicted RBP7.11□□□□□ -1.27
POLR2B-213ENST00000639658 NESP48681 1621 aa7.1□□□□□ -1.27
POLR2B-213ENST00000639658 ADCY10Q96PN6 1610 aa7.1□□□□□ -1.27
POLR2B-213ENST00000639658 RAD50Q92878 1312 aa7.1□□□□□ -1.27
POLR2B-213ENST00000639658 PDE3AQ14432 1141 aa7.1□□□□□ -1.27
POLR2B-213ENST00000639658 PBRM1Q86U86 1689 aa7.1□□□□□ -1.27
POLR2B-213ENST00000639658 FAM135AQ9P2D6 1515 aa7.1□□□□□ -1.27
POLR2B-213ENST00000639658 PIK3C2GO75747 1445 aa7.1□□□□□ -1.27
POLR2B-213ENST00000639658 IRX3P78415 501 aaPredicted RBP7.1□□□□□ -1.27
POLR2B-213ENST00000639658 RAB3GAP1Q15042 981 aa7.1□□□□□ -1.27
POLR2B-213ENST00000639658 DUSP27Q5VZP5 1158 aa7.1□□□□□ -1.27
POLR2B-213ENST00000639658 CEP120Q8N960 986 aa7.09□□□□□ -1.27
POLR2B-213ENST00000639658 DNAJC2Q99543 621 aaKnown RBP7.09□□□□□ -1.27
POLR2B-213ENST00000639658 GEMIN8Q9NWZ8 242 aaKnown RBP7.09□□□□□ -1.27
POLR2B-213ENST00000639658 ZKSCAN5Q9Y2L8 839 aa7.09□□□□□ -1.27
POLR2B-213ENST00000639658 PSEN1P49768 467 aa7.09□□□□□ -1.27
POLR2B-213ENST00000639658 GABPB1Q06547 395 aaPredicted RBP7.09□□□□□ -1.27
POLR2B-213ENST00000639658 DAPK1P53355 1430 aa7.09□□□□□ -1.27
POLR2B-213ENST00000639658 UQCRHLA0A096LP55 91 aa7.09□□□□□ -1.28
POLR2B-213ENST00000639658 TULP2O00295 520 aa7.09□□□□□ -1.28
POLR2B-213ENST00000639658 PER1O15534 1290 aaPredicted RBP7.09□□□□□ -1.28
POLR2B-213ENST00000639658 UQCRHP07919 91 aa7.09□□□□□ -1.28
POLR2B-213ENST00000639658 DHX37Q8IY37 1157 aaKnown RBP7.09□□□□□ -1.28
POLR2B-213ENST00000639658 KLHL40Q2TBA0 621 aa7.08□□□□□ -1.28
POLR2B-213ENST00000639658 GAS2L3Q86XJ1 694 aa7.08□□□□□ -1.28
POLR2B-213ENST00000639658 FEZ1Q99689 392 aa7.08□□□□□ -1.28
POLR2B-213ENST00000639658 TSPYL1Q9H0U9 437 aa7.08□□□□□ -1.28
POLR2B-213ENST00000639658 KANK1Q14678 1352 aa7.08□□□□□ -1.28
POLR2B-213ENST00000639658 MSNP26038 577 aaKnown RBP7.08□□□□□ -1.28
POLR2B-213ENST00000639658 NUP160Q12769 1436 aa7.07□□□□□ -1.28
POLR2B-213ENST00000639658 SHANK2Q9UPX8 1470 aa7.07□□□□□ -1.28
POLR2B-213ENST00000639658 TULP1O00294 542 aaPredicted RBP7.06□□□□□ -1.28
POLR2B-213ENST00000639658 ANKRD7Q92527 254 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms