RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 C8orf37Q96NL8 207 aa17.67■□□□□ 0.42
PTP4A1-207ENST00000639568 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.67■□□□□ 0.422e-8■■■□□ 15.1
PTP4A1-207ENST00000639568 ATAD2Q6PL18 1390 aa17.66■□□□□ 0.42
PTP4A1-207ENST00000639568 ARHGEF5Q12774 1597 aa17.66■□□□□ 0.42
PTP4A1-207ENST00000639568 C19orf44Q9H6X5 657 aa17.65■□□□□ 0.42
PTP4A1-207ENST00000639568 NWD1Q149M9 1564 aa17.65■□□□□ 0.42
PTP4A1-207ENST00000639568 PIK3C2BO00750 1634 aa17.65■□□□□ 0.42
PTP4A1-207ENST00000639568 EIF2AK4Q9P2K8 1649 aaKnown RBP17.65■□□□□ 0.42
PTP4A1-207ENST00000639568 PPP1R15AO75807 674 aaPredicted RBP17.64■□□□□ 0.41
PTP4A1-207ENST00000639568 NCOA3Q9Y6Q9 1424 aa17.64■□□□□ 0.41
PTP4A1-207ENST00000639568 CFAP65Q6ZU64 1925 aaKnown RBP17.63■□□□□ 0.41
PTP4A1-207ENST00000639568 MROH1Q8NDA8 1641 aa17.63■□□□□ 0.41
PTP4A1-207ENST00000639568 SHPRHQ149N8 1683 aa17.62■□□□□ 0.41
PTP4A1-207ENST00000639568 CEP152O94986 1710 aa17.62■□□□□ 0.41
PTP4A1-207ENST00000639568 HDGFP51858 240 aaKnown RBP17.62■□□□□ 0.41
PTP4A1-207ENST00000639568 KANK1Q14678 1352 aa17.62■□□□□ 0.41
PTP4A1-207ENST00000639568 AHDC1Q5TGY3 1603 aaPredicted RBP17.61■□□□□ 0.41
PTP4A1-207ENST00000639568 BRINP3Q76B58 766 aa17.61■□□□□ 0.41
PTP4A1-207ENST00000639568 LRRC59Q96AG4 307 aaKnown RBP17.6■□□□□ 0.41
PTP4A1-207ENST00000639568 KDM5AP29375 1690 aaKnown RBP17.59■□□□□ 0.41
PTP4A1-207ENST00000639568 DUOX2Q9NRD8 1548 aa17.58■□□□□ 0.41
PTP4A1-207ENST00000639568 SLC52A1Q9NWF4 448 aa17.58■□□□□ 0.4
PTP4A1-207ENST00000639568 MAST1Q9Y2H9 1570 aa17.57■□□□□ 0.4
PTP4A1-207ENST00000639568 CCDC125Q86Z20 511 aa17.57■□□□□ 0.4
PTP4A1-207ENST00000639568 TBX22Q9Y458 520 aa17.57■□□□□ 0.4
PTP4A1-207ENST00000639568 SETBP1Q9Y6X0 1596 aa17.57■□□□□ 0.4
PTP4A1-207ENST00000639568 PLEKHG1Q9ULL1 1385 aa17.56■□□□□ 0.4
PTP4A1-207ENST00000639568 RRP7BPQ9NSQ0 103 aa17.56■□□□□ 0.4
PTP4A1-207ENST00000639568 KIF15Q9NS87 1388 aa17.54■□□□□ 0.4
PTP4A1-207ENST00000639568 ADAMTS2O95450 1211 aa17.54■□□□□ 0.4
PTP4A1-207ENST00000639568 SETD5Q9C0A6 1442 aa17.54■□□□□ 0.4
PTP4A1-207ENST00000639568 ERBINQ96RT1 1412 aa17.53■□□□□ 0.4
PTP4A1-207ENST00000639568 DIP2AQ14689 1571 aa17.52■□□□□ 0.39
PTP4A1-207ENST00000639568 ADGRB3O60242 1522 aa17.52■□□□□ 0.39
PTP4A1-207ENST00000639568 USP21Q9UK80 565 aa17.51■□□□□ 0.39
PTP4A1-207ENST00000639568 TRPC5Q9UL62 973 aaPredicted RBP17.51■□□□□ 0.39
PTP4A1-207ENST00000639568 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.5■□□□□ 0.39
PTP4A1-207ENST00000639568 RIMS2Q9UQ26 1411 aa17.49■□□□□ 0.39
PTP4A1-207ENST00000639568 MYOM3Q5VTT5 1437 aa17.48■□□□□ 0.39
PTP4A1-207ENST00000639568 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.48■□□□□ 0.39
PTP4A1-207ENST00000639568 NOS1P29475 1434 aa17.47■□□□□ 0.39
PTP4A1-207ENST00000639568 CHD2O14647 1828 aaKnown RBP17.47■□□□□ 0.39
PTP4A1-207ENST00000639568 AMOTL2Q9Y2J4 779 aa17.47■□□□□ 0.39
PTP4A1-207ENST00000639568 PNPLA6Q8IY17 1366 aa17.47■□□□□ 0.39
PTP4A1-207ENST00000639568 ASXL1Q8IXJ9 1541 aa17.47■□□□□ 0.39
PTP4A1-207ENST00000639568 ZFYVE9O95405 1425 aa17.47■□□□□ 0.39
PTP4A1-207ENST00000639568 PIK3R4Q99570 1358 aa17.46■□□□□ 0.39
PTP4A1-207ENST00000639568 EP400Q96L91 3159 aa17.46■□□□□ 0.39
PTP4A1-207ENST00000639568 CHGAP10645 457 aaKnown RBP17.45■□□□□ 0.38
PTP4A1-207ENST00000639568 DDX17Q92841 729 aaKnown RBP17.45■□□□□ 0.38
PTP4A1-207ENST00000639568 DCCP43146 1447 aa17.45■□□□□ 0.38
PTP4A1-207ENST00000639568 LMTK2Q8IWU2 1503 aa17.43■□□□□ 0.38
PTP4A1-207ENST00000639568 FNBP4Q8N3X1 1017 aaPredicted RBP17.41■□□□□ 0.38
PTP4A1-207ENST00000639568 ADAMTS13Q76LX8 1427 aa17.4■□□□□ 0.38
PTP4A1-207ENST00000639568 SF3B2Q13435 895 aaKnown RBP17.4■□□□□ 0.38
PTP4A1-207ENST00000639568 MST1RQ04912 1400 aa17.39■□□□□ 0.38
PTP4A1-207ENST00000639568 ATRNO75882 1429 aa17.37■□□□□ 0.37
PTP4A1-207ENST00000639568 ABCC5O15440 1437 aa17.36■□□□□ 0.37
PTP4A1-207ENST00000639568 BLMP54132 1417 aaPredicted RBP17.36■□□□□ 0.37
PTP4A1-207ENST00000639568 DEFB132Q7Z7B7 95 aa17.35■□□□□ 0.37
PTP4A1-207ENST00000639568 CHIC2Q9UKJ5 165 aa17.35■□□□□ 0.37
PTP4A1-207ENST00000639568 ANKRD30AQ9BXX3 1397 aa17.35■□□□□ 0.37
PTP4A1-207ENST00000639568 PTCH1Q13635 1447 aa17.35■□□□□ 0.37
PTP4A1-207ENST00000639568 TRPM2O94759 1503 aa17.34■□□□□ 0.37
PTP4A1-207ENST00000639568 NHSL1Q5SYE7 1610 aa17.34■□□□□ 0.37
PTP4A1-207ENST00000639568 RPRD2Q5VT52 1461 aaKnown RBP17.34■□□□□ 0.37
PTP4A1-207ENST00000639568 GJD4Q96KN9 370 aaPredicted RBP17.34■□□□□ 0.37
PTP4A1-207ENST00000639568 PTPRUQ92729 1446 aa17.33■□□□□ 0.36
PTP4A1-207ENST00000639568 KANK4Q5T7N3 995 aaPredicted RBP17.3■□□□□ 0.36
PTP4A1-207ENST00000639568 TMEM131LA2VDJ0 1609 aa17.29■□□□□ 0.36
PTP4A1-207ENST00000639568 LRP5O75197 1615 aa17.29■□□□□ 0.36
PTP4A1-207ENST00000639568 SOS2Q07890 1332 aaPredicted RBP17.29■□□□□ 0.36
PTP4A1-207ENST00000639568 PSDA5PKW4 1024 aaPredicted RBP17.29■□□□□ 0.36
PTP4A1-207ENST00000639568 DAPK1P53355 1430 aa17.29■□□□□ 0.36
PTP4A1-207ENST00000639568 HRCP23327 699 aa17.27■□□□□ 0.36
PTP4A1-207ENST00000639568 ADGRL3Q9HAR2 1447 aa17.27■□□□□ 0.35
PTP4A1-207ENST00000639568 GCC2Q8IWJ2 1684 aa17.26■□□□□ 0.35
PTP4A1-207ENST00000639568 YY1P25490 414 aa17.26■□□□□ 0.35
PTP4A1-207ENST00000639568 C1orf167Q5SNV9 1468 aa17.25■□□□□ 0.35
PTP4A1-207ENST00000639568 BCL9LQ86UU0 1499 aa17.25■□□□□ 0.35
PTP4A1-207ENST00000639568 ORAI2Q96SN7 254 aa17.25■□□□□ 0.35
PTP4A1-207ENST00000639568 MYO5BQ9ULV0 1848 aa17.23■□□□□ 0.35
PTP4A1-207ENST00000639568 BAG6P46379 1132 aa17.22■□□□□ 0.35
PTP4A1-207ENST00000639568 CROCC2H7BZ55 1655 aa17.22■□□□□ 0.35
PTP4A1-207ENST00000639568 METP08581 1390 aa17.21■□□□□ 0.35
PTP4A1-207ENST00000639568 UNC5CLQ8IV45 518 aa17.21■□□□□ 0.35
PTP4A1-207ENST00000639568 SEPT12Q8IYM1 358 aa17.2■□□□□ 0.34
PTP4A1-207ENST00000639568 ZNF326Q5BKZ1 582 aaKnown RBP17.19■□□□□ 0.34
PTP4A1-207ENST00000639568 ANKRD50Q9ULJ7 1429 aa17.18■□□□□ 0.34
PTP4A1-207ENST00000639568 UNC13BO14795 1591 aa17.18■□□□□ 0.34
PTP4A1-207ENST00000639568 XRN1Q8IZH2 1706 aaKnown RBP17.18■□□□□ 0.34
PTP4A1-207ENST00000639568 NPHP3Q7Z494 1330 aa17.18■□□□□ 0.34
PTP4A1-207ENST00000639568 MYOM2P54296 1465 aa17.18■□□□□ 0.34
PTP4A1-207ENST00000639568 RALGAPBQ86X10 1494 aa17.18■□□□□ 0.34
PTP4A1-207ENST00000639568 PTPN23Q9H3S7 1636 aa17.18■□□□□ 0.34
PTP4A1-207ENST00000639568 KRT27Q7Z3Y8 459 aa17.17■□□□□ 0.34
PTP4A1-207ENST00000639568 VPS8Q8N3P4 1428 aa17.16■□□□□ 0.34
PTP4A1-207ENST00000639568 R3HDM1Q15032 1099 aaKnown RBP17.15■□□□□ 0.34
PTP4A1-207ENST00000639568 ESCO1Q5FWF5 840 aa17.15■□□□□ 0.34
PTP4A1-207ENST00000639568 CCDC9Q9Y3X0 531 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms