RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 CRYBG1Q9Y4K1 1723 aa9.58□□□□□ -0.88
NECAP1-213ENST00000638883 ERCC6Q03468 1493 aa9.58□□□□□ -0.88
NECAP1-213ENST00000638883 CLTCQ00610 1675 aaKnown RBP9.57□□□□□ -0.88
NECAP1-213ENST00000638883 NAIPQ13075 1403 aa9.57□□□□□ -0.88
NECAP1-213ENST00000638883 USP35Q9P2H5 1018 aa9.57□□□□□ -0.88
NECAP1-213ENST00000638883 SPRYD3Q8NCJ5 442 aa9.57□□□□□ -0.88
NECAP1-213ENST00000638883 DHX57Q6P158 1386 aaKnown RBP9.57□□□□□ -0.88
NECAP1-213ENST00000638883 KNDC1Q76NI1 1749 aa9.57□□□□□ -0.88
NECAP1-213ENST00000638883 PREX1Q8TCU6 1659 aa9.57□□□□□ -0.88
NECAP1-213ENST00000638883 NRXN1Q9ULB1 1477 aa9.57□□□□□ -0.88
NECAP1-213ENST00000638883 MYOM3Q5VTT5 1437 aa9.57□□□□□ -0.88
NECAP1-213ENST00000638883 PDE4CQ08493 712 aa9.56□□□□□ -0.88
NECAP1-213ENST00000638883 CLTCL1P53675 1640 aa9.56□□□□□ -0.88
NECAP1-213ENST00000638883 ABCB7O75027 752 aa9.56□□□□□ -0.88
NECAP1-213ENST00000638883 HSP90AA1P07900 732 aaKnown RBP9.56□□□□□ -0.88
NECAP1-213ENST00000638883 FER1L4A9Z1Z3 1794 aa9.56□□□□□ -0.88
NECAP1-213ENST00000638883 ABCC5O15440 1437 aa9.55□□□□□ -0.88
NECAP1-213ENST00000638883 SPDYE2BA6NHP3 402 aa9.55□□□□□ -0.88
NECAP1-213ENST00000638883 SPDYE6P0CI01 402 aa9.55□□□□□ -0.88
NECAP1-213ENST00000638883 GSE1Q14687 1217 aa9.55□□□□□ -0.88
NECAP1-213ENST00000638883 SPDYE2Q495Y8 402 aa9.55□□□□□ -0.88
NECAP1-213ENST00000638883 PLA2R1Q13018 1463 aa9.55□□□□□ -0.88
NECAP1-213ENST00000638883 SHPRHQ149N8 1683 aa9.55□□□□□ -0.88
NECAP1-213ENST00000638883 ANKRD26Q9UPS8 1709 aa9.55□□□□□ -0.88
NECAP1-213ENST00000638883 CFAP44Q96MT7 982 aa9.54□□□□□ -0.88
NECAP1-213ENST00000638883 XIRP1Q702N8 1843 aaKnown RBP9.54□□□□□ -0.88
NECAP1-213ENST00000638883 TROQ12816 1431 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-213ENST00000638883 SYCP2Q9BX26 1530 aa9.53□□□□□ -0.88
NECAP1-213ENST00000638883 ZBTB12Q9Y330 459 aaPredicted RBP9.52□□□□□ -0.88
NECAP1-213ENST00000638883 SGIP1Q9BQI5 828 aa9.52□□□□□ -0.89
NECAP1-213ENST00000638883 TOPAZ1Q8N9V7 1692 aa9.52□□□□□ -0.89
NECAP1-213ENST00000638883 EFCAB6Q5THR3 1501 aa9.51□□□□□ -0.89
NECAP1-213ENST00000638883 ADAMTSL3P82987 1691 aa9.51□□□□□ -0.89
NECAP1-213ENST00000638883 ARHGEF28Q8N1W1 1705 aaKnown RBP9.51□□□□□ -0.89
NECAP1-213ENST00000638883 C11orf95C9JLR9 678 aaPredicted RBP9.5□□□□□ -0.89
NECAP1-213ENST00000638883 DAPK1P53355 1430 aa9.5□□□□□ -0.89
NECAP1-213ENST00000638883 ROCK1Q13464 1354 aa9.5□□□□□ -0.89
NECAP1-213ENST00000638883 ARHGEF40Q8TER5 1519 aa9.5□□□□□ -0.89
NECAP1-213ENST00000638883 ZNF692Q9BU19 519 aaPredicted RBP9.5□□□□□ -0.89
NECAP1-213ENST00000638883 ARID4BQ4LE39 1312 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-213ENST00000638883 RBM10P98175 930 aaKnown RBP9.49□□□□□ -0.89
NECAP1-213ENST00000638883 HIRIP3Q9BW71 556 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-213ENST00000638883 PRG4Q92954 1404 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-213ENST00000638883 CAPN15O75808 1086 aa9.48□□□□□ -0.89
NECAP1-213ENST00000638883 UBR1Q8IWV7 1749 aa9.48□□□□□ -0.89
NECAP1-213ENST00000638883 CCER2I3L3R5 266 aa9.48□□□□□ -0.89
NECAP1-213ENST00000638883 FAM43AQ8N2R8 423 aa9.48□□□□□ -0.89
NECAP1-213ENST00000638883 ARXQ96QS3 562 aa9.48□□□□□ -0.89
NECAP1-213ENST00000638883 PNNQ9H307 717 aaKnown RBP9.48□□□□□ -0.89
NECAP1-213ENST00000638883 UACAQ9BZF9 1416 aa9.48□□□□□ -0.89
NECAP1-213ENST00000638883 NRKQ7Z2Y5 1582 aa9.48□□□□□ -0.89
NECAP1-213ENST00000638883 P3H3Q8IVL6 736 aa9.48□□□□□ -0.89
NECAP1-213ENST00000638883 TRPM2O94759 1503 aa9.47□□□□□ -0.89
NECAP1-213ENST00000638883 KIAA1107Q9UPP5 1409 aa9.47□□□□□ -0.89
NECAP1-213ENST00000638883 CHRM1P11229 460 aaPredicted RBP9.47□□□□□ -0.89
NECAP1-213ENST00000638883 C3P01024 1663 aa9.46□□□□□ -0.89
NECAP1-213ENST00000638883 CCNB3Q8WWL7 1395 aa9.46□□□□□ -0.89
NECAP1-213ENST00000638883 ADGRB3O60242 1522 aa9.45□□□□□ -0.9
NECAP1-213ENST00000638883 ASXL1Q8IXJ9 1541 aa9.45□□□□□ -0.9
NECAP1-213ENST00000638883 CADPS2Q86UW7 1296 aa9.45□□□□□ -0.9
NECAP1-213ENST00000638883 CREBZFQ9NS37 354 aa9.45□□□□□ -0.9
NECAP1-213ENST00000638883 RRP9O43818 475 aaKnown RBP9.45□□□□□ -0.9
NECAP1-213ENST00000638883 CHGAP10645 457 aaKnown RBP9.45□□□□□ -0.9
NECAP1-213ENST00000638883 WASHC2AQ641Q2 1341 aa9.45□□□□□ -0.9
NECAP1-213ENST00000638883 FRAT1Q92837 279 aaPredicted RBP9.44□□□□□ -0.9
NECAP1-213ENST00000638883 STRCP1A6NGW2 1772 aa9.44□□□□□ -0.9
NECAP1-213ENST00000638883 AGLP35573 1532 aa9.43□□□□□ -0.9
NECAP1-213ENST00000638883 SPATA31E1Q6ZUB1 1445 aa9.43□□□□□ -0.9
NECAP1-213ENST00000638883 PDIA4P13667 645 aaKnown RBP9.43□□□□□ -0.9
NECAP1-213ENST00000638883 RAB3GAP2Q9H2M9 1393 aa9.43□□□□□ -0.9
NECAP1-213ENST00000638883 ATP7AQ04656 1500 aa9.42□□□□□ -0.9
NECAP1-213ENST00000638883 WASHC2CQ9Y4E1 1318 aa9.42□□□□□ -0.9
NECAP1-213ENST00000638883 COL17A1Q9UMD9 1497 aaPredicted RBP9.42□□□□□ -0.9
NECAP1-213ENST00000638883 FAM9BQ8IZU0 186 aa9.42□□□□□ -0.9
NECAP1-213ENST00000638883 DDRGK1Q96HY6 314 aa9.42□□□□□ -0.9
NECAP1-213ENST00000638883 FGD1P98174 961 aa9.41□□□□□ -0.9
NECAP1-213ENST00000638883 USP32Q8NFA0 1604 aa9.41□□□□□ -0.9
NECAP1-213ENST00000638883 PTPRTO14522 1441 aa9.41□□□□□ -0.9
NECAP1-213ENST00000638883 SIN3AQ96ST3 1273 aa9.41□□□□□ -0.9
NECAP1-213ENST00000638883 SPATA31D1Q6ZQQ2 1576 aa9.41□□□□□ -0.9
NECAP1-213ENST00000638883 PLCH2O75038 1416 aa9.41□□□□□ -0.9
NECAP1-213ENST00000638883 NCOA1Q15788 1441 aa9.41□□□□□ -0.9
NECAP1-213ENST00000638883 ADGRB1O14514 1584 aa9.4□□□□□ -0.9
NECAP1-213ENST00000638883 NALCNQ8IZF0 1738 aa9.4□□□□□ -0.9
NECAP1-213ENST00000638883 KIF1BO60333 1816 aa9.4□□□□□ -0.9
NECAP1-213ENST00000638883 UGGT1Q9NYU2 1555 aa9.4□□□□□ -0.9
NECAP1-213ENST00000638883 MLH3Q9UHC1 1453 aa9.4□□□□□ -0.91
NECAP1-213ENST00000638883 BCL11BQ9C0K0 894 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-213ENST00000638883 PRAG1Q86YV5 1406 aa9.38□□□□□ -0.91
NECAP1-213ENST00000638883 AKAP12Q02952 1782 aa9.38□□□□□ -0.91
NECAP1-213ENST00000638883 AAMPQ13685 434 aa9.38□□□□□ -0.91
NECAP1-213ENST00000638883 NFKBIBQ15653 356 aa9.38□□□□□ -0.91
NECAP1-213ENST00000638883 ABCC3O15438 1527 aa9.38□□□□□ -0.91
NECAP1-213ENST00000638883 CNGB1Q14028 1251 aaPredicted RBP9.37□□□□□ -0.91
NECAP1-213ENST00000638883 RTEL1-TNFRSF6BF6WH68 1400 aa9.37□□□□□ -0.91
NECAP1-213ENST00000638883 NEXMIFQ5QGS0 1516 aa9.37□□□□□ -0.91
NECAP1-213ENST00000638883 VIRMAQ69YN4 1812 aaKnown RBP9.37□□□□□ -0.91
NECAP1-213ENST00000638883 FAM50AQ14320 339 aaKnown RBP9.36□□□□□ -0.91
NECAP1-213ENST00000638883 SETBP1Q9Y6X0 1596 aa9.36□□□□□ -0.91
NECAP1-213ENST00000638883 UHRF1BP1Q6BDS2 1440 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms