RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 CERKQ8TCT0 537 aa32.34■■■□□ 2.77
SCN1B-206ENST00000638536 KIF1BO60333 1816 aa32.34■■■□□ 2.77
SCN1B-206ENST00000638536 HRCP23327 699 aa32.31■■■□□ 2.76
SCN1B-206ENST00000638536 ACIN1Q9UKV3 1341 aaKnown RBP32.31■■■□□ 2.76
SCN1B-206ENST00000638536 STRCP1A6NGW2 1772 aa32.29■■■□□ 2.76
SCN1B-206ENST00000638536 SLC26A8Q96RN1 970 aa32.26■■■□□ 2.75
SCN1B-206ENST00000638536 ZNF326Q5BKZ1 582 aaKnown RBP32.25■■■□□ 2.75
SCN1B-206ENST00000638536 PPP1R15AO75807 674 aaPredicted RBP32.23■■■□□ 2.75
SCN1B-206ENST00000638536 PLEKHG1Q9ULL1 1385 aa32.22■■■□□ 2.75
SCN1B-206ENST00000638536 HDGFP51858 240 aaKnown RBP32.21■■■□□ 2.75
SCN1B-206ENST00000638536 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.21■■■□□ 2.75
SCN1B-206ENST00000638536 CCDC144AA2RUR9 1427 aa32.2■■■□□ 2.75
SCN1B-206ENST00000638536 BCANQ96GW7 911 aa32.2■■■□□ 2.75
SCN1B-206ENST00000638536 NEXMIFQ5QGS0 1516 aa32.2■■■□□ 2.74
SCN1B-206ENST00000638536 ILDR1Q86SU0 546 aaPredicted RBP32.18■■■□□ 2.74
SCN1B-206ENST00000638536 TRIM26Q12899 539 aaPredicted RBP32.17■■■□□ 2.74
SCN1B-206ENST00000638536 ADAMTS13Q76LX8 1427 aa32.14■■■□□ 2.74
SCN1B-206ENST00000638536 ANKRD30BQ9BXX2 1392 aa32.13■■■□□ 2.73
SCN1B-206ENST00000638536 SPATA31E1Q6ZUB1 1445 aa32.12■■■□□ 2.73
SCN1B-206ENST00000638536 CPS1P31327 1500 aa32.12■■■□□ 2.73
SCN1B-206ENST00000638536 NRXN3Q9Y4C0 1643 aa32.12■■■□□ 2.73
SCN1B-206ENST00000638536 FBXO41Q8TF61 875 aa32.11■■■□□ 2.73
SCN1B-206ENST00000638536 RGL3Q3MIN7 710 aa32.11■■■□□ 2.73
SCN1B-206ENST00000638536 PPLO60437 1756 aa32.1■■■□□ 2.73
SCN1B-206ENST00000638536 TBX22Q9Y458 520 aa32.07■■■□□ 2.72
SCN1B-206ENST00000638536 CHD2O14647 1828 aaKnown RBP32.07■■■□□ 2.72
SCN1B-206ENST00000638536 LRRC7Q96NW7 1537 aa32.06■■■□□ 2.72
SCN1B-206ENST00000638536 IQSEC2Q5JU85 1478 aa32.05■■■□□ 2.72
SCN1B-206ENST00000638536 SETBP1Q9Y6X0 1596 aa32.04■■■□□ 2.72
SCN1B-206ENST00000638536 KCNA6P17658 529 aa32.04■■■□□ 2.72
SCN1B-206ENST00000638536 RPGRIP1LQ68CZ1 1315 aa32.04■■■□□ 2.72
SCN1B-206ENST00000638536 XIRP1Q702N8 1843 aaKnown RBP32.03■■■□□ 2.72
SCN1B-206ENST00000638536 IFT172Q9UG01 1749 aa32.02■■■□□ 2.72
SCN1B-206ENST00000638536 DIP2AQ14689 1571 aa32■■■□□ 2.71
SCN1B-206ENST00000638536 NWD1Q149M9 1564 aa32■■■□□ 2.71
SCN1B-206ENST00000638536 VGFO15240 615 aaPredicted RBP32■■■□□ 2.71
SCN1B-206ENST00000638536 RBM33Q96EV2 1170 aaKnown RBP31.99■■■□□ 2.71
SCN1B-206ENST00000638536 ADGRF5Q8IZF2 1346 aa31.97■■■□□ 2.71
SCN1B-206ENST00000638536 PTPRUQ92729 1446 aa31.97■■■□□ 2.71
SCN1B-206ENST00000638536 METP08581 1390 aa31.95■■■□□ 2.71
SCN1B-206ENST00000638536 SETD1AO15047 1707 aaKnown RBP31.94■■■□□ 2.7
SCN1B-206ENST00000638536 TMEM94Q12767 1356 aa31.91■■■□□ 2.7
SCN1B-206ENST00000638536 UBAP1LF5GYI3 381 aa31.91■■■□□ 2.7
SCN1B-206ENST00000638536 PROSER2Q86WR7 435 aaPredicted RBP31.91■■■□□ 2.7
SCN1B-206ENST00000638536 PIK3R4Q99570 1358 aa31.9■■■□□ 2.7
SCN1B-206ENST00000638536 ALKQ9UM73 1620 aa31.9■■■□□ 2.7
SCN1B-206ENST00000638536 NKTRP30414 1462 aaKnown RBP31.9■■■□□ 2.7
SCN1B-206ENST00000638536 AMOTL2Q9Y2J4 779 aa31.89■■■□□ 2.7
SCN1B-206ENST00000638536 DHX57Q6P158 1386 aaKnown RBP31.86■■■□□ 2.69
SCN1B-206ENST00000638536 XRN1Q8IZH2 1706 aaKnown RBP31.85■■■□□ 2.69
SCN1B-206ENST00000638536 PIK3C2GO75747 1445 aa31.82■■■□□ 2.68
SCN1B-206ENST00000638536 MYOM2P54296 1465 aa31.79■■■□□ 2.68
SCN1B-206ENST00000638536 NRXN1Q9ULB1 1477 aa31.79■■■□□ 2.68
SCN1B-206ENST00000638536 TOM1O60784 492 aa31.78■■■□□ 2.68
SCN1B-206ENST00000638536 DCAF11Q8TEB1 546 aa31.78■■■□□ 2.68
SCN1B-206ENST00000638536 SIN3AQ96ST3 1273 aa31.78■■■□□ 2.68
SCN1B-206ENST00000638536 KDM2AQ9Y2K7 1162 aa31.78■■■□□ 2.68
SCN1B-206ENST00000638536 PIP4K2BP78356 416 aa31.77■■■□□ 2.68
SCN1B-206ENST00000638536 PCGF6Q9BYE7 350 aa31.77■■■□□ 2.68
SCN1B-206ENST00000638536 ASXL1Q8IXJ9 1541 aa31.75■■■□□ 2.67
SCN1B-206ENST00000638536 TMEM132EQ6IEE7 984 aa31.74■■■□□ 2.67
SCN1B-206ENST00000638536 CFAP70Q5T0N1 1121 aa31.72■■■□□ 2.67
SCN1B-206ENST00000638536 SCAF1Q9H7N4 1312 aaKnown RBP31.72■■■□□ 2.67
SCN1B-206ENST00000638536 C14orf93Q9H972 538 aaKnown RBP31.71■■■□□ 2.67
SCN1B-206ENST00000638536 ROBO2Q9HCK4 1378 aa31.69■■■□□ 2.66
SCN1B-206ENST00000638536 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.68■■■□□ 2.66
SCN1B-206ENST00000638536 MSH6P52701 1360 aa31.67■■■□□ 2.66
SCN1B-206ENST00000638536 NCOA3Q9Y6Q9 1424 aa31.67■■■□□ 2.66
SCN1B-206ENST00000638536 NEUROD1Q13562 356 aa31.67■■■□□ 2.66
SCN1B-206ENST00000638536 C14orf37Q86TY3 774 aa31.67■■■□□ 2.66
SCN1B-206ENST00000638536 STK26Q9P289 416 aa31.66■■■□□ 2.66
SCN1B-206ENST00000638536 PTCH1Q13635 1447 aa31.63■■■□□ 2.65
SCN1B-206ENST00000638536 PRAG1Q86YV5 1406 aa31.63■■■□□ 2.65
SCN1B-206ENST00000638536 LAMC1P11047 1609 aa31.62■■■□□ 2.65
SCN1B-206ENST00000638536 C19orf44Q9H6X5 657 aa31.62■■■□□ 2.65
SCN1B-206ENST00000638536 NALCNQ8IZF0 1738 aa31.61■■■□□ 2.65
SCN1B-206ENST00000638536 LRPPRCP42704 1394 aaKnown RBP31.6■■■□□ 2.65
SCN1B-206ENST00000638536 YTHDC2Q9H6S0 1430 aaKnown RBP31.6■■■□□ 2.65
SCN1B-206ENST00000638536 L3MBTL2Q969R5 705 aa31.59■■■□□ 2.65
SCN1B-206ENST00000638536 STAC3Q96MF2 364 aa31.58■■■□□ 2.65
SCN1B-206ENST00000638536 KNDC1Q76NI1 1749 aa31.57■■■□□ 2.64
SCN1B-206ENST00000638536 ABCC11Q96J66 1382 aa31.57■■■□□ 2.64
SCN1B-206ENST00000638536 ADGRB1O14514 1584 aa31.57■■■□□ 2.64
SCN1B-206ENST00000638536 HSPA1LP34931 641 aa31.57■■■□□ 2.64
SCN1B-206ENST00000638536 WAPLQ7Z5K2 1190 aa31.57■■■□□ 2.64
SCN1B-206ENST00000638536 TECPR2O15040 1411 aa31.56■■■□□ 2.64
SCN1B-206ENST00000638536 SLAIN2Q9P270 581 aa31.56■■■□□ 2.64
SCN1B-206ENST00000638536 ADGRL3Q9HAR2 1447 aa31.55■■■□□ 2.64
SCN1B-206ENST00000638536 PLEKHH1Q9ULM0 1364 aa31.54■■■□□ 2.64
SCN1B-206ENST00000638536 ROBO1Q9Y6N7 1651 aa31.53■■■□□ 2.64
SCN1B-206ENST00000638536 ATF3P18847 181 aa31.52■■■□□ 2.64
SCN1B-206ENST00000638536 CADPS2Q86UW7 1296 aa31.51■■■□□ 2.63
SCN1B-206ENST00000638536 FAM135BQ49AJ0 1406 aa31.51■■■□□ 2.63
SCN1B-206ENST00000638536 DCCP43146 1447 aa31.49■■■□□ 2.63
SCN1B-206ENST00000638536 NBPF1Q3BBV0 1214 aa31.46■■■□□ 2.63
SCN1B-206ENST00000638536 MST1RQ04912 1400 aa31.45■■■□□ 2.63
SCN1B-206ENST00000638536 TRAK1Q9UPV9 953 aa31.45■■■□□ 2.62
SCN1B-206ENST00000638536 KIAA1210Q9ULL0 1709 aa31.44■■■□□ 2.62
SCN1B-206ENST00000638536 SAFB2Q14151 953 aaKnown RBP eCLIP31.42■■■□□ 2.62
SCN1B-206ENST00000638536 SIRT1Q96EB6 747 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms