RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 COG6Q9Y2V7 657 aa10.88□□□□□ -0.67
CHD2-226ENST00000636881 ADCY10Q96PN6 1610 aa10.88□□□□□ -0.67
CHD2-226ENST00000636881 PTPRGP23470 1445 aa10.88□□□□□ -0.67
CHD2-226ENST00000636881 PLEKHD1A6NEE1 506 aa10.88□□□□□ -0.67
CHD2-226ENST00000636881 E9PSI1 815 aa10.88□□□□□ -0.67
CHD2-226ENST00000636881 CDC42BPAQ5VT25 1732 aa10.88□□□□□ -0.67
CHD2-226ENST00000636881 HNRNPMP52272 730 aaKnown RBP eCLIP10.88□□□□□ -0.674e-7■■■□□ 18.2
CHD2-226ENST00000636881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.88□□□□□ -0.672e-7■■□□□ 14.4
CHD2-226ENST00000636881 ANTXR1Q9H6X2 564 aa10.88□□□□□ -0.67
CHD2-226ENST00000636881 CLCN1P35523 988 aa10.87□□□□□ -0.67
CHD2-226ENST00000636881 SPINK5Q9NQ38 1064 aaPredicted RBP10.87□□□□□ -0.67
CHD2-226ENST00000636881 FAM135AQ9P2D6 1515 aa10.87□□□□□ -0.67
CHD2-226ENST00000636881 PDE3AQ14432 1141 aa10.87□□□□□ -0.67
CHD2-226ENST00000636881 TBC1D2Q9BYX2 928 aa10.87□□□□□ -0.67
CHD2-226ENST00000636881 A2MP01023 1474 aa10.87□□□□□ -0.67
CHD2-226ENST00000636881 CENPJQ9HC77 1338 aaPredicted RBP10.87□□□□□ -0.67
CHD2-226ENST00000636881 MCM4P33991 863 aa10.87□□□□□ -0.67
CHD2-226ENST00000636881 PANK1Q8TE04 598 aa10.87□□□□□ -0.67
CHD2-226ENST00000636881 PANK2Q9BZ23 570 aa10.87□□□□□ -0.67
CHD2-226ENST00000636881 CLASP1Q7Z460 1538 aa10.87□□□□□ -0.67
CHD2-226ENST00000636881 PLB1Q6P1J6 1458 aa10.86□□□□□ -0.67
CHD2-226ENST00000636881 LAMC1P11047 1609 aa10.86□□□□□ -0.67
CHD2-226ENST00000636881 TRMT2AQ8IZ69 625 aaKnown RBP10.86□□□□□ -0.67
CHD2-226ENST00000636881 PMFBP1Q8TBY8 1022 aa10.86□□□□□ -0.67
CHD2-226ENST00000636881 EIF2AK4Q9P2K8 1649 aaKnown RBP10.86□□□□□ -0.67
CHD2-226ENST00000636881 TBC1D32Q96NH3 1257 aa10.85□□□□□ -0.67
CHD2-226ENST00000636881 RRP9O43818 475 aaKnown RBP10.85□□□□□ -0.67
CHD2-226ENST00000636881 NINLQ9Y2I6 1382 aa10.85□□□□□ -0.67
CHD2-226ENST00000636881 FSD2A1L4K1 749 aa10.84□□□□□ -0.67
CHD2-226ENST00000636881 CDCA8Q53HL2 280 aa10.84□□□□□ -0.67
CHD2-226ENST00000636881 MAGI2Q86UL8 1455 aa10.84□□□□□ -0.67
CHD2-226ENST00000636881 MRE11P49959 708 aa10.84□□□□□ -0.67
CHD2-226ENST00000636881 AMER1Q5JTC6 1135 aaPredicted RBP10.84□□□□□ -0.67
CHD2-226ENST00000636881 NLRP1Q9C000 1473 aa10.84□□□□□ -0.67
CHD2-226ENST00000636881 TRAK2O60296 914 aa10.84□□□□□ -0.67
CHD2-226ENST00000636881 CHMP5Q9NZZ3 219 aa10.84□□□□□ -0.67
CHD2-226ENST00000636881 MYH16Q9H6N6 1097 aa10.83□□□□□ -0.68
CHD2-226ENST00000636881 ZMYND15Q9H091 742 aa10.83□□□□□ -0.68
CHD2-226ENST00000636881 PIK3C2GO75747 1445 aa10.83□□□□□ -0.68
CHD2-226ENST00000636881 PDZRN3Q9UPQ7 1066 aa10.83□□□□□ -0.68
CHD2-226ENST00000636881 MYO5CQ9NQX4 1742 aa10.82□□□□□ -0.68
CHD2-226ENST00000636881 WDR7Q9Y4E6 1490 aa10.82□□□□□ -0.68
CHD2-226ENST00000636881 TRIM44Q96DX7 344 aaPredicted RBP10.82□□□□□ -0.68
CHD2-226ENST00000636881 ASXL1Q8IXJ9 1541 aa10.82□□□□□ -0.68
CHD2-226ENST00000636881 NUP160Q12769 1436 aa10.82□□□□□ -0.68
CHD2-226ENST00000636881 ABCC2Q92887 1545 aa10.81□□□□□ -0.68
CHD2-226ENST00000636881 CCDC141Q6ZP82 1450 aa10.81□□□□□ -0.68
CHD2-226ENST00000636881 NGEFQ8N5V2 710 aa10.8□□□□□ -0.68
CHD2-226ENST00000636881 DMRT2Q9Y5R5 561 aa10.8□□□□□ -0.68
CHD2-226ENST00000636881 RWDD1Q9H446 243 aaPredicted RBP10.8□□□□□ -0.68
CHD2-226ENST00000636881 GRPEL1Q9HAV7 217 aa10.8□□□□□ -0.68
CHD2-226ENST00000636881 DDX11L8A8MPP1 907 aa10.8□□□□□ -0.68
CHD2-226ENST00000636881 ESPNB1AK53 854 aa10.8□□□□□ -0.68
CHD2-226ENST00000636881 MFAP1P55081 439 aaKnown RBP10.8□□□□□ -0.68
CHD2-226ENST00000636881 HSCBQ8IWL3 235 aa10.79□□□□□ -0.68
CHD2-226ENST00000636881 MAGI1Q96QZ7 1491 aaPredicted RBP10.79□□□□□ -0.68
CHD2-226ENST00000636881 PLA2R1Q13018 1463 aa10.79□□□□□ -0.68
CHD2-226ENST00000636881 ABCC10Q5T3U5 1492 aa10.79□□□□□ -0.68
CHD2-226ENST00000636881 AAMPQ13685 434 aa10.79□□□□□ -0.68
CHD2-226ENST00000636881 NEUROD2Q15784 382 aa10.79□□□□□ -0.68
CHD2-226ENST00000636881 C22orf23Q9BZE7 217 aa10.79□□□□□ -0.68
CHD2-226ENST00000636881 PCDHB15Q9Y5E8 787 aa10.79□□□□□ -0.68
CHD2-226ENST00000636881 ARHGEF5Q12774 1597 aa10.78□□□□□ -0.68
CHD2-226ENST00000636881 GRIN2AQ12879 1464 aa10.78□□□□□ -0.68
CHD2-226ENST00000636881 CARMIL2Q6F5E8 1435 aa10.78□□□□□ -0.68
CHD2-226ENST00000636881 SYNMO15061 1565 aa10.78□□□□□ -0.68
CHD2-226ENST00000636881 ZMYM3Q14202 1370 aa10.77□□□□□ -0.68
CHD2-226ENST00000636881 SYNJ2O15056 1496 aa10.77□□□□□ -0.69
CHD2-226ENST00000636881 WWC1Q8IX03 1113 aa10.77□□□□□ -0.69
CHD2-226ENST00000636881 ISY1Q9ULR0 285 aaKnown RBP10.77□□□□□ -0.69
CHD2-226ENST00000636881 RSPH4AQ5TD94 716 aa10.76□□□□□ -0.69
CHD2-226ENST00000636881 BCL2L13Q9BXK5 485 aa10.76□□□□□ -0.69
CHD2-226ENST00000636881 RARSP54136 660 aaKnown RBP10.76□□□□□ -0.69
CHD2-226ENST00000636881 FBLN2P98095 1184 aa10.75□□□□□ -0.69
CHD2-226ENST00000636881 CHMP7Q8WUX9 453 aaPredicted RBP10.75□□□□□ -0.69
CHD2-226ENST00000636881 TNNQ9UQP3 1299 aa10.75□□□□□ -0.69
CHD2-226ENST00000636881 RNF17Q9BXT8 1623 aaKnown RBP10.75□□□□□ -0.69
CHD2-226ENST00000636881 NPC1L1Q9UHC9 1359 aa10.75□□□□□ -0.69
CHD2-226ENST00000636881 PLXNC1O60486 1568 aa10.75□□□□□ -0.69
CHD2-226ENST00000636881 RRP7AQ9Y3A4 280 aaKnown RBP10.75□□□□□ -0.69
CHD2-226ENST00000636881 RLBP1P12271 317 aa10.75□□□□□ -0.69
CHD2-226ENST00000636881 TPM2P07951 284 aa10.74□□□□□ -0.69
CHD2-226ENST00000636881 UNC13BO14795 1591 aa10.74□□□□□ -0.69
CHD2-226ENST00000636881 ATP10BO94823 1461 aa10.73□□□□□ -0.69
CHD2-226ENST00000636881 FTSJ3Q8IY81 847 aaKnown RBP10.73□□□□□ -0.69
CHD2-226ENST00000636881 GBP4Q96PP9 640 aa10.73□□□□□ -0.69
CHD2-226ENST00000636881 ERBB4Q15303 1308 aa10.73□□□□□ -0.69
CHD2-226ENST00000636881 IFT140Q96RY7 1462 aa10.73□□□□□ -0.69
CHD2-226ENST00000636881 MRC2Q9UBG0 1479 aa10.73□□□□□ -0.69
CHD2-226ENST00000636881 SCAF11Q99590 1463 aaKnown RBP10.73□□□□□ -0.69
CHD2-226ENST00000636881 JPH4Q96JJ6 628 aa10.72□□□□□ -0.69
CHD2-226ENST00000636881 IQGAP1P46940 1657 aa10.72□□□□□ -0.69
CHD2-226ENST00000636881 HSP90AB1P08238 724 aaKnown RBP10.72□□□□□ -0.69
CHD2-226ENST00000636881 SAMD9LQ8IVG5 1584 aa10.72□□□□□ -0.69
CHD2-226ENST00000636881 ABCA8O94911 1581 aa10.71□□□□□ -0.69
CHD2-226ENST00000636881 ANP32BQ92688 251 aaKnown RBP10.71□□□□□ -0.69
CHD2-226ENST00000636881 IQGAP3Q86VI3 1631 aa10.71□□□□□ -0.69
CHD2-226ENST00000636881 RUNDC1Q96C34 613 aa10.71□□□□□ -0.69
CHD2-226ENST00000636881 MVPQ14764 893 aaKnown RBP10.71□□□□□ -0.7
CHD2-226ENST00000636881 SKOR2Q2VWA4 1001 aaPredicted RBP10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms