RNA–Protein interactions for RNA: ENST00000635929.1

PLCB1-223, Transcript of phospholipase C beta 1, human

TSL 5

Gene PLCB1, Length 2,291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLCB1-223	ENST00000635929	VIRMA	Q69YN4	1812 aa	Known RBP	11.91	□□□□□ -0.5
PLCB1-223	ENST00000635929	LRRIQ1	Q96JM4	1722 aa		11.91	□□□□□ -0.5
PLCB1-223	ENST00000635929	GOLGA6L22	H0YM25	854 aa		11.91	□□□□□ -0.5
PLCB1-223	ENST00000635929	MFAP1	P55081	439 aa	Known RBP	11.91	□□□□□ -0.5
PLCB1-223	ENST00000635929	DMTN	Q08495	405 aa		11.91	□□□□□ -0.5
PLCB1-223	ENST00000635929	PANK1	Q8TE04	598 aa		11.91	□□□□□ -0.5
PLCB1-223	ENST00000635929	NOL7	Q9UMY1	257 aa	Known RBP	11.91	□□□□□ -0.5
PLCB1-223	ENST00000635929	HMGXB3	Q12766	1538 aa		11.9	□□□□□ -0.5
PLCB1-223	ENST00000635929	ANKRD30A	Q9BXX3	1397 aa		11.9	□□□□□ -0.5
PLCB1-223	ENST00000635929	NINL	Q9Y2I6	1382 aa		11.9	□□□□□ -0.5
PLCB1-223	ENST00000635929	GAPVD1	Q14C86	1478 aa		11.9	□□□□□ -0.5
PLCB1-223	ENST00000635929		E9PCH4	1651 aa		11.89	□□□□□ -0.51
PLCB1-223	ENST00000635929	PPP2R1A	P30153	589 aa		11.89	□□□□□ -0.51
PLCB1-223	ENST00000635929	DDIT3	P35638	169 aa		11.89	□□□□□ -0.51
PLCB1-223	ENST00000635929	ARID3A	Q99856	593 aa		11.89	□□□□□ -0.51
PLCB1-223	ENST00000635929	CCDC94	Q9BW85	323 aa	Predicted RBP	11.89	□□□□□ -0.51
PLCB1-223	ENST00000635929	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.89	□□□□□ -0.51
PLCB1-223	ENST00000635929	ZNF644	Q9H582	1327 aa	Predicted RBP	11.89	□□□□□ -0.51
PLCB1-223	ENST00000635929	RAB3GAP1	Q15042	981 aa		11.89	□□□□□ -0.51
PLCB1-223	ENST00000635929	BBX	Q8WY36	941 aa	Predicted RBP	11.89	□□□□□ -0.51
PLCB1-223	ENST00000635929	PRDM10	Q9NQV6	1147 aa		11.89	□□□□□ -0.51
PLCB1-223	ENST00000635929	CTTNBP2	Q8WZ74	1663 aa		11.89	□□□□□ -0.51
PLCB1-223	ENST00000635929	SMC5	Q8IY18	1101 aa		11.88	□□□□□ -0.51
PLCB1-223	ENST00000635929	KNSTRN	Q9Y448	316 aa		11.88	□□□□□ -0.51
PLCB1-223	ENST00000635929	CCDC144A	A2RUR9	1427 aa		11.88	□□□□□ -0.51
PLCB1-223	ENST00000635929	TMF1	P82094	1093 aa		11.88	□□□□□ -0.51
PLCB1-223	ENST00000635929	SNX21	Q969T3	373 aa		11.88	□□□□□ -0.51
PLCB1-223	ENST00000635929	PCDHB15	Q9Y5E8	787 aa		11.88	□□□□□ -0.51
PLCB1-223	ENST00000635929	APAF1	O14727	1248 aa		11.87	□□□□□ -0.51
PLCB1-223	ENST00000635929	HSP90AB1	P08238	724 aa	Known RBP	11.87	□□□□□ -0.51
PLCB1-223	ENST00000635929	XPC	Q01831	940 aa	Predicted RBP	11.87	□□□□□ -0.51
PLCB1-223	ENST00000635929	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.87	□□□□□ -0.51
PLCB1-223	ENST00000635929	SAMD9	Q5K651	1589 aa		11.87	□□□□□ -0.51
PLCB1-223	ENST00000635929	MCM5	P33992	734 aa		11.86	□□□□□ -0.51
PLCB1-223	ENST00000635929	CCDC146	Q8IYE0	955 aa		11.86	□□□□□ -0.51
PLCB1-223	ENST00000635929	NGEF	Q8N5V2	710 aa		11.86	□□□□□ -0.51
PLCB1-223	ENST00000635929	DDX49	Q9Y6V7	483 aa	Known RBP	11.86	□□□□□ -0.51
PLCB1-223	ENST00000635929	ARHGEF12	Q9NZN5	1544 aa		11.86	□□□□□ -0.51
PLCB1-223	ENST00000635929	ZSCAN20	P17040	1043 aa	Predicted RBP	11.86	□□□□□ -0.51
PLCB1-223	ENST00000635929	SASS6	Q6UVJ0	657 aa		11.86	□□□□□ -0.51
PLCB1-223	ENST00000635929	GTPBP4	Q9BZE4	634 aa	Known RBP	11.86	□□□□□ -0.51
PLCB1-223	ENST00000635929	CADPS	Q9ULU8	1353 aa		11.85	□□□□□ -0.51
PLCB1-223	ENST00000635929	KIF20A	O95235	890 aa		11.85	□□□□□ -0.51
PLCB1-223	ENST00000635929	KLHL40	Q2TBA0	621 aa		11.85	□□□□□ -0.51
PLCB1-223	ENST00000635929	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.85	□□□□□ -0.51
PLCB1-223	ENST00000635929	ARID3C	A6NKF2	412 aa		11.85	□□□□□ -0.51
PLCB1-223	ENST00000635929	CC2D2A	Q9P2K1	1620 aa		11.85	□□□□□ -0.51
PLCB1-223	ENST00000635929	SCAPER	Q9BY12	1400 aa		11.84	□□□□□ -0.51
PLCB1-223	ENST00000635929	CUL7	Q14999	1698 aa		11.84	□□□□□ -0.51
PLCB1-223	ENST00000635929	EPRS	P07814	1512 aa	Known RBP	11.84	□□□□□ -0.51
PLCB1-223	ENST00000635929	ABCA10	Q8WWZ4	1543 aa		11.84	□□□□□ -0.51
PLCB1-223	ENST00000635929	ZKSCAN5	Q9Y2L8	839 aa		11.84	□□□□□ -0.51
PLCB1-223	ENST00000635929	RAD54L2	Q9Y4B4	1467 aa		11.84	□□□□□ -0.51
PLCB1-223	ENST00000635929	NUP155	O75694	1391 aa		11.83	□□□□□ -0.52
PLCB1-223	ENST00000635929	NBPF1	Q3BBV0	1214 aa		11.83	□□□□□ -0.52
PLCB1-223	ENST00000635929	TESK2	Q96S53	571 aa		11.83	□□□□□ -0.52
PLCB1-223	ENST00000635929	DNMT1	P26358	1616 aa	Known RBP	11.83	□□□□□ -0.52
PLCB1-223	ENST00000635929	PPP4R3B	Q5MIZ7	849 aa		11.83	□□□□□ -0.52
PLCB1-223	ENST00000635929	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.83	□□□□□ -0.52
PLCB1-223	ENST00000635929	NCOA3	Q9Y6Q9	1424 aa		11.82	□□□□□ -0.52
PLCB1-223	ENST00000635929	LETM1	O95202	739 aa	Predicted RBP	11.82	□□□□□ -0.52
PLCB1-223	ENST00000635929	RBM25	P49756	843 aa	Known RBP	11.82	□□□□□ -0.52
PLCB1-223	ENST00000635929	ZNF445	P59923	1031 aa		11.82	□□□□□ -0.52
PLCB1-223	ENST00000635929	PDLIM2	Q96JY6	352 aa		11.81	□□□□□ -0.52
PLCB1-223	ENST00000635929	DISP3	Q9P2K9	1392 aa		11.81	□□□□□ -0.52
PLCB1-223	ENST00000635929	KIAA0586	Q9BVV6	1533 aa		11.8	□□□□□ -0.52
PLCB1-223	ENST00000635929	CLEC17A	Q6ZS10	378 aa		11.8	□□□□□ -0.52
PLCB1-223	ENST00000635929	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.8	□□□□□ -0.52
PLCB1-223	ENST00000635929	CCDC39	Q9UFE4	941 aa		11.8	□□□□□ -0.52
PLCB1-223	ENST00000635929	GTF2E1	P29083	439 aa	Predicted RBP	11.79	□□□□□ -0.52
PLCB1-223	ENST00000635929	RARS	P54136	660 aa	Known RBP	11.79	□□□□□ -0.52
PLCB1-223	ENST00000635929	STAC3	Q96MF2	364 aa		11.79	□□□□□ -0.52
PLCB1-223	ENST00000635929	CLASP1	Q7Z460	1538 aa		11.79	□□□□□ -0.52
PLCB1-223	ENST00000635929	CAMSAP2	Q08AD1	1489 aa		11.79	□□□□□ -0.52
PLCB1-223	ENST00000635929	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.79	□□□□□ -0.52
PLCB1-223	ENST00000635929	CBX1	P83916	185 aa		11.79	□□□□□ -0.52
PLCB1-223	ENST00000635929	RGL3	Q3MIN7	710 aa		11.79	□□□□□ -0.52
PLCB1-223	ENST00000635929	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.79	□□□□□ -0.52
PLCB1-223	ENST00000635929	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.78	□□□□□ -0.52
PLCB1-223	ENST00000635929	ERBIN	Q96RT1	1412 aa		11.78	□□□□□ -0.52
PLCB1-223	ENST00000635929	BAG4	O95429	457 aa	Known RBP	11.78	□□□□□ -0.52
PLCB1-223	ENST00000635929	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.78	□□□□□ -0.52
PLCB1-223	ENST00000635929	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.78	□□□□□ -0.52
PLCB1-223	ENST00000635929	TAF3	Q5VWG9	929 aa		11.78	□□□□□ -0.52
PLCB1-223	ENST00000635929	RBSN	Q9H1K0	784 aa		11.78	□□□□□ -0.52
PLCB1-223	ENST00000635929	FOXD4L1	Q9NU39	408 aa		11.78	□□□□□ -0.52
PLCB1-223	ENST00000635929	ANKRD50	Q9ULJ7	1429 aa		11.78	□□□□□ -0.52
PLCB1-223	ENST00000635929	PDIA4	P13667	645 aa	Known RBP	11.77	□□□□□ -0.52
PLCB1-223	ENST00000635929	ZSCAN23	Q3MJ62	389 aa		11.77	□□□□□ -0.52
PLCB1-223	ENST00000635929	WWC1	Q8IX03	1113 aa		11.77	□□□□□ -0.52
PLCB1-223	ENST00000635929	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.77	□□□□□ -0.52
PLCB1-223	ENST00000635929	DMRT2	Q9Y5R5	561 aa		11.77	□□□□□ -0.52
PLCB1-223	ENST00000635929	NES	P48681	1621 aa		11.77	□□□□□ -0.53
PLCB1-223	ENST00000635929		K7ELQ4	463 aa	Predicted RBP	11.77	□□□□□ -0.53
PLCB1-223	ENST00000635929	RLBP1	P12271	317 aa		11.77	□□□□□ -0.53
PLCB1-223	ENST00000635929	SSFA2	P28290	1259 aa		11.77	□□□□□ -0.53
PLCB1-223	ENST00000635929	CAVIN1	Q6NZI2	390 aa	Known RBP	11.77	□□□□□ -0.53
PLCB1-223	ENST00000635929	MYRIP	Q8NFW9	859 aa		11.77	□□□□□ -0.53
PLCB1-223	ENST00000635929	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.77	□□□□□ -0.53
PLCB1-223	ENST00000635929	HMGN5	P82970	282 aa	Known RBP	11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms