RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 ANKLE2Q86XL3 938 aa27.36■■□□□ 1.97
MECP2-216ENST00000627864 NCKAP5LQ9HCH0 1330 aa27.36■■□□□ 1.97
MECP2-216ENST00000627864 TXNDC2Q86VQ3 553 aa27.35■■□□□ 1.97
MECP2-216ENST00000627864 EID1Q9Y6B2 187 aa27.35■■□□□ 1.97
MECP2-216ENST00000627864 HDGFP51858 240 aaKnown RBP27.34■■□□□ 1.97
MECP2-216ENST00000627864 NUTM2DQ5VT03 806 aaPredicted RBP27.34■■□□□ 1.97
MECP2-216ENST00000627864 IFT172Q9UG01 1749 aa27.33■■□□□ 1.97
MECP2-216ENST00000627864 LTKP29376 864 aa27.33■■□□□ 1.97
MECP2-216ENST00000627864 ZFYVE9O95405 1425 aa27.33■■□□□ 1.96
MECP2-216ENST00000627864 NEXMIFQ5QGS0 1516 aa27.32■■□□□ 1.96
MECP2-216ENST00000627864 RPGRIP1LQ68CZ1 1315 aa27.32■■□□□ 1.96
MECP2-216ENST00000627864 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.31■■□□□ 1.96
MECP2-216ENST00000627864 CLSPNQ9HAW4 1339 aa27.31■■□□□ 1.96
MECP2-216ENST00000627864 SCAF11Q99590 1463 aaKnown RBP27.31■■□□□ 1.96
MECP2-216ENST00000627864 PPP1R15AO75807 674 aaPredicted RBP27.3■■□□□ 1.96
MECP2-216ENST00000627864 SENP3Q9H4L4 574 aaPredicted RBP27.27■■□□□ 1.96
MECP2-216ENST00000627864 IQGAP1P46940 1657 aa27.24■■□□□ 1.95
MECP2-216ENST00000627864 VGFO15240 615 aaPredicted RBP27.24■■□□□ 1.95
MECP2-216ENST00000627864 DCAF11Q8TEB1 546 aa27.24■■□□□ 1.95
MECP2-216ENST00000627864 BCANQ96GW7 911 aa27.24■■□□□ 1.95
MECP2-216ENST00000627864 NPHP4O75161 1426 aaPredicted RBP27.24■■□□□ 1.95
MECP2-216ENST00000627864 KDM2AQ9Y2K7 1162 aa27.23■■□□□ 1.95
MECP2-216ENST00000627864 MED14O60244 1454 aa27.22■■□□□ 1.95
MECP2-216ENST00000627864 L3MBTL2Q969R5 705 aa27.2■■□□□ 1.94
MECP2-216ENST00000627864 PLEKHG1Q9ULL1 1385 aa27.2■■□□□ 1.94
MECP2-216ENST00000627864 DMRT2Q9Y5R5 561 aa27.19■■□□□ 1.94
MECP2-216ENST00000627864 TONSLQ96HA7 1378 aa27.19■■□□□ 1.94
MECP2-216ENST00000627864 ADGRF5Q8IZF2 1346 aa27.18■■□□□ 1.94
MECP2-216ENST00000627864 MYOM2P54296 1465 aa27.16■■□□□ 1.94
MECP2-216ENST00000627864 STAC3Q96MF2 364 aa27.14■■□□□ 1.94
MECP2-216ENST00000627864 NRXN3Q9Y4C0 1643 aa27.14■■□□□ 1.94
MECP2-216ENST00000627864 SLC26A8Q96RN1 970 aa27.13■■□□□ 1.93
MECP2-216ENST00000627864 SETBP1Q9Y6X0 1596 aa27.12■■□□□ 1.93
MECP2-216ENST00000627864 NRXN1Q9ULB1 1477 aa27.09■■□□□ 1.93
MECP2-216ENST00000627864 ADAMTS13Q76LX8 1427 aa27.08■■□□□ 1.93
MECP2-216ENST00000627864 ALKQ9UM73 1620 aa27.08■■□□□ 1.93
MECP2-216ENST00000627864 PIK3C2GO75747 1445 aa27.07■■□□□ 1.92
MECP2-216ENST00000627864 DIP2AQ14689 1571 aa27.07■■□□□ 1.92
MECP2-216ENST00000627864 TIMELESSQ9UNS1 1208 aa27.06■■□□□ 1.92
MECP2-216ENST00000627864 TBX22Q9Y458 520 aa27.06■■□□□ 1.92
MECP2-216ENST00000627864 SETD1AO15047 1707 aaKnown RBP27.06■■□□□ 1.92
MECP2-216ENST00000627864 LAMC1P11047 1609 aa27.04■■□□□ 1.92
MECP2-216ENST00000627864 CHD2O14647 1828 aaKnown RBP27.03■■□□□ 1.92
MECP2-216ENST00000627864 PRAG1Q86YV5 1406 aa27.02■■□□□ 1.92
MECP2-216ENST00000627864 CFAP70Q5T0N1 1121 aa27.02■■□□□ 1.92
MECP2-216ENST00000627864 C14orf93Q9H972 538 aaKnown RBP27.01■■□□□ 1.91
MECP2-216ENST00000627864 KIAA1210Q9ULL0 1709 aa27■■□□□ 1.91
MECP2-216ENST00000627864 STRCP1A6NGW2 1772 aa26.99■■□□□ 1.91
MECP2-216ENST00000627864 METP08581 1390 aa26.98■■□□□ 1.91
MECP2-216ENST00000627864 NBPF8Q3BBV2 869 aa26.97■■□□□ 1.91
MECP2-216ENST00000627864 ZNF335Q9H4Z2 1342 aaPredicted RBP26.96■■□□□ 1.91
MECP2-216ENST00000627864 TRPM1Q7Z4N2 1603 aa26.96■■□□□ 1.91
MECP2-216ENST00000627864 TMEM132EQ6IEE7 984 aa26.95■■□□□ 1.9
MECP2-216ENST00000627864 PIK3R4Q99570 1358 aa26.95■■□□□ 1.9
MECP2-216ENST00000627864 KCNA6P17658 529 aa26.93■■□□□ 1.9
MECP2-216ENST00000627864 ASXL1Q8IXJ9 1541 aa26.92■■□□□ 1.9
MECP2-216ENST00000627864 PTPRUQ92729 1446 aa26.91■■□□□ 1.9
MECP2-216ENST00000627864 AMOTL2Q9Y2J4 779 aa26.91■■□□□ 1.9
MECP2-216ENST00000627864 NWD1Q149M9 1564 aa26.9■■□□□ 1.9
MECP2-216ENST00000627864 NBPF1Q3BBV0 1214 aa26.9■■□□□ 1.9
MECP2-216ENST00000627864 STK26Q9P289 416 aa26.89■■□□□ 1.9
MECP2-216ENST00000627864 XRN1Q8IZH2 1706 aaKnown RBP26.89■■□□□ 1.9
MECP2-216ENST00000627864 ADGRB1O14514 1584 aa26.88■■□□□ 1.89
MECP2-216ENST00000627864 YTHDC2Q9H6S0 1430 aaKnown RBP26.86■■□□□ 1.89
MECP2-216ENST00000627864 LTBP4Q8N2S1 1624 aa26.86■■□□□ 1.89
MECP2-216ENST00000627864 KNDC1Q76NI1 1749 aa26.85■■□□□ 1.89
MECP2-216ENST00000627864 LRPPRCP42704 1394 aaKnown RBP26.84■■□□□ 1.89
MECP2-216ENST00000627864 ROCK2O75116 1388 aaKnown RBP26.84■■□□□ 1.89
MECP2-216ENST00000627864 RALGAPBQ86X10 1494 aa26.82■■□□□ 1.88
MECP2-216ENST00000627864 CPS1P31327 1500 aa26.82■■□□□ 1.88
MECP2-216ENST00000627864 PROSER2Q86WR7 435 aaPredicted RBP26.82■■□□□ 1.88
MECP2-216ENST00000627864 NKTRP30414 1462 aaKnown RBP26.81■■□□□ 1.88
MECP2-216ENST00000627864 XIRP1Q702N8 1843 aaKnown RBP26.81■■□□□ 1.88
MECP2-216ENST00000627864 TRAK1Q9UPV9 953 aa26.8■■□□□ 1.88
MECP2-216ENST00000627864 ABCC11Q96J66 1382 aa26.8■■□□□ 1.88
MECP2-216ENST00000627864 ARHGEF28Q8N1W1 1705 aaKnown RBP26.77■■□□□ 1.88
MECP2-216ENST00000627864 LRRC7Q96NW7 1537 aa26.77■■□□□ 1.88
MECP2-216ENST00000627864 RBM33Q96EV2 1170 aaKnown RBP26.77■■□□□ 1.88
MECP2-216ENST00000627864 TECPR2O15040 1411 aa26.76■■□□□ 1.87
MECP2-216ENST00000627864 ROBO2Q9HCK4 1378 aa26.76■■□□□ 1.87
MECP2-216ENST00000627864 CARD11Q9BXL7 1154 aa26.76■■□□□ 1.87
MECP2-216ENST00000627864 PTCH1Q13635 1447 aa26.74■■□□□ 1.87
MECP2-216ENST00000627864 GPRASP1Q5JY77 1395 aa26.74■■□□□ 1.87
MECP2-216ENST00000627864 DLC1Q96QB1 1528 aa26.74■■□□□ 1.87
MECP2-216ENST00000627864 WAPLQ7Z5K2 1190 aa26.73■■□□□ 1.87
MECP2-216ENST00000627864 TMEM94Q12767 1356 aa26.72■■□□□ 1.87
MECP2-216ENST00000627864 SIRT1Q96EB6 747 aa26.72■■□□□ 1.87
MECP2-216ENST00000627864 POGKQ9P215 609 aa26.71■■□□□ 1.87
MECP2-216ENST00000627864 PRAM1Q96QH2 718 aa26.7■■□□□ 1.86
MECP2-216ENST00000627864 FAM135BQ49AJ0 1406 aa26.69■■□□□ 1.86
MECP2-216ENST00000627864 C14orf37Q86TY3 774 aa26.69■■□□□ 1.86
MECP2-216ENST00000627864 PLEKHH1Q9ULM0 1364 aa26.69■■□□□ 1.86
MECP2-216ENST00000627864 ZEB1P37275 1124 aaPredicted RBP26.68■■□□□ 1.86
MECP2-216ENST00000627864 SAFB2Q14151 953 aaKnown RBP eCLIP26.68■■□□□ 1.86
MECP2-216ENST00000627864 CERKQ8TCT0 537 aa26.68■■□□□ 1.86
MECP2-216ENST00000627864 NALCNQ8IZF0 1738 aa26.67■■□□□ 1.86
MECP2-216ENST00000627864 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.67■■□□□ 1.86
MECP2-216ENST00000627864 NCOA3Q9Y6Q9 1424 aa26.65■■□□□ 1.86
MECP2-216ENST00000627864 QRICH2Q9H0J4 1663 aa26.64■■□□□ 1.86
MECP2-216ENST00000627864 EIF3AQ14152 1382 aaKnown RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms