RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 TCERG1O14776 1098 aaKnown RBP25.41■■□□□ 1.66
PTBP1-220ENST00000627714 SLC24A1O60721 1099 aa25.41■■□□□ 1.66
PTBP1-220ENST00000627714 NPC1L1Q9UHC9 1359 aa25.41■■□□□ 1.66
PTBP1-220ENST00000627714 AFAP1Q8N556 730 aa25.41■■□□□ 1.66
PTBP1-220ENST00000627714 CDCA7LQ96GN5 454 aa25.4■■□□□ 1.66
PTBP1-220ENST00000627714 ASXL1Q8IXJ9 1541 aa25.4■■□□□ 1.66
PTBP1-220ENST00000627714 FANCAO15360 1455 aa25.39■■□□□ 1.66
PTBP1-220ENST00000627714 PIK3C2GO75747 1445 aa25.37■■□□□ 1.65
PTBP1-220ENST00000627714 IPO9Q96P70 1041 aaKnown RBP25.37■■□□□ 1.65
PTBP1-220ENST00000627714 AMER1Q5JTC6 1135 aaPredicted RBP25.37■■□□□ 1.65
PTBP1-220ENST00000627714 MYOM2P54296 1465 aa25.37■■□□□ 1.65
PTBP1-220ENST00000627714 MYOM1P52179 1685 aa25.36■■□□□ 1.65
PTBP1-220ENST00000627714 PPP2R1AP30153 589 aa25.36■■□□□ 1.65
PTBP1-220ENST00000627714 KDM5AP29375 1690 aaKnown RBP25.36■■□□□ 1.65
PTBP1-220ENST00000627714 MS4A1P11836 297 aa25.35■■□□□ 1.65
PTBP1-220ENST00000627714 WDR43Q15061 677 aaKnown RBP eCLIP25.34■■□□□ 1.658e-6■■□□□ 11.7
PTBP1-220ENST00000627714 ADAMTS8Q9UP79 889 aa25.34■■□□□ 1.65
PTBP1-220ENST00000627714 MAP3K4Q9Y6R4 1608 aa25.33■■□□□ 1.64
PTBP1-220ENST00000627714 ADGRL1O94910 1474 aa25.32■■□□□ 1.64
PTBP1-220ENST00000627714 MROH1Q8NDA8 1641 aa25.31■■□□□ 1.64
PTBP1-220ENST00000627714 KIF1BO60333 1816 aa25.29■■□□□ 1.64
PTBP1-220ENST00000627714 EFCAB6Q5THR3 1501 aa25.29■■□□□ 1.64
PTBP1-220ENST00000627714 KIF3BO15066 747 aa25.27■■□□□ 1.64
PTBP1-220ENST00000627714 IFT172Q9UG01 1749 aa25.27■■□□□ 1.64
PTBP1-220ENST00000627714 ABCA6Q8N139 1617 aa25.27■■□□□ 1.64
PTBP1-220ENST00000627714 ZNF521Q96K83 1311 aa25.26■■□□□ 1.63
PTBP1-220ENST00000627714 ZBTB47Q9UFB7 747 aaPredicted RBP25.26■■□□□ 1.63
PTBP1-220ENST00000627714 LMTK2Q8IWU2 1503 aa25.25■■□□□ 1.63
PTBP1-220ENST00000627714 PAK3O75914 559 aaPredicted RBP25.24■■□□□ 1.63
PTBP1-220ENST00000627714 PLEKHH1Q9ULM0 1364 aa25.24■■□□□ 1.63
PTBP1-220ENST00000627714 MYO3AQ8NEV4 1616 aa25.24■■□□□ 1.63
PTBP1-220ENST00000627714 CRBNQ96SW2 442 aa25.23■■□□□ 1.63
PTBP1-220ENST00000627714 NRXN1Q9ULB1 1477 aa25.22■■□□□ 1.63
PTBP1-220ENST00000627714 PLIN1O60240 522 aa25.22■■□□□ 1.63
PTBP1-220ENST00000627714 PDE4AP27815 886 aa25.22■■□□□ 1.63
PTBP1-220ENST00000627714 GOLGA2Q08379 1002 aa25.22■■□□□ 1.63
PTBP1-220ENST00000627714 DUSP27Q5VZP5 1158 aa25.22■■□□□ 1.63
PTBP1-220ENST00000627714 SBNO2Q9Y2G9 1366 aa25.22■■□□□ 1.63
PTBP1-220ENST00000627714 ERVK-7P63135 1459 aa25.21■■□□□ 1.63
PTBP1-220ENST00000627714 BACH2Q9BYV9 841 aa25.21■■□□□ 1.63
PTBP1-220ENST00000627714 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.2■■□□□ 1.62
PTBP1-220ENST00000627714 KIDINS220Q9ULH0 1771 aa25.2■■□□□ 1.62
PTBP1-220ENST00000627714 PPRC1Q5VV67 1664 aaKnown RBP25.19■■□□□ 1.62
PTBP1-220ENST00000627714 NGEFQ8N5V2 710 aa25.18■■□□□ 1.62
PTBP1-220ENST00000627714 SETBP1Q9Y6X0 1596 aa25.18■■□□□ 1.62
PTBP1-220ENST00000627714 UGGT1Q9NYU2 1555 aa25.18■■□□□ 1.62
PTBP1-220ENST00000627714 ZNF518AQ6AHZ1 1483 aa25.17■■□□□ 1.62
PTBP1-220ENST00000627714 ASXL2Q76L83 1435 aa25.16■■□□□ 1.62
PTBP1-220ENST00000627714 CFAP70Q5T0N1 1121 aa25.16■■□□□ 1.62
PTBP1-220ENST00000627714 MROH2AA6NES4 1674 aa25.16■■□□□ 1.62
PTBP1-220ENST00000627714 BCL11AQ9H165 835 aa25.16■■□□□ 1.62
PTBP1-220ENST00000627714 ADGRB3O60242 1522 aa25.15■■□□□ 1.62
PTBP1-220ENST00000627714 ADGRF5Q8IZF2 1346 aa25.14■■□□□ 1.62
PTBP1-220ENST00000627714 SLFN5Q08AF3 891 aa25.14■■□□□ 1.61
PTBP1-220ENST00000627714 CFAP74Q9C0B2 1584 aa25.13■■□□□ 1.61
PTBP1-220ENST00000627714 TRMT2AQ8IZ69 625 aaKnown RBP25.13■■□□□ 1.61
PTBP1-220ENST00000627714 KDM2BQ8NHM5 1336 aa25.11■■□□□ 1.61
PTBP1-220ENST00000627714 CENPQQ7L2Z9 268 aaPredicted RBP25.11■■□□□ 1.61
PTBP1-220ENST00000627714 NKTRP30414 1462 aaKnown RBP25.09■■□□□ 1.61
PTBP1-220ENST00000627714 C20orf194Q5TEA3 1177 aa25.09■■□□□ 1.61
PTBP1-220ENST00000627714 POLR3AO14802 1390 aaPredicted RBP25.06■■□□□ 1.6
PTBP1-220ENST00000627714 PPLO60437 1756 aa25.06■■□□□ 1.6
PTBP1-220ENST00000627714 E9PSI1 815 aa25.06■■□□□ 1.6
PTBP1-220ENST00000627714 NBR1Q14596 966 aa25.06■■□□□ 1.6
PTBP1-220ENST00000627714 CENPJQ9HC77 1338 aaPredicted RBP25.06■■□□□ 1.6
PTBP1-220ENST00000627714 NOS1P29475 1434 aa25.05■■□□□ 1.6
PTBP1-220ENST00000627714 ZC3H13Q5T200 1668 aaKnown RBP25.05■■□□□ 1.6
PTBP1-220ENST00000627714 DEKP35659 375 aaKnown RBP25.05■■□□□ 1.6
PTBP1-220ENST00000627714 NPM2Q86SE8 214 aaKnown RBP25.05■■□□□ 1.6
PTBP1-220ENST00000627714 CARD14Q9BXL6 1004 aa25.05■■□□□ 1.6
PTBP1-220ENST00000627714 MLH3Q9UHC1 1453 aa25.04■■□□□ 1.6
PTBP1-220ENST00000627714 RTL5Q5HYW3 569 aaPredicted RBP25.04■■□□□ 1.6
PTBP1-220ENST00000627714 APAF1O14727 1248 aa25.03■■□□□ 1.6
PTBP1-220ENST00000627714 POGZQ7Z3K3 1410 aa25.03■■□□□ 1.6
PTBP1-220ENST00000627714 CCDC146Q8IYE0 955 aa25.02■■□□□ 1.6
PTBP1-220ENST00000627714 DDRGK1Q96HY6 314 aa25.02■■□□□ 1.6
PTBP1-220ENST00000627714 RPGRIP1LQ68CZ1 1315 aa25.02■■□□□ 1.6
PTBP1-220ENST00000627714 NPATQ14207 1427 aa25.01■■□□□ 1.59
PTBP1-220ENST00000627714 USP32Q8NFA0 1604 aa25.01■■□□□ 1.59
PTBP1-220ENST00000627714 QRICH2Q9H0J4 1663 aa25.01■■□□□ 1.59
PTBP1-220ENST00000627714 HECW2Q9P2P5 1572 aa25■■□□□ 1.59
PTBP1-220ENST00000627714 C14orf93Q9H972 538 aaKnown RBP24.99■■□□□ 1.59
PTBP1-220ENST00000627714 NINLQ9Y2I6 1382 aa24.99■■□□□ 1.59
PTBP1-220ENST00000627714 ADGRB1O14514 1584 aa24.99■■□□□ 1.59
PTBP1-220ENST00000627714 FRMPD1Q5SYB0 1578 aa24.99■■□□□ 1.59
PTBP1-220ENST00000627714 NPM1P06748 294 aaKnown RBP eCLIP24.96■■□□□ 1.59
PTBP1-220ENST00000627714 NSD3Q9BZ95 1437 aa24.96■■□□□ 1.59
PTBP1-220ENST00000627714 CD109Q6YHK3 1445 aa24.95■■□□□ 1.58
PTBP1-220ENST00000627714 PUS7Q96PZ0 661 aaKnown RBP24.94■■□□□ 1.58
PTBP1-220ENST00000627714 SHPRHQ149N8 1683 aa24.94■■□□□ 1.58
PTBP1-220ENST00000627714 USP35Q9P2H5 1018 aa24.94■■□□□ 1.58
PTBP1-220ENST00000627714 ABCC3O15438 1527 aa24.94■■□□□ 1.58
PTBP1-220ENST00000627714 SPINK5Q9NQ38 1064 aaPredicted RBP24.93■■□□□ 1.58
PTBP1-220ENST00000627714 CHGAP10645 457 aaKnown RBP24.93■■□□□ 1.58
PTBP1-220ENST00000627714 MORC1Q86VD1 984 aa24.92■■□□□ 1.58
PTBP1-220ENST00000627714 PPM1GO15355 546 aaPredicted RBP24.91■■□□□ 1.58
PTBP1-220ENST00000627714 PDE3AQ14432 1141 aa24.91■■□□□ 1.58
PTBP1-220ENST00000627714 FAM161AQ3B820 660 aa24.91■■□□□ 1.58
PTBP1-220ENST00000627714 TRAK1Q9UPV9 953 aa24.9■■□□□ 1.58
PTBP1-220ENST00000627714 CAMSAP1Q5T5Y3 1602 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms