RNA–Protein interactions for RNA: ENST00000626993.2

HIPK1-211, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 5 BASIC

Gene HIPK1, Length 8,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-211ENST00000626993 MYT1Q01538 1121 aa9.79□□□□□ -0.84
HIPK1-211ENST00000626993 PPM1GO15355 546 aaPredicted RBP9.79□□□□□ -0.84
HIPK1-211ENST00000626993 CDC42BPBQ9Y5S2 1711 aa9.79□□□□□ -0.84
HIPK1-211ENST00000626993 NBPF1Q3BBV0 1214 aa9.79□□□□□ -0.84
HIPK1-211ENST00000626993 ATAD2Q6PL18 1390 aa9.79□□□□□ -0.84
HIPK1-211ENST00000626993 ZBED9Q6R2W3 1325 aa9.79□□□□□ -0.84
HIPK1-211ENST00000626993 TNNT2P45379 298 aaPredicted RBP9.78□□□□□ -0.84
HIPK1-211ENST00000626993 UNC13BO14795 1591 aa9.78□□□□□ -0.84
HIPK1-211ENST00000626993 U2SURPO15042 1029 aaKnown RBP9.78□□□□□ -0.84
HIPK1-211ENST00000626993 IQGAP3Q86VI3 1631 aa9.77□□□□□ -0.84
HIPK1-211ENST00000626993 NINLQ9Y2I6 1382 aa9.77□□□□□ -0.84
HIPK1-211ENST00000626993 MINK1Q8N4C8 1332 aaPredicted RBP9.77□□□□□ -0.85
HIPK1-211ENST00000626993 NOS1P29475 1434 aa9.76□□□□□ -0.85
HIPK1-211ENST00000626993 MYH16Q9H6N6 1097 aa9.76□□□□□ -0.85
HIPK1-211ENST00000626993 TET3O43151 1660 aa9.76□□□□□ -0.85
HIPK1-211ENST00000626993 TRPM2O94759 1503 aa9.76□□□□□ -0.85
HIPK1-211ENST00000626993 TNRQ92752 1358 aa9.75□□□□□ -0.85
HIPK1-211ENST00000626993 SCAF1Q9H7N4 1312 aaKnown RBP9.75□□□□□ -0.85
HIPK1-211ENST00000626993 TXNDC2Q86VQ3 553 aa9.75□□□□□ -0.85
HIPK1-211ENST00000626993 C14orf93Q9H972 538 aaKnown RBP9.75□□□□□ -0.85
HIPK1-211ENST00000626993 NGDNQ8NEJ9 315 aaKnown RBP9.75□□□□□ -0.85
HIPK1-211ENST00000626993 COG3Q96JB2 828 aa9.75□□□□□ -0.85
HIPK1-211ENST00000626993 LMOD3Q0VAK6 560 aa9.75□□□□□ -0.85
HIPK1-211ENST00000626993 CHMP4AQ9BY43 222 aa9.74□□□□□ -0.85
HIPK1-211ENST00000626993 PPP4R2Q9NY27 417 aa9.74□□□□□ -0.85
HIPK1-211ENST00000626993 U2AF1L5P0DN76 240 aaPredicted RBP9.74□□□□□ -0.85
HIPK1-211ENST00000626993 U2AF1Q01081 240 aaKnown RBP eCLIP9.74□□□□□ -0.85
HIPK1-211ENST00000626993 SUPT16HQ9Y5B9 1047 aaKnown RBP9.74□□□□□ -0.85
HIPK1-211ENST00000626993 KDM6BO15054 1643 aa9.73□□□□□ -0.85
HIPK1-211ENST00000626993 IDI1Q13907 227 aa9.73□□□□□ -0.85
HIPK1-211ENST00000626993 TMEM132EQ6IEE7 984 aa9.73□□□□□ -0.85
HIPK1-211ENST00000626993 ANKLE2Q86XL3 938 aa9.72□□□□□ -0.85
HIPK1-211ENST00000626993 PUS7Q96PZ0 661 aaKnown RBP9.72□□□□□ -0.85
HIPK1-211ENST00000626993 GOLGA2Q08379 1002 aa9.72□□□□□ -0.85
HIPK1-211ENST00000626993 PRAM1Q96QH2 718 aa9.72□□□□□ -0.85
HIPK1-211ENST00000626993 ADGRF5Q8IZF2 1346 aa9.71□□□□□ -0.85
HIPK1-211ENST00000626993 GPRASP1Q5JY77 1395 aa9.71□□□□□ -0.85
HIPK1-211ENST00000626993 NSD2O96028 1365 aa9.71□□□□□ -0.85
HIPK1-211ENST00000626993 ZNF692Q9BU19 519 aaPredicted RBP9.71□□□□□ -0.86
HIPK1-211ENST00000626993 GLI2P10070 1586 aa9.71□□□□□ -0.86
HIPK1-211ENST00000626993 ZBTB7CA1YPR0 619 aa9.71□□□□□ -0.86
HIPK1-211ENST00000626993 NEUROD2Q15784 382 aa9.71□□□□□ -0.86
HIPK1-211ENST00000626993 LMOD2Q6P5Q4 547 aa9.7□□□□□ -0.86
HIPK1-211ENST00000626993 FTSJ3Q8IY81 847 aaKnown RBP9.7□□□□□ -0.86
HIPK1-211ENST00000626993 PTPRTO14522 1441 aa9.7□□□□□ -0.86
HIPK1-211ENST00000626993 ANP32AP39687 249 aaKnown RBP9.7□□□□□ -0.86
HIPK1-211ENST00000626993 EIF5BO60841 1220 aaKnown RBP9.7□□□□□ -0.86
HIPK1-211ENST00000626993 RIMBP3CA6NJZ7 1639 aa9.7□□□□□ -0.86
HIPK1-211ENST00000626993 RIMBP3BA6NNM3 1639 aa9.7□□□□□ -0.86
HIPK1-211ENST00000626993 RIMBP3Q9UFD9 1639 aa9.7□□□□□ -0.86
HIPK1-211ENST00000626993 INO80Q9ULG1 1556 aaPredicted RBP9.7□□□□□ -0.86
HIPK1-211ENST00000626993 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.69□□□□□ -0.86
HIPK1-211ENST00000626993 MYOM2P54296 1465 aa9.69□□□□□ -0.86
HIPK1-211ENST00000626993 UPF2Q9HAU5 1272 aaKnown RBP9.69□□□□□ -0.86
HIPK1-211ENST00000626993 RTF1Q92541 710 aaKnown RBP9.69□□□□□ -0.86
HIPK1-211ENST00000626993 RCAN3Q9UKA8 241 aa9.69□□□□□ -0.86
HIPK1-211ENST00000626993 EFCAB6Q5THR3 1501 aa9.69□□□□□ -0.86
HIPK1-211ENST00000626993 PAK3O75914 559 aaPredicted RBP9.69□□□□□ -0.86
HIPK1-211ENST00000626993 RIMS2Q9UQ26 1411 aa9.69□□□□□ -0.86
HIPK1-211ENST00000626993 PRDM15P57071 1507 aaPredicted RBP9.69□□□□□ -0.86
HIPK1-211ENST00000626993 KIF1BO60333 1816 aa9.69□□□□□ -0.86
HIPK1-211ENST00000626993 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
HIPK1-211ENST00000626993 IPO8O15397 1037 aaKnown RBP9.68□□□□□ -0.86
HIPK1-211ENST00000626993 NPATQ14207 1427 aa9.68□□□□□ -0.86
HIPK1-211ENST00000626993 E9PSI1 815 aa9.68□□□□□ -0.86
HIPK1-211ENST00000626993 FBXO31Q5XUX0 539 aaPredicted RBP9.68□□□□□ -0.86
HIPK1-211ENST00000626993 ARHGAP31Q2M1Z3 1444 aa9.67□□□□□ -0.86
HIPK1-211ENST00000626993 PPP2R1AP30153 589 aa9.67□□□□□ -0.86
HIPK1-211ENST00000626993 CDK19Q9BWU1 502 aa9.67□□□□□ -0.86
HIPK1-211ENST00000626993 LMTK2Q8IWU2 1503 aa9.67□□□□□ -0.86
HIPK1-211ENST00000626993 DIAPH1O60610 1272 aaKnown RBP9.67□□□□□ -0.86
HIPK1-211ENST00000626993 ZMYM3Q14202 1370 aa9.67□□□□□ -0.86
HIPK1-211ENST00000626993 AMPHP49418 695 aa9.66□□□□□ -0.86
HIPK1-211ENST00000626993 COL17A1Q9UMD9 1497 aaPredicted RBP9.66□□□□□ -0.86
HIPK1-211ENST00000626993 ABCC3O15438 1527 aa9.66□□□□□ -0.86
HIPK1-211ENST00000626993 RUNDC1Q96C34 613 aa9.66□□□□□ -0.86
HIPK1-211ENST00000626993 SPATA31E1Q6ZUB1 1445 aa9.65□□□□□ -0.86
HIPK1-211ENST00000626993 YEATS2Q9ULM3 1422 aa9.65□□□□□ -0.86
HIPK1-211ENST00000626993 SPHKAPQ2M3C7 1700 aa9.64□□□□□ -0.87
HIPK1-211ENST00000626993 KDM5CP41229 1560 aa9.64□□□□□ -0.87
HIPK1-211ENST00000626993 NSD3Q9BZ95 1437 aa9.64□□□□□ -0.87
HIPK1-211ENST00000626993 TSPOAP1O95153 1857 aa9.64□□□□□ -0.87
HIPK1-211ENST00000626993 IRX6P78412 446 aaPredicted RBP9.64□□□□□ -0.87
HIPK1-211ENST00000626993 LAS1LQ9Y4W2 734 aaKnown RBP9.64□□□□□ -0.87
HIPK1-211ENST00000626993 DISP3Q9P2K9 1392 aa9.64□□□□□ -0.87
HIPK1-211ENST00000626993 ZC3H13Q5T200 1668 aaKnown RBP9.64□□□□□ -0.87
HIPK1-211ENST00000626993 NPM2Q86SE8 214 aaKnown RBP9.63□□□□□ -0.87
HIPK1-211ENST00000626993 ATF3P18847 181 aa9.63□□□□□ -0.87
HIPK1-211ENST00000626993 ASXL1Q8IXJ9 1541 aa9.63□□□□□ -0.87
HIPK1-211ENST00000626993 CCDC61Q9Y6R9 512 aa9.62□□□□□ -0.87
HIPK1-211ENST00000626993 SBNO2Q9Y2G9 1366 aa9.62□□□□□ -0.87
HIPK1-211ENST00000626993 SLC12A5Q9H2X9 1139 aa9.62□□□□□ -0.87
HIPK1-211ENST00000626993 C11orf95C9JLR9 678 aaPredicted RBP9.62□□□□□ -0.87
HIPK1-211ENST00000626993 SOX12O15370 315 aa9.62□□□□□ -0.87
HIPK1-211ENST00000626993 PNISRQ8TF01 805 aaKnown RBP9.62□□□□□ -0.87
HIPK1-211ENST00000626993 PSME1Q06323 249 aa9.62□□□□□ -0.87
HIPK1-211ENST00000626993 FRAT1Q92837 279 aaPredicted RBP9.61□□□□□ -0.87
HIPK1-211ENST00000626993 RTL5Q5HYW3 569 aaPredicted RBP9.61□□□□□ -0.87
HIPK1-211ENST00000626993 CABP1Q9NZU7 370 aa9.61□□□□□ -0.87
HIPK1-211ENST00000626993 CCDC146Q8IYE0 955 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms