RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 TEX14Q8IWB6 1497 aa8.16□□□□□ -1.1
RPRD1B-209ENST00000622494 UPF1Q92900 1129 aaKnown RBP eCLIP8.16□□□□□ -1.1
RPRD1B-209ENST00000622494 HECW1Q76N89 1606 aa8.15□□□□□ -1.1
RPRD1B-209ENST00000622494 TBC1D12O60347 775 aa8.15□□□□□ -1.1
RPRD1B-209ENST00000622494 SPDYE16A6NNV3 312 aaPredicted RBP8.14□□□□□ -1.11
RPRD1B-209ENST00000622494 HOXB1P14653 301 aaPredicted RBP8.14□□□□□ -1.11
RPRD1B-209ENST00000622494 MAP3K9P80192 1104 aa8.14□□□□□ -1.11
RPRD1B-209ENST00000622494 ANO8Q9HCE9 1232 aaPredicted RBP8.14□□□□□ -1.11
RPRD1B-209ENST00000622494 RICTORQ6R327 1708 aa8.14□□□□□ -1.11
RPRD1B-209ENST00000622494 LOC105371045A0A1W2PR82 267 aa8.13□□□□□ -1.11
RPRD1B-209ENST00000622494 ARSIQ5FYB1 569 aa8.13□□□□□ -1.11
RPRD1B-209ENST00000622494 LCE2DQ5TA82 110 aaPredicted RBP8.13□□□□□ -1.11
RPRD1B-209ENST00000622494 ZNF710Q8N1W2 664 aa8.13□□□□□ -1.11
RPRD1B-209ENST00000622494 ST18O60284 1047 aa8.12□□□□□ -1.11
RPRD1B-209ENST00000622494 EVI5O60447 810 aa8.12□□□□□ -1.11
RPRD1B-209ENST00000622494 KHSRPQ92945 711 aaKnown RBP eCLIP8.12□□□□□ -1.11
RPRD1B-209ENST00000622494 PTGER2P43116 358 aa8.11□□□□□ -1.11
RPRD1B-209ENST00000622494 ARAP3Q8WWN8 1544 aa8.11□□□□□ -1.11
RPRD1B-209ENST00000622494 MYO5CQ9NQX4 1742 aa8.11□□□□□ -1.11
RPRD1B-209ENST00000622494 CLIP1P30622 1438 aa8.11□□□□□ -1.11
RPRD1B-209ENST00000622494 CDC42BPBQ9Y5S2 1711 aa8.1□□□□□ -1.11
RPRD1B-209ENST00000622494 FANCAO15360 1455 aa8.1□□□□□ -1.11
RPRD1B-209ENST00000622494 YEATS2Q9ULM3 1422 aa8.1□□□□□ -1.11
RPRD1B-209ENST00000622494 PLEKHD1A6NEE1 506 aa8.09□□□□□ -1.11
RPRD1B-209ENST00000622494 NUDT7P0C024 238 aa8.09□□□□□ -1.11
RPRD1B-209ENST00000622494 FMN1Q68DA7 1419 aa8.09□□□□□ -1.11
RPRD1B-209ENST00000622494 AKNAQ7Z591 1439 aa8.09□□□□□ -1.11
RPRD1B-209ENST00000622494 CDC42BPAQ5VT25 1732 aa8.09□□□□□ -1.11
RPRD1B-209ENST00000622494 NEO1Q92859 1461 aa8.08□□□□□ -1.12
RPRD1B-209ENST00000622494 MADDQ8WXG6 1647 aa8.08□□□□□ -1.12
RPRD1B-209ENST00000622494 TESPA1A2RU30 521 aaPredicted RBP8.08□□□□□ -1.12
RPRD1B-209ENST00000622494 CASKIN1Q8WXD9 1431 aa8.08□□□□□ -1.12
RPRD1B-209ENST00000622494 ARHGEF40Q8TER5 1519 aa8.08□□□□□ -1.12
RPRD1B-209ENST00000622494 TROQ12816 1431 aaPredicted RBP8.07□□□□□ -1.12
RPRD1B-209ENST00000622494 SEMA3EO15041 775 aa8.07□□□□□ -1.12
RPRD1B-209ENST00000622494 ADAMTSL3P82987 1691 aa8.07□□□□□ -1.12
RPRD1B-209ENST00000622494 RIMS1Q86UR5 1692 aaKnown RBP8.07□□□□□ -1.12
RPRD1B-209ENST00000622494 ARHGEF12Q9NZN5 1544 aa8.07□□□□□ -1.12
RPRD1B-209ENST00000622494 BCORL1Q5H9F3 1711 aa8.06□□□□□ -1.12
RPRD1B-209ENST00000622494 HECW2Q9P2P5 1572 aa8.06□□□□□ -1.12
RPRD1B-209ENST00000622494 CEP162Q5TB80 1403 aa8.06□□□□□ -1.12
RPRD1B-209ENST00000622494 NBR1Q14596 966 aa8.06□□□□□ -1.12
RPRD1B-209ENST00000622494 FAM163AQ96GL9 167 aaPredicted RBP8.06□□□□□ -1.12
RPRD1B-209ENST00000622494 BCANQ96GW7 911 aa8.06□□□□□ -1.12
RPRD1B-209ENST00000622494 ARHGAP5Q13017 1502 aa8.06□□□□□ -1.12
RPRD1B-209ENST00000622494 PREX2Q70Z35 1606 aa8.06□□□□□ -1.12
RPRD1B-209ENST00000622494 SCAPERQ9BY12 1400 aa8.05□□□□□ -1.12
RPRD1B-209ENST00000622494 ZNF316A6NFI3 1004 aaPredicted RBP8.05□□□□□ -1.12
RPRD1B-209ENST00000622494 LHX6Q9UPM6 363 aa8.05□□□□□ -1.12
RPRD1B-209ENST00000622494 DENND4BO75064 1496 aaPredicted RBP8.05□□□□□ -1.12
RPRD1B-209ENST00000622494 FYCO1Q9BQS8 1478 aa8.05□□□□□ -1.12
RPRD1B-209ENST00000622494 CFAP74Q9C0B2 1584 aa8.05□□□□□ -1.12
RPRD1B-209ENST00000622494 ITSN2Q9NZM3 1697 aa8.05□□□□□ -1.12
RPRD1B-209ENST00000622494 PLCH2O75038 1416 aa8.04□□□□□ -1.12
RPRD1B-209ENST00000622494 POGZQ7Z3K3 1410 aa8.04□□□□□ -1.12
RPRD1B-209ENST00000622494 MLLT3P42568 568 aaPredicted RBP8.04□□□□□ -1.12
RPRD1B-209ENST00000622494 SAMD9LQ8IVG5 1584 aa8.04□□□□□ -1.12
RPRD1B-209ENST00000622494 ZMYM4Q5VZL5 1548 aa8.03□□□□□ -1.12
RPRD1B-209ENST00000622494 ZFYVE16Q7Z3T8 1539 aa8.03□□□□□ -1.12
RPRD1B-209ENST00000622494 ABCA6Q8N139 1617 aa8.03□□□□□ -1.12
RPRD1B-209ENST00000622494 MLECQ14165 292 aa8.03□□□□□ -1.12
RPRD1B-209ENST00000622494 TRAPPC8Q9Y2L5 1435 aa8.03□□□□□ -1.12
RPRD1B-209ENST00000622494 PHF14O94880 888 aa8.02□□□□□ -1.13
RPRD1B-209ENST00000622494 FOSBP53539 338 aa8.02□□□□□ -1.13
RPRD1B-209ENST00000622494 AFAP1Q8N556 730 aa8.02□□□□□ -1.13
RPRD1B-209ENST00000622494 ABCC1P33527 1531 aa8.02□□□□□ -1.13
RPRD1B-209ENST00000622494 ARID4BQ4LE39 1312 aaPredicted RBP8.02□□□□□ -1.13
RPRD1B-209ENST00000622494 DIP2CQ9Y2E4 1556 aa8.01□□□□□ -1.13
RPRD1B-209ENST00000622494 PSDA5PKW4 1024 aaPredicted RBP8.01□□□□□ -1.13
RPRD1B-209ENST00000622494 PCDHGA10Q9Y5H3 936 aa8.01□□□□□ -1.13
RPRD1B-209ENST00000622494 TIAM1Q13009 1591 aa8.01□□□□□ -1.13
RPRD1B-209ENST00000622494 PTPRMP28827 1452 aa8□□□□□ -1.13
RPRD1B-209ENST00000622494 CCDC18Q5T9S5 1454 aa8□□□□□ -1.13
RPRD1B-209ENST00000622494 FER1L4A9Z1Z3 1794 aa8□□□□□ -1.13
RPRD1B-209ENST00000622494 SYCP2Q9BX26 1530 aa8□□□□□ -1.13
RPRD1B-209ENST00000622494 GPATCH8Q9UKJ3 1502 aaKnown RBP8□□□□□ -1.13
RPRD1B-209ENST00000622494 OSBPP22059 807 aa8□□□□□ -1.13
RPRD1B-209ENST00000622494 EMP3P54852 163 aa8□□□□□ -1.13
RPRD1B-209ENST00000622494 DDX12PQ92771 950 aa8□□□□□ -1.13
RPRD1B-209ENST00000622494 MARVELD3Q96A59 401 aa8□□□□□ -1.13
RPRD1B-209ENST00000622494 EPAS1Q99814 870 aa8□□□□□ -1.13
RPRD1B-209ENST00000622494 ZNF777Q9ULD5 760 aaPredicted RBP8□□□□□ -1.13
RPRD1B-209ENST00000622494 ZNF644Q9H582 1327 aaPredicted RBP8□□□□□ -1.13
RPRD1B-209ENST00000622494 KIDINS220Q9ULH0 1771 aa7.99□□□□□ -1.13
RPRD1B-209ENST00000622494 KDM5CP41229 1560 aa7.99□□□□□ -1.13
RPRD1B-209ENST00000622494 POTEB3A0JP26 581 aa7.98□□□□□ -1.13
RPRD1B-209ENST00000622494 PRIM1P49642 420 aaKnown RBP7.98□□□□□ -1.13
RPRD1B-209ENST00000622494 EFCAB2Q5VUJ9 269 aa7.98□□□□□ -1.13
RPRD1B-209ENST00000622494 SMYD5Q6GMV2 418 aa7.98□□□□□ -1.13
RPRD1B-209ENST00000622494 POTEBQ6S5H4 581 aa7.98□□□□□ -1.13
RPRD1B-209ENST00000622494 PHLDB1Q86UU1 1377 aa7.97□□□□□ -1.13
RPRD1B-209ENST00000622494 GRXCR2A6NFK2 248 aa7.97□□□□□ -1.13
RPRD1B-209ENST00000622494 CEBPAP49715 358 aaPredicted RBP7.97□□□□□ -1.13
RPRD1B-209ENST00000622494 HNRNPMP52272 730 aaKnown RBP eCLIP7.97□□□□□ -1.132e-8■□□□□ 9.4
RPRD1B-209ENST00000622494 TYW1BQ6NUM6 668 aa7.97□□□□□ -1.13
RPRD1B-209ENST00000622494 ZNF454Q8N9F8 522 aa7.97□□□□□ -1.13
RPRD1B-209ENST00000622494 FBXW7Q969H0 707 aa7.97□□□□□ -1.13
RPRD1B-209ENST00000622494 SUPT6HQ7KZ85 1726 aaKnown RBP7.97□□□□□ -1.13
RPRD1B-209ENST00000622494 ERBB3P21860 1342 aa7.97□□□□□ -1.13
RPRD1B-209ENST00000622494 HSPA2P54652 639 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms