RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.18■■□□□ 1.94
CIRBP-245ENST00000621399 NPHP4O75161 1426 aaPredicted RBP27.16■■□□□ 1.94
CIRBP-245ENST00000621399 NUTM2DQ5VT03 806 aaPredicted RBP27.16■■□□□ 1.94
CIRBP-245ENST00000621399 MYO5BQ9ULV0 1848 aa27.16■■□□□ 1.94
CIRBP-245ENST00000621399 ZFYVE9O95405 1425 aa27.16■■□□□ 1.94
CIRBP-245ENST00000621399 MED14O60244 1454 aa27.15■■□□□ 1.94
CIRBP-245ENST00000621399 DHX57Q6P158 1386 aaKnown RBP27.15■■□□□ 1.94
CIRBP-245ENST00000621399 NEURL4Q96JN8 1562 aa27.14■■□□□ 1.94
CIRBP-245ENST00000621399 KIF1BO60333 1816 aa27.14■■□□□ 1.94
CIRBP-245ENST00000621399 POLR1AO95602 1720 aaPredicted RBP27.14■■□□□ 1.94
CIRBP-245ENST00000621399 RGL3Q3MIN7 710 aa27.14■■□□□ 1.94
CIRBP-245ENST00000621399 BCANQ96GW7 911 aa27.13■■□□□ 1.93
CIRBP-245ENST00000621399 RPGRIP1LQ68CZ1 1315 aa27.11■■□□□ 1.93
CIRBP-245ENST00000621399 SPATA31E1Q6ZUB1 1445 aa27.1■■□□□ 1.93
CIRBP-245ENST00000621399 SENP3Q9H4L4 574 aaPredicted RBP27.1■■□□□ 1.93
CIRBP-245ENST00000621399 PLEKHG1Q9ULL1 1385 aa27.07■■□□□ 1.92
CIRBP-245ENST00000621399 IQGAP1P46940 1657 aa27.05■■□□□ 1.92
CIRBP-245ENST00000621399 NEXMIFQ5QGS0 1516 aa27.05■■□□□ 1.92
CIRBP-245ENST00000621399 VGFO15240 615 aaPredicted RBP27.04■■□□□ 1.92
CIRBP-245ENST00000621399 SLC26A8Q96RN1 970 aa27.04■■□□□ 1.92
CIRBP-245ENST00000621399 SIN3AQ96ST3 1273 aa27■■□□□ 1.91
CIRBP-245ENST00000621399 ZNF335Q9H4Z2 1342 aaPredicted RBP26.99■■□□□ 1.91
CIRBP-245ENST00000621399 NEUROD1Q13562 356 aa26.98■■□□□ 1.91
CIRBP-245ENST00000621399 TBX22Q9Y458 520 aa26.96■■□□□ 1.91
CIRBP-245ENST00000621399 ADGRF5Q8IZF2 1346 aa26.94■■□□□ 1.9
CIRBP-245ENST00000621399 ADAMTS13Q76LX8 1427 aa26.93■■□□□ 1.9
CIRBP-245ENST00000621399 DCAF11Q8TEB1 546 aa26.93■■□□□ 1.9
CIRBP-245ENST00000621399 PPLO60437 1756 aa26.93■■□□□ 1.9
CIRBP-245ENST00000621399 CERKQ8TCT0 537 aa26.92■■□□□ 1.9
CIRBP-245ENST00000621399 KDM2AQ9Y2K7 1162 aa26.91■■□□□ 1.9
CIRBP-245ENST00000621399 SETBP1Q9Y6X0 1596 aa26.9■■□□□ 1.9
CIRBP-245ENST00000621399 KCNA6P17658 529 aa26.87■■□□□ 1.89
CIRBP-245ENST00000621399 STAC3Q96MF2 364 aa26.87■■□□□ 1.89
CIRBP-245ENST00000621399 IFT172Q9UG01 1749 aa26.87■■□□□ 1.89
CIRBP-245ENST00000621399 DIP2AQ14689 1571 aa26.86■■□□□ 1.89
CIRBP-245ENST00000621399 CCER1Q8TC90 406 aaPredicted RBP26.86■■□□□ 1.89
CIRBP-245ENST00000621399 LTBP4Q8N2S1 1624 aa26.86■■□□□ 1.89
CIRBP-245ENST00000621399 MYOM2P54296 1465 aa26.86■■□□□ 1.89
CIRBP-245ENST00000621399 NRXN3Q9Y4C0 1643 aa26.85■■□□□ 1.89
CIRBP-245ENST00000621399 L3MBTL2Q969R5 705 aa26.83■■□□□ 1.89
CIRBP-245ENST00000621399 METP08581 1390 aa26.83■■□□□ 1.88
CIRBP-245ENST00000621399 PIK3R4Q99570 1358 aa26.83■■□□□ 1.88
CIRBP-245ENST00000621399 PIK3C2GO75747 1445 aa26.82■■□□□ 1.88
CIRBP-245ENST00000621399 NRXN1Q9ULB1 1477 aa26.81■■□□□ 1.88
CIRBP-245ENST00000621399 CPS1P31327 1500 aa26.8■■□□□ 1.88
CIRBP-245ENST00000621399 ALKQ9UM73 1620 aa26.8■■□□□ 1.88
CIRBP-245ENST00000621399 CLSPNQ9HAW4 1339 aa26.8■■□□□ 1.88
CIRBP-245ENST00000621399 AMOTL2Q9Y2J4 779 aa26.79■■□□□ 1.88
CIRBP-245ENST00000621399 C14orf93Q9H972 538 aaKnown RBP26.78■■□□□ 1.88
CIRBP-245ENST00000621399 TONSLQ96HA7 1378 aa26.77■■□□□ 1.88
CIRBP-245ENST00000621399 CFAP70Q5T0N1 1121 aa26.77■■□□□ 1.88
CIRBP-245ENST00000621399 PTPRUQ92729 1446 aa26.75■■□□□ 1.87
CIRBP-245ENST00000621399 PROSER2Q86WR7 435 aaPredicted RBP26.75■■□□□ 1.87
CIRBP-245ENST00000621399 STRCP1A6NGW2 1772 aa26.75■■□□□ 1.87
CIRBP-245ENST00000621399 NWD1Q149M9 1564 aa26.73■■□□□ 1.87
CIRBP-245ENST00000621399 TMEM132EQ6IEE7 984 aa26.73■■□□□ 1.87
CIRBP-245ENST00000621399 LRRC7Q96NW7 1537 aa26.72■■□□□ 1.87
CIRBP-245ENST00000621399 CHD2O14647 1828 aaKnown RBP26.72■■□□□ 1.87
CIRBP-245ENST00000621399 NKTRP30414 1462 aaKnown RBP26.71■■□□□ 1.87
CIRBP-245ENST00000621399 RBM33Q96EV2 1170 aaKnown RBP26.7■■□□□ 1.86
CIRBP-245ENST00000621399 SETD1AO15047 1707 aaKnown RBP26.69■■□□□ 1.86
CIRBP-245ENST00000621399 PRAG1Q86YV5 1406 aa26.68■■□□□ 1.86
CIRBP-245ENST00000621399 STK26Q9P289 416 aa26.68■■□□□ 1.86
CIRBP-245ENST00000621399 TMEM94Q12767 1356 aa26.68■■□□□ 1.86
CIRBP-245ENST00000621399 IQSEC2Q5JU85 1478 aa26.66■■□□□ 1.86
CIRBP-245ENST00000621399 LAMC1P11047 1609 aa26.65■■□□□ 1.86
CIRBP-245ENST00000621399 LRPPRCP42704 1394 aaKnown RBP26.65■■□□□ 1.86
CIRBP-245ENST00000621399 XRN1Q8IZH2 1706 aaKnown RBP26.64■■□□□ 1.85
CIRBP-245ENST00000621399 ASXL1Q8IXJ9 1541 aa26.64■■□□□ 1.85
CIRBP-245ENST00000621399 C14orf37Q86TY3 774 aa26.63■■□□□ 1.85
CIRBP-245ENST00000621399 YTHDC2Q9H6S0 1430 aaKnown RBP26.63■■□□□ 1.85
CIRBP-245ENST00000621399 ABCC11Q96J66 1382 aa26.61■■□□□ 1.85
CIRBP-245ENST00000621399 TIMELESSQ9UNS1 1208 aa26.61■■□□□ 1.85
CIRBP-245ENST00000621399 ROBO2Q9HCK4 1378 aa26.6■■□□□ 1.85
CIRBP-245ENST00000621399 PTCH1Q13635 1447 aa26.59■■□□□ 1.85
CIRBP-245ENST00000621399 ADGRB1O14514 1584 aa26.58■■□□□ 1.85
CIRBP-245ENST00000621399 NCOA3Q9Y6Q9 1424 aa26.58■■□□□ 1.85
CIRBP-245ENST00000621399 NBPF1Q3BBV0 1214 aa26.58■■□□□ 1.85
CIRBP-245ENST00000621399 NBPF8Q3BBV2 869 aa26.58■■□□□ 1.85
CIRBP-245ENST00000621399 UBAP1LF5GYI3 381 aa26.57■■□□□ 1.84
CIRBP-245ENST00000621399 TECPR2O15040 1411 aa26.56■■□□□ 1.84
CIRBP-245ENST00000621399 TRAK1Q9UPV9 953 aa26.56■■□□□ 1.84
CIRBP-245ENST00000621399 MSH6P52701 1360 aa26.56■■□□□ 1.84
CIRBP-245ENST00000621399 TOM1O60784 492 aa26.54■■□□□ 1.84
CIRBP-245ENST00000621399 WAPLQ7Z5K2 1190 aa26.54■■□□□ 1.84
CIRBP-245ENST00000621399 SIRT1Q96EB6 747 aa26.54■■□□□ 1.84
CIRBP-245ENST00000621399 C19orf44Q9H6X5 657 aa26.54■■□□□ 1.84
CIRBP-245ENST00000621399 KIAA1210Q9ULL0 1709 aa26.53■■□□□ 1.84
CIRBP-245ENST00000621399 XIRP1Q702N8 1843 aaKnown RBP26.53■■□□□ 1.84
CIRBP-245ENST00000621399 ROCK2O75116 1388 aaKnown RBP26.5■■□□□ 1.83
CIRBP-245ENST00000621399 PRAM1Q96QH2 718 aa26.5■■□□□ 1.83
CIRBP-245ENST00000621399 POGKQ9P215 609 aa26.5■■□□□ 1.83
CIRBP-245ENST00000621399 FAM135BQ49AJ0 1406 aa26.49■■□□□ 1.83
CIRBP-245ENST00000621399 DISP3Q9P2K9 1392 aa26.49■■□□□ 1.83
CIRBP-245ENST00000621399 KNDC1Q76NI1 1749 aa26.48■■□□□ 1.83
CIRBP-245ENST00000621399 PLEKHH1Q9ULM0 1364 aa26.48■■□□□ 1.83
CIRBP-245ENST00000621399 ATF3P18847 181 aa26.48■■□□□ 1.83
CIRBP-245ENST00000621399 ILDR2Q71H61 639 aa26.47■■□□□ 1.83
CIRBP-245ENST00000621399 DLC1Q96QB1 1528 aa26.47■■□□□ 1.83
CIRBP-245ENST00000621399 ADGRL3Q9HAR2 1447 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms