RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 GOLGA6L3A6NEY3 463 aa18.77■□□□□ 0.6
SYNRG-225ENST00000619541 ROCK2O75116 1388 aaKnown RBP18.76■□□□□ 0.59
SYNRG-225ENST00000619541 PANK2Q9BZ23 570 aa18.76■□□□□ 0.59
SYNRG-225ENST00000619541 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.76■□□□□ 0.59
SYNRG-225ENST00000619541 NPM1P06748 294 aaKnown RBP eCLIP18.75■□□□□ 0.59
SYNRG-225ENST00000619541 FANCAO15360 1455 aa18.75■□□□□ 0.59
SYNRG-225ENST00000619541 PLA2R1Q13018 1463 aa18.74■□□□□ 0.59
SYNRG-225ENST00000619541 PLXNC1O60486 1568 aa18.74■□□□□ 0.59
SYNRG-225ENST00000619541 DUOX2Q9NRD8 1548 aa18.73■□□□□ 0.59
SYNRG-225ENST00000619541 CANXP27824 592 aaKnown RBP18.72■□□□□ 0.59
SYNRG-225ENST00000619541 KDM2BQ8NHM5 1336 aa18.72■□□□□ 0.59
SYNRG-225ENST00000619541 XRCC6P12956 609 aaKnown RBP eCLIP18.71■□□□□ 0.59
SYNRG-225ENST00000619541 SEC24BO95487 1268 aa18.71■□□□□ 0.59
SYNRG-225ENST00000619541 WDR43Q15061 677 aaKnown RBP eCLIP18.71■□□□□ 0.59
SYNRG-225ENST00000619541 CCDC144AA2RUR9 1427 aa18.71■□□□□ 0.59
SYNRG-225ENST00000619541 SCAPERQ9BY12 1400 aa18.71■□□□□ 0.59
SYNRG-225ENST00000619541 UNC13BO14795 1591 aa18.7■□□□□ 0.58
SYNRG-225ENST00000619541 ERBINQ96RT1 1412 aa18.69■□□□□ 0.58
SYNRG-225ENST00000619541 UPF2Q9HAU5 1272 aaKnown RBP18.69■□□□□ 0.58
SYNRG-225ENST00000619541 ADAMTS8Q9UP79 889 aa18.69■□□□□ 0.58
SYNRG-225ENST00000619541 ADGRL1O94910 1474 aa18.67■□□□□ 0.58
SYNRG-225ENST00000619541 ABCA9Q8IUA7 1624 aa18.67■□□□□ 0.58
SYNRG-225ENST00000619541 ARAP3Q8WWN8 1544 aa18.67■□□□□ 0.58
SYNRG-225ENST00000619541 UHRF1BP1Q6BDS2 1440 aa18.67■□□□□ 0.58
SYNRG-225ENST00000619541 BCORL1Q5H9F3 1711 aa18.66■□□□□ 0.58
SYNRG-225ENST00000619541 ZFYVE16Q7Z3T8 1539 aa18.65■□□□□ 0.58
SYNRG-225ENST00000619541 RRP9O43818 475 aaKnown RBP18.65■□□□□ 0.58
SYNRG-225ENST00000619541 TRIM44Q96DX7 344 aaPredicted RBP18.65■□□□□ 0.58
SYNRG-225ENST00000619541 KIF3BO15066 747 aa18.65■□□□□ 0.58
SYNRG-225ENST00000619541 RTEL1-TNFRSF6BF6WH68 1400 aa18.65■□□□□ 0.58
SYNRG-225ENST00000619541 CCDC146Q8IYE0 955 aa18.64■□□□□ 0.58
SYNRG-225ENST00000619541 PANK3Q9H999 370 aa18.64■□□□□ 0.57
SYNRG-225ENST00000619541 IQGAP3Q86VI3 1631 aa18.64■□□□□ 0.57
SYNRG-225ENST00000619541 GOLGA2Q08379 1002 aa18.63■□□□□ 0.57
SYNRG-225ENST00000619541 NBPF1Q3BBV0 1214 aa18.63■□□□□ 0.57
SYNRG-225ENST00000619541 BCAR3O75815 825 aa18.63■□□□□ 0.57
SYNRG-225ENST00000619541 MAGI2Q86UL8 1455 aa18.62■□□□□ 0.57
SYNRG-225ENST00000619541 MYH16Q9H6N6 1097 aa18.62■□□□□ 0.57
SYNRG-225ENST00000619541 RALGAPBQ86X10 1494 aa18.62■□□□□ 0.57
SYNRG-225ENST00000619541 IGHDP01880 384 aa18.61■□□□□ 0.57
SYNRG-225ENST00000619541 CLCN1P35523 988 aa18.61■□□□□ 0.57
SYNRG-225ENST00000619541 CYB5RLQ6IPT4 315 aa18.61■□□□□ 0.57
SYNRG-225ENST00000619541 ATP7AQ04656 1500 aa18.6■□□□□ 0.57
SYNRG-225ENST00000619541 CD109Q6YHK3 1445 aa18.6■□□□□ 0.57
SYNRG-225ENST00000619541 ARID3AQ99856 593 aa18.59■□□□□ 0.57
SYNRG-225ENST00000619541 DUSP27Q5VZP5 1158 aa18.59■□□□□ 0.57
SYNRG-225ENST00000619541 KDM5CP41229 1560 aa18.59■□□□□ 0.57
SYNRG-225ENST00000619541 A2MP01023 1474 aa18.59■□□□□ 0.57
SYNRG-225ENST00000619541 COG6Q9Y2V7 657 aa18.59■□□□□ 0.57
SYNRG-225ENST00000619541 PRAG1Q86YV5 1406 aa18.58■□□□□ 0.56
SYNRG-225ENST00000619541 TRAK2O60296 914 aa18.57■□□□□ 0.56
SYNRG-225ENST00000619541 MCM4P33991 863 aa18.56■□□□□ 0.56
SYNRG-225ENST00000619541 TBC1D2Q9BYX2 928 aa18.56■□□□□ 0.56
SYNRG-225ENST00000619541 USP19O94966 1318 aa18.56■□□□□ 0.56
SYNRG-225ENST00000619541 PANK1Q8TE04 598 aa18.56■□□□□ 0.56
SYNRG-225ENST00000619541 INO80Q9ULG1 1556 aaPredicted RBP18.55■□□□□ 0.56
SYNRG-225ENST00000619541 ESPNB1AK53 854 aa18.55■□□□□ 0.56
SYNRG-225ENST00000619541 PODXL2Q9NZ53 605 aa18.55■□□□□ 0.56
SYNRG-225ENST00000619541 ATP10AO60312 1499 aa18.54■□□□□ 0.56
SYNRG-225ENST00000619541 RAPGEF3O95398 923 aa18.54■□□□□ 0.56
SYNRG-225ENST00000619541 PARD3Q8TEW0 1356 aa18.53■□□□□ 0.56
SYNRG-225ENST00000619541 NEUROD2Q15784 382 aa18.52■□□□□ 0.56
SYNRG-225ENST00000619541 PLEKHH1Q9ULM0 1364 aa18.52■□□□□ 0.55
SYNRG-225ENST00000619541 PER1O15534 1290 aaPredicted RBP18.52■□□□□ 0.55
SYNRG-225ENST00000619541 MRE11P49959 708 aa18.52■□□□□ 0.55
SYNRG-225ENST00000619541 E9PCH4 1651 aa18.51■□□□□ 0.55
SYNRG-225ENST00000619541 KNSTRNQ9Y448 316 aa18.51■□□□□ 0.55
SYNRG-225ENST00000619541 APAF1O14727 1248 aa18.51■□□□□ 0.55
SYNRG-225ENST00000619541 MFAP1P55081 439 aaKnown RBP18.51■□□□□ 0.55
SYNRG-225ENST00000619541 KANK1Q14678 1352 aa18.51■□□□□ 0.55
SYNRG-225ENST00000619541 GRPEL1Q9HAV7 217 aa18.51■□□□□ 0.55
SYNRG-225ENST00000619541 RBM10P98175 930 aaKnown RBP18.5■□□□□ 0.55
SYNRG-225ENST00000619541 ZNF518AQ6AHZ1 1483 aa18.5■□□□□ 0.55
SYNRG-225ENST00000619541 PLEKHG5O94827 1062 aa18.49■□□□□ 0.55
SYNRG-225ENST00000619541 MAPK8IP3Q9UPT6 1336 aa18.49■□□□□ 0.55
SYNRG-225ENST00000619541 KIDINS220Q9ULH0 1771 aa18.49■□□□□ 0.55
SYNRG-225ENST00000619541 ANTXR1Q9H6X2 564 aa18.49■□□□□ 0.55
SYNRG-225ENST00000619541 GGT6Q6P531 493 aa18.48■□□□□ 0.55
SYNRG-225ENST00000619541 CLUAP1Q96AJ1 413 aa18.48■□□□□ 0.55
SYNRG-225ENST00000619541 SPINK5Q9NQ38 1064 aaPredicted RBP18.48■□□□□ 0.55
SYNRG-225ENST00000619541 POLR1AO95602 1720 aaPredicted RBP18.48■□□□□ 0.55
SYNRG-225ENST00000619541 A0A0U1RQG5 324 aaPredicted RBP18.47■□□□□ 0.55
SYNRG-225ENST00000619541 TRPM1Q7Z4N2 1603 aa18.47■□□□□ 0.55
SYNRG-225ENST00000619541 BCL2L13Q9BXK5 485 aa18.46■□□□□ 0.55
SYNRG-225ENST00000619541 DEPDC5O75140 1603 aa18.46■□□□□ 0.55
SYNRG-225ENST00000619541 POGZQ7Z3K3 1410 aa18.46■□□□□ 0.55
SYNRG-225ENST00000619541 ERBB4Q15303 1308 aa18.46■□□□□ 0.55
SYNRG-225ENST00000619541 PTPRTO14522 1441 aa18.46■□□□□ 0.55
SYNRG-225ENST00000619541 FSD2A1L4K1 749 aa18.45■□□□□ 0.54
SYNRG-225ENST00000619541 SLFN5Q08AF3 891 aa18.45■□□□□ 0.54
SYNRG-225ENST00000619541 CHMP5Q9NZZ3 219 aa18.45■□□□□ 0.54
SYNRG-225ENST00000619541 FOXD4L1Q9NU39 408 aa18.45■□□□□ 0.54
SYNRG-225ENST00000619541 KIAA1211Q6ZU35 1233 aa18.44■□□□□ 0.54
SYNRG-225ENST00000619541 MROH1Q8NDA8 1641 aa18.44■□□□□ 0.54
SYNRG-225ENST00000619541 TMF1P82094 1093 aa18.44■□□□□ 0.54
SYNRG-225ENST00000619541 GPRASP1Q5JY77 1395 aa18.44■□□□□ 0.54
SYNRG-225ENST00000619541 PPP2R1AP30153 589 aa18.43■□□□□ 0.54
SYNRG-225ENST00000619541 VWDEQ8N2E2 1590 aa18.43■□□□□ 0.54
SYNRG-225ENST00000619541 UGGT1Q9NYU2 1555 aa18.43■□□□□ 0.54
SYNRG-225ENST00000619541 TRPM2O94759 1503 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms