RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 NINLQ9Y2I6 1382 aa19.32■□□□□ 0.68
SRRT-217ENST00000618411 TBC1D2Q9BYX2 928 aa19.32■□□□□ 0.68
SRRT-217ENST00000618411 BCAR3O75815 825 aa19.31■□□□□ 0.68
SRRT-217ENST00000618411 CCDC144AA2RUR9 1427 aa19.31■□□□□ 0.68
SRRT-217ENST00000618411 MRE11P49959 708 aa19.31■□□□□ 0.68
SRRT-217ENST00000618411 CLUAP1Q96AJ1 413 aa19.31■□□□□ 0.68
SRRT-217ENST00000618411 PANK2Q9BZ23 570 aa19.3■□□□□ 0.68
SRRT-217ENST00000618411 KNSTRNQ9Y448 316 aa19.3■□□□□ 0.68
SRRT-217ENST00000618411 E9PSI1 815 aa19.29■□□□□ 0.68
SRRT-217ENST00000618411 CDC42BPAQ5VT25 1732 aa19.29■□□□□ 0.68
SRRT-217ENST00000618411 TSPY4P0CV99 314 aa19.29■□□□□ 0.68
SRRT-217ENST00000618411 TSPY10P0CW01 314 aa19.29■□□□□ 0.68
SRRT-217ENST00000618411 ABCC10Q5T3U5 1492 aa19.29■□□□□ 0.68
SRRT-217ENST00000618411 PDS5BQ9NTI5 1447 aa19.28■□□□□ 0.68
SRRT-217ENST00000618411 PIK3C2GO75747 1445 aa19.28■□□□□ 0.68
SRRT-217ENST00000618411 NGEFQ8N5V2 710 aa19.28■□□□□ 0.68
SRRT-217ENST00000618411 ISY1Q9ULR0 285 aaKnown RBP19.28■□□□□ 0.68
SRRT-217ENST00000618411 AAMPQ13685 434 aa19.27■□□□□ 0.68
SRRT-217ENST00000618411 A2MP01023 1474 aa19.27■□□□□ 0.68
SRRT-217ENST00000618411 EIF2AK4Q9P2K8 1649 aaKnown RBP19.27■□□□□ 0.68
SRRT-217ENST00000618411 SPINK5Q9NQ38 1064 aaPredicted RBP19.27■□□□□ 0.68
SRRT-217ENST00000618411 FAM135AQ9P2D6 1515 aa19.27■□□□□ 0.67
SRRT-217ENST00000618411 AMER1Q5JTC6 1135 aaPredicted RBP19.26■□□□□ 0.67
SRRT-217ENST00000618411 ARXQ96QS3 562 aa19.26■□□□□ 0.67
SRRT-217ENST00000618411 MAGI2Q86UL8 1455 aa19.26■□□□□ 0.67
SRRT-217ENST00000618411 WDR7Q9Y4E6 1490 aa19.26■□□□□ 0.67
SRRT-217ENST00000618411 RGL3Q3MIN7 710 aa19.26■□□□□ 0.67
SRRT-217ENST00000618411 ABCC2Q92887 1545 aa19.26■□□□□ 0.67
SRRT-217ENST00000618411 NUP160Q12769 1436 aa19.26■□□□□ 0.67
SRRT-217ENST00000618411 TRAK2O60296 914 aa19.25■□□□□ 0.67
SRRT-217ENST00000618411 CHMP5Q9NZZ3 219 aa19.25■□□□□ 0.67
SRRT-217ENST00000618411 PMFBP1Q8TBY8 1022 aa19.24■□□□□ 0.67
SRRT-217ENST00000618411 GZF1Q9H116 711 aaPredicted RBP19.24■□□□□ 0.67
SRRT-217ENST00000618411 MYH16Q9H6N6 1097 aa19.24■□□□□ 0.67
SRRT-217ENST00000618411 ESPNB1AK53 854 aa19.24■□□□□ 0.67
SRRT-217ENST00000618411 APAF1O14727 1248 aa19.22■□□□□ 0.67
SRRT-217ENST00000618411 CCDC141Q6ZP82 1450 aa19.22■□□□□ 0.67
SRRT-217ENST00000618411 COG6Q9Y2V7 657 aa19.22■□□□□ 0.67
SRRT-217ENST00000618411 GRPEL1Q9HAV7 217 aa19.21■□□□□ 0.67
SRRT-217ENST00000618411 NPC1L1Q9UHC9 1359 aa19.21■□□□□ 0.67
SRRT-217ENST00000618411 CENPJQ9HC77 1338 aaPredicted RBP19.21■□□□□ 0.67
SRRT-217ENST00000618411 CCDC146Q8IYE0 955 aa19.21■□□□□ 0.67
SRRT-217ENST00000618411 PLXNC1O60486 1568 aa19.2■□□□□ 0.66
SRRT-217ENST00000618411 PANK1Q8TE04 598 aa19.2■□□□□ 0.66
SRRT-217ENST00000618411 ASXL1Q8IXJ9 1541 aa19.2■□□□□ 0.66
SRRT-217ENST00000618411 SYNJ2O15056 1496 aa19.19■□□□□ 0.66
SRRT-217ENST00000618411 PLA2R1Q13018 1463 aa19.19■□□□□ 0.66
SRRT-217ENST00000618411 CANXP27824 592 aaKnown RBP19.19■□□□□ 0.66
SRRT-217ENST00000618411 DDX11L8A8MPP1 907 aa19.19■□□□□ 0.66
SRRT-217ENST00000618411 TPM2P07951 284 aa19.18■□□□□ 0.66
SRRT-217ENST00000618411 CDCA8Q53HL2 280 aa19.18■□□□□ 0.66
SRRT-217ENST00000618411 ARHGEF5Q12774 1597 aa19.18■□□□□ 0.66
SRRT-217ENST00000618411 SYNMO15061 1565 aa19.16■□□□□ 0.66
SRRT-217ENST00000618411 PLB1Q6P1J6 1458 aa19.16■□□□□ 0.66
SRRT-217ENST00000618411 PDZRN3Q9UPQ7 1066 aa19.16■□□□□ 0.66
SRRT-217ENST00000618411 MYO5CQ9NQX4 1742 aa19.16■□□□□ 0.66
SRRT-217ENST00000618411 RNF17Q9BXT8 1623 aaKnown RBP19.16■□□□□ 0.66
SRRT-217ENST00000618411 SPRYD3Q8NCJ5 442 aa19.15■□□□□ 0.66
SRRT-217ENST00000618411 ERBB4Q15303 1308 aa19.14■□□□□ 0.66
SRRT-217ENST00000618411 TRIM44Q96DX7 344 aaPredicted RBP19.14■□□□□ 0.65
SRRT-217ENST00000618411 PCDHB15Q9Y5E8 787 aa19.14■□□□□ 0.65
SRRT-217ENST00000618411 DMRT2Q9Y5R5 561 aa19.14■□□□□ 0.65
SRRT-217ENST00000618411 PLEKHD1A6NEE1 506 aa19.13■□□□□ 0.65
SRRT-217ENST00000618411 PDCL3Q9H2J4 239 aa19.13■□□□□ 0.65
SRRT-217ENST00000618411 RWDD1Q9H446 243 aaPredicted RBP19.13■□□□□ 0.65
SRRT-217ENST00000618411 C22orf23Q9BZE7 217 aa19.13■□□□□ 0.65
SRRT-217ENST00000618411 HNRNPMP52272 730 aaKnown RBP eCLIP19.11■□□□□ 0.65
SRRT-217ENST00000618411 RTEL1-TNFRSF6BF6WH68 1400 aa19.11■□□□□ 0.65
SRRT-217ENST00000618411 ZNF692Q9BU19 519 aaPredicted RBP19.1■□□□□ 0.65
SRRT-217ENST00000618411 UNC13BO14795 1591 aa19.09■□□□□ 0.65
SRRT-217ENST00000618411 WWC1Q8IX03 1113 aa19.09■□□□□ 0.65
SRRT-217ENST00000618411 ATP10AO60312 1499 aa19.09■□□□□ 0.65
SRRT-217ENST00000618411 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
SRRT-217ENST00000618411 RARSP54136 660 aaKnown RBP19.09■□□□□ 0.65
SRRT-217ENST00000618411 RSPH4AQ5TD94 716 aa19.09■□□□□ 0.65
SRRT-217ENST00000618411 HSCBQ8IWL3 235 aa19.08■□□□□ 0.64
SRRT-217ENST00000618411 IQGAP1P46940 1657 aa19.07■□□□□ 0.64
SRRT-217ENST00000618411 NCOA3Q9Y6Q9 1424 aa19.07■□□□□ 0.64
SRRT-217ENST00000618411 DDIT3P35638 169 aa19.07■□□□□ 0.64
SRRT-217ENST00000618411 SKOR2Q2VWA4 1001 aaPredicted RBP19.06■□□□□ 0.64
SRRT-217ENST00000618411 GRIN2AQ12879 1464 aa19.05■□□□□ 0.64
SRRT-217ENST00000618411 RLBP1P12271 317 aa19.05■□□□□ 0.64
SRRT-217ENST00000618411 PTMSP20962 102 aa19.05■□□□□ 0.64
SRRT-217ENST00000618411 CIZ1Q9ULV3 898 aaPredicted RBP19.05■□□□□ 0.64
SRRT-217ENST00000618411 SCAPERQ9BY12 1400 aa19.04■□□□□ 0.64
SRRT-217ENST00000618411 MFAP1P55081 439 aaKnown RBP19.03■□□□□ 0.64
SRRT-217ENST00000618411 IQGAP3Q86VI3 1631 aa19.03■□□□□ 0.64
SRRT-217ENST00000618411 GAS2L3Q86XJ1 694 aa19.03■□□□□ 0.64
SRRT-217ENST00000618411 MYOM1P52179 1685 aa19.03■□□□□ 0.64
SRRT-217ENST00000618411 GBP4Q96PP9 640 aa19.03■□□□□ 0.64
SRRT-217ENST00000618411 SNX21Q969T3 373 aa19.02■□□□□ 0.64
SRRT-217ENST00000618411 SCAF11Q99590 1463 aaKnown RBP19.01■□□□□ 0.63
SRRT-217ENST00000618411 ABCA8O94911 1581 aa19.01■□□□□ 0.63
SRRT-217ENST00000618411 TERF1P54274 439 aa19.01■□□□□ 0.63
SRRT-217ENST00000618411 KIAA1211Q6ZU35 1233 aa19.01■□□□□ 0.63
SRRT-217ENST00000618411 CCDC173Q0VFZ6 552 aa19.01■□□□□ 0.63
SRRT-217ENST00000618411 SMC5Q8IY18 1101 aa19■□□□□ 0.63
SRRT-217ENST00000618411 TNPO1Q92973 898 aaKnown RBP19■□□□□ 0.63
SRRT-217ENST00000618411 PPP1R9BQ96SB3 815 aa19■□□□□ 0.63
SRRT-217ENST00000618411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19■□□□□ 0.631e-7■■■□□ 18.8
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms