RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 IDI1Q13907 227 aa10.78□□□□□ -0.68
NEK3-207ENST00000617054 CNTLNQ9NXG0 1405 aa10.78□□□□□ -0.68
NEK3-207ENST00000617054 ABCC3O15438 1527 aa10.78□□□□□ -0.68
NEK3-207ENST00000617054 ARID4BQ4LE39 1312 aaPredicted RBP10.78□□□□□ -0.68
NEK3-207ENST00000617054 RNF17Q9BXT8 1623 aaKnown RBP10.77□□□□□ -0.68
NEK3-207ENST00000617054 SENP3-EIF4A1A0A087X0R7 540 aa10.77□□□□□ -0.68
NEK3-207ENST00000617054 TULP1O00294 542 aaPredicted RBP10.77□□□□□ -0.68
NEK3-207ENST00000617054 TMEM132EQ6IEE7 984 aa10.77□□□□□ -0.68
NEK3-207ENST00000617054 PRKRIP1Q9H875 184 aaPredicted RBP10.76□□□□□ -0.69
NEK3-207ENST00000617054 TESK2Q96S53 571 aa10.76□□□□□ -0.69
NEK3-207ENST00000617054 DISP3Q9P2K9 1392 aa10.75□□□□□ -0.69
NEK3-207ENST00000617054 SIGLEC1Q9BZZ2 1709 aa10.75□□□□□ -0.69
NEK3-207ENST00000617054 NOS1P29475 1434 aa10.75□□□□□ -0.69
NEK3-207ENST00000617054 LMTK2Q8IWU2 1503 aa10.74□□□□□ -0.69
NEK3-207ENST00000617054 MROH2AA6NES4 1674 aa10.74□□□□□ -0.69
NEK3-207ENST00000617054 CCER2I3L3R5 266 aa10.74□□□□□ -0.69
NEK3-207ENST00000617054 FAM9BQ8IZU0 186 aa10.74□□□□□ -0.69
NEK3-207ENST00000617054 TRAK1Q9UPV9 953 aa10.73□□□□□ -0.69
NEK3-207ENST00000617054 GPRASP1Q5JY77 1395 aa10.73□□□□□ -0.69
NEK3-207ENST00000617054 CAMSAP1Q5T5Y3 1602 aa10.73□□□□□ -0.69
NEK3-207ENST00000617054 MADDQ8WXG6 1647 aa10.72□□□□□ -0.69
NEK3-207ENST00000617054 KIF1BO60333 1816 aa10.72□□□□□ -0.69
NEK3-207ENST00000617054 STAG3Q9UJ98 1225 aa10.72□□□□□ -0.69
NEK3-207ENST00000617054 MRS2Q9HD23 443 aa10.71□□□□□ -0.69
NEK3-207ENST00000617054 ZMYM4Q5VZL5 1548 aa10.71□□□□□ -0.69
NEK3-207ENST00000617054 SAFB2Q14151 953 aaKnown RBP eCLIP10.71□□□□□ -0.69
NEK3-207ENST00000617054 ESF1Q9H501 851 aaKnown RBP10.71□□□□□ -0.7
NEK3-207ENST00000617054 SYNMO15061 1565 aa10.71□□□□□ -0.7
NEK3-207ENST00000617054 TMF1P82094 1093 aa10.7□□□□□ -0.7
NEK3-207ENST00000617054 CEBPAP49715 358 aaPredicted RBP10.7□□□□□ -0.7
NEK3-207ENST00000617054 PANK3Q9H999 370 aa10.7□□□□□ -0.7
NEK3-207ENST00000617054 STK26Q9P289 416 aa10.7□□□□□ -0.7
NEK3-207ENST00000617054 CC2D1BQ5T0F9 858 aaKnown RBP10.69□□□□□ -0.7
NEK3-207ENST00000617054 POLR1AO95602 1720 aaPredicted RBP10.68□□□□□ -0.7
NEK3-207ENST00000617054 HNRNPUQ00839 825 aaKnown RBP eCLIP10.68□□□□□ -0.7
NEK3-207ENST00000617054 ADGRB3O60242 1522 aa10.68□□□□□ -0.7
NEK3-207ENST00000617054 SLC52A1Q9NWF4 448 aa10.68□□□□□ -0.7
NEK3-207ENST00000617054 CLTCQ00610 1675 aaKnown RBP10.67□□□□□ -0.7
NEK3-207ENST00000617054 C14orf93Q9H972 538 aaKnown RBP10.67□□□□□ -0.7
NEK3-207ENST00000617054 SCAF11Q99590 1463 aaKnown RBP10.66□□□□□ -0.7
NEK3-207ENST00000617054 VGFO15240 615 aaPredicted RBP10.66□□□□□ -0.7
NEK3-207ENST00000617054 STAC3Q96MF2 364 aa10.66□□□□□ -0.7
NEK3-207ENST00000617054 PER1O15534 1290 aaPredicted RBP10.66□□□□□ -0.7
NEK3-207ENST00000617054 ARHGAP31Q2M1Z3 1444 aa10.66□□□□□ -0.7
NEK3-207ENST00000617054 ZMYM3Q14202 1370 aa10.66□□□□□ -0.7
NEK3-207ENST00000617054 SLC4A2P04920 1241 aa10.66□□□□□ -0.7
NEK3-207ENST00000617054 MYO5BQ9ULV0 1848 aa10.65□□□□□ -0.7
NEK3-207ENST00000617054 PREX1Q8TCU6 1659 aa10.64□□□□□ -0.71
NEK3-207ENST00000617054 PIK3C2GO75747 1445 aa10.64□□□□□ -0.71
NEK3-207ENST00000617054 MYOM2P54296 1465 aa10.64□□□□□ -0.71
NEK3-207ENST00000617054 IFT172Q9UG01 1749 aa10.63□□□□□ -0.71
NEK3-207ENST00000617054 ERVK-7P63135 1459 aa10.63□□□□□ -0.71
NEK3-207ENST00000617054 RPGRIP1LQ68CZ1 1315 aa10.63□□□□□ -0.71
NEK3-207ENST00000617054 ARHGEF40Q8TER5 1519 aa10.63□□□□□ -0.71
NEK3-207ENST00000617054 PIK3C2BO00750 1634 aa10.63□□□□□ -0.71
NEK3-207ENST00000617054 PPLO60437 1756 aa10.63□□□□□ -0.71
NEK3-207ENST00000617054 TMC1Q8TDI8 760 aa10.62□□□□□ -0.71
NEK3-207ENST00000617054 IQGAP1P46940 1657 aa10.62□□□□□ -0.71
NEK3-207ENST00000617054 ZC3H13Q5T200 1668 aaKnown RBP10.62□□□□□ -0.71
NEK3-207ENST00000617054 LAMC1P11047 1609 aa10.62□□□□□ -0.71
NEK3-207ENST00000617054 AGLP35573 1532 aa10.62□□□□□ -0.71
NEK3-207ENST00000617054 NRXN1Q9ULB1 1477 aa10.62□□□□□ -0.71
NEK3-207ENST00000617054 CENPJQ9HC77 1338 aaPredicted RBP10.62□□□□□ -0.71
NEK3-207ENST00000617054 NEXMIFQ5QGS0 1516 aa10.61□□□□□ -0.71
NEK3-207ENST00000617054 CNKSR2Q8WXI2 1034 aa10.61□□□□□ -0.71
NEK3-207ENST00000617054 BCANQ96GW7 911 aa10.61□□□□□ -0.71
NEK3-207ENST00000617054 EIF3AQ14152 1382 aaKnown RBP10.61□□□□□ -0.71
NEK3-207ENST00000617054 DNAJC5Q9H3Z4 198 aa10.6□□□□□ -0.71
NEK3-207ENST00000617054 TMEM131LA2VDJ0 1609 aa10.6□□□□□ -0.71
NEK3-207ENST00000617054 NEURL4Q96JN8 1562 aa10.6□□□□□ -0.71
NEK3-207ENST00000617054 SLC12A5Q9H2X9 1139 aa10.6□□□□□ -0.71
NEK3-207ENST00000617054 SALL2Q9Y467 1007 aaPredicted RBP10.6□□□□□ -0.71
NEK3-207ENST00000617054 KNSTRNQ9Y448 316 aa10.59□□□□□ -0.71
NEK3-207ENST00000617054 CABP2Q9NPB3 220 aa10.59□□□□□ -0.71
NEK3-207ENST00000617054 REREQ9P2R6 1566 aa10.59□□□□□ -0.71
NEK3-207ENST00000617054 MINK1Q8N4C8 1332 aaPredicted RBP10.58□□□□□ -0.72
NEK3-207ENST00000617054 WAPLQ7Z5K2 1190 aa10.58□□□□□ -0.72
NEK3-207ENST00000617054 PRAM1Q96QH2 718 aa10.58□□□□□ -0.72
NEK3-207ENST00000617054 CARD14Q9BXL6 1004 aa10.58□□□□□ -0.72
NEK3-207ENST00000617054 KTN1Q86UP2 1357 aaKnown RBP10.58□□□□□ -0.72
NEK3-207ENST00000617054 ADGRB1O14514 1584 aa10.58□□□□□ -0.72
NEK3-207ENST00000617054 ATF5Q9Y2D1 282 aaPredicted RBP10.57□□□□□ -0.72
NEK3-207ENST00000617054 CDCA8Q53HL2 280 aa10.57□□□□□ -0.72
NEK3-207ENST00000617054 PNISRQ8TF01 805 aaKnown RBP10.57□□□□□ -0.72
NEK3-207ENST00000617054 KIAA1210Q9ULL0 1709 aa10.57□□□□□ -0.72
NEK3-207ENST00000617054 MYBBP1AQ9BQG0 1328 aaKnown RBP10.57□□□□□ -0.72
NEK3-207ENST00000617054 A2ML1A8K2U0 1454 aa10.57□□□□□ -0.72
NEK3-207ENST00000617054 RALBP1Q15311 655 aa10.57□□□□□ -0.72
NEK3-207ENST00000617054 POGKQ9P215 609 aa10.57□□□□□ -0.72
NEK3-207ENST00000617054 TNNT2P45379 298 aaPredicted RBP10.56□□□□□ -0.72
NEK3-207ENST00000617054 RIMS2Q9UQ26 1411 aa10.55□□□□□ -0.72
NEK3-207ENST00000617054 TNRQ92752 1358 aa10.55□□□□□ -0.72
NEK3-207ENST00000617054 SRPK2P78362 688 aaKnown RBP10.55□□□□□ -0.72
NEK3-207ENST00000617054 SPATA31D1Q6ZQQ2 1576 aa10.54□□□□□ -0.72
NEK3-207ENST00000617054 PARD3Q8TEW0 1356 aa10.54□□□□□ -0.72
NEK3-207ENST00000617054 LTKP29376 864 aa10.54□□□□□ -0.72
NEK3-207ENST00000617054 TXNDC2Q86VQ3 553 aa10.54□□□□□ -0.72
NEK3-207ENST00000617054 ASXL1Q8IXJ9 1541 aa10.53□□□□□ -0.72
NEK3-207ENST00000617054 IRX6P78412 446 aaPredicted RBP10.53□□□□□ -0.72
NEK3-207ENST00000617054 NLRP13Q86W25 1043 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms