RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 C1orf141Q5JVX7 400 aa23.03■■□□□ 1.28
CDH23-212ENST00000616684 CFAP70Q5T0N1 1121 aa23.02■■□□□ 1.28
CDH23-212ENST00000616684 CCDC9Q9Y3X0 531 aaKnown RBP23.02■■□□□ 1.28
CDH23-212ENST00000616684 NBPF8Q3BBV2 869 aa23.01■■□□□ 1.27
CDH23-212ENST00000616684 DDX49Q9Y6V7 483 aaKnown RBP23.01■■□□□ 1.27
CDH23-212ENST00000616684 EIF2S2P20042 333 aaKnown RBP23■■□□□ 1.27
CDH23-212ENST00000616684 NBPF1Q3BBV0 1214 aa23■■□□□ 1.27
CDH23-212ENST00000616684 CDCA7LQ96GN5 454 aa23■■□□□ 1.27
CDH23-212ENST00000616684 GSE1Q14687 1217 aa22.99■■□□□ 1.27
CDH23-212ENST00000616684 CABP2Q9NPB3 220 aa22.99■■□□□ 1.27
CDH23-212ENST00000616684 HMOX1P09601 288 aa22.98■■□□□ 1.27
CDH23-212ENST00000616684 MTHFSP49914 203 aa22.98■■□□□ 1.27
CDH23-212ENST00000616684 PANK1Q8TE04 598 aa22.98■■□□□ 1.27
CDH23-212ENST00000616684 GNAI1P63096 354 aa22.98■■□□□ 1.27
CDH23-212ENST00000616684 KIF3AQ9Y496 699 aa22.98■■□□□ 1.27
CDH23-212ENST00000616684 REC8O95072 547 aa22.97■■□□□ 1.27
CDH23-212ENST00000616684 NECTIN2Q92692 538 aa22.97■■□□□ 1.27
CDH23-212ENST00000616684 PHF14O94880 888 aa22.96■■□□□ 1.27
CDH23-212ENST00000616684 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.96■■□□□ 1.27
CDH23-212ENST00000616684 CCDC34Q96HJ3 373 aa22.96■■□□□ 1.27
CDH23-212ENST00000616684 C9orf78Q9NZ63 289 aaPredicted RBP22.96■■□□□ 1.27
CDH23-212ENST00000616684 HFM1A2PYH4 1435 aa22.95■■□□□ 1.26
CDH23-212ENST00000616684 FAM69CQ0P6D2 419 aa22.95■■□□□ 1.26
CDH23-212ENST00000616684 FKBP5Q13451 457 aaPredicted RBP22.95■■□□□ 1.26
CDH23-212ENST00000616684 TCP11L2Q8N4U5 519 aa22.95■■□□□ 1.26
CDH23-212ENST00000616684 LNPKQ9C0E8 428 aa22.95■■□□□ 1.26
CDH23-212ENST00000616684 TOMM22Q9NS69 142 aa22.95■■□□□ 1.26
CDH23-212ENST00000616684 EFCAB5A4FU69 1503 aa22.95■■□□□ 1.26
CDH23-212ENST00000616684 PPP2R1AP30153 589 aa22.94■■□□□ 1.26
CDH23-212ENST00000616684 TPM4P67936 248 aa22.94■■□□□ 1.26
CDH23-212ENST00000616684 NEXNQ0ZGT2 675 aa22.94■■□□□ 1.26
CDH23-212ENST00000616684 DIAPH3Q9NSV4 1193 aa22.94■■□□□ 1.26
CDH23-212ENST00000616684 ARHGAP5Q13017 1502 aa22.94■■□□□ 1.26
CDH23-212ENST00000616684 NESP48681 1621 aa22.94■■□□□ 1.26
CDH23-212ENST00000616684 SYNJ2O15056 1496 aa22.94■■□□□ 1.26
CDH23-212ENST00000616684 FOXD4L6Q3SYB3 417 aaPredicted RBP22.93■■□□□ 1.26
CDH23-212ENST00000616684 FOXD4L3Q6VB84 417 aaPredicted RBP22.93■■□□□ 1.26
CDH23-212ENST00000616684 TOP2BQ02880 1626 aa22.93■■□□□ 1.26
CDH23-212ENST00000616684 KIAA1107Q9UPP5 1409 aa22.92■■□□□ 1.26
CDH23-212ENST00000616684 SKOR2Q2VWA4 1001 aaPredicted RBP22.92■■□□□ 1.26
CDH23-212ENST00000616684 GTF2E1P29083 439 aaPredicted RBP22.92■■□□□ 1.26
CDH23-212ENST00000616684 SF3A1Q15459 793 aaKnown RBP22.92■■□□□ 1.26
CDH23-212ENST00000616684 AAMPQ13685 434 aa22.91■■□□□ 1.26
CDH23-212ENST00000616684 ATP6V1DQ9Y5K8 247 aa22.91■■□□□ 1.26
CDH23-212ENST00000616684 ROCK1Q13464 1354 aa22.9■■□□□ 1.26
CDH23-212ENST00000616684 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.9■■□□□ 1.26
CDH23-212ENST00000616684 PRG4Q92954 1404 aaPredicted RBP22.9■■□□□ 1.26
CDH23-212ENST00000616684 TTC5Q8N0Z6 440 aa22.89■■□□□ 1.26
CDH23-212ENST00000616684 CHMP5Q9NZZ3 219 aa22.89■■□□□ 1.26
CDH23-212ENST00000616684 FRAT2O75474 233 aaPredicted RBP22.89■■□□□ 1.26
CDH23-212ENST00000616684 ARID3AQ99856 593 aa22.89■■□□□ 1.26
CDH23-212ENST00000616684 TSPYL4Q9UJ04 414 aa22.89■■□□□ 1.26
CDH23-212ENST00000616684 C9orf84Q5VXU9 1444 aa22.89■■□□□ 1.26
CDH23-212ENST00000616684 RUFY2Q8WXA3 655 aa22.89■■□□□ 1.25
CDH23-212ENST00000616684 EHBP1L1Q8N3D4 1523 aa22.89■■□□□ 1.25
CDH23-212ENST00000616684 PSME1Q06323 249 aa22.89■■□□□ 1.25
CDH23-212ENST00000616684 TIAM1Q13009 1591 aa22.88■■□□□ 1.25
CDH23-212ENST00000616684 POLA1P09884 1462 aaPredicted RBP22.88■■□□□ 1.25
CDH23-212ENST00000616684 H3BQV1 296 aa22.88■■□□□ 1.25
CDH23-212ENST00000616684 IFFO2Q5TF58 517 aa22.88■■□□□ 1.25
CDH23-212ENST00000616684 TOPBP1Q92547 1522 aa22.88■■□□□ 1.25
CDH23-212ENST00000616684 TROQ12816 1431 aaPredicted RBP22.87■■□□□ 1.25
CDH23-212ENST00000616684 FAM184AQ8NB25 1140 aa22.87■■□□□ 1.25
CDH23-212ENST00000616684 ANO2Q9NQ90 1003 aa22.87■■□□□ 1.25
CDH23-212ENST00000616684 CLSTN1O94985 981 aa22.86■■□□□ 1.25
CDH23-212ENST00000616684 PNISRQ8TF01 805 aaKnown RBP22.86■■□□□ 1.25
CDH23-212ENST00000616684 ZKSCAN1P17029 563 aaPredicted RBP22.86■■□□□ 1.25
CDH23-212ENST00000616684 IFIT2P09913 472 aaKnown RBP22.85■■□□□ 1.25
CDH23-212ENST00000616684 C22orf23Q9BZE7 217 aa22.85■■□□□ 1.25
CDH23-212ENST00000616684 RASSF8Q8NHQ8 419 aa22.84■■□□□ 1.25
CDH23-212ENST00000616684 TMX4Q9H1E5 349 aaPredicted RBP22.84■■□□□ 1.25
CDH23-212ENST00000616684 DDX58O95786 925 aaKnown RBP22.83■■□□□ 1.25
CDH23-212ENST00000616684 SLC12A5Q9H2X9 1139 aa22.83■■□□□ 1.25
CDH23-212ENST00000616684 INTS3Q68E01 1043 aaKnown RBP22.82■■□□□ 1.24
CDH23-212ENST00000616684 EVA1CP58658 441 aa22.82■■□□□ 1.24
CDH23-212ENST00000616684 CHMP4CQ96CF2 233 aa22.81■■□□□ 1.24
CDH23-212ENST00000616684 CCDC184Q52MB2 194 aa22.81■■□□□ 1.24
CDH23-212ENST00000616684 G3BP1Q13283 466 aaKnown RBP eCLIP22.79■■□□□ 1.24
CDH23-212ENST00000616684 NLRP6P59044 892 aa22.79■■□□□ 1.24
CDH23-212ENST00000616684 EXOSC9Q06265 439 aaKnown RBP22.79■■□□□ 1.24
CDH23-212ENST00000616684 PRKAR2BP31323 418 aa22.79■■□□□ 1.24
CDH23-212ENST00000616684 LRRFIP1Q32MZ4 808 aaKnown RBP22.78■■□□□ 1.24
CDH23-212ENST00000616684 AKNAQ7Z591 1439 aa22.78■■□□□ 1.24
CDH23-212ENST00000616684 HMGXB3Q12766 1538 aa22.78■■□□□ 1.24
CDH23-212ENST00000616684 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.78■■□□□ 1.24
CDH23-212ENST00000616684 DAPK1P53355 1430 aa22.77■■□□□ 1.24
CDH23-212ENST00000616684 NUTM2GQ5VZR2 741 aa22.77■■□□□ 1.24
CDH23-212ENST00000616684 PRAM1Q96QH2 718 aa22.77■■□□□ 1.24
CDH23-212ENST00000616684 WDR97A6NE52 1622 aa22.77■■□□□ 1.23
CDH23-212ENST00000616684 PDE3AQ14432 1141 aa22.77■■□□□ 1.23
CDH23-212ENST00000616684 HSP90AB4PQ58FF6 505 aa22.77■■□□□ 1.23
CDH23-212ENST00000616684 MCTP1Q6DN14 999 aa22.77■■□□□ 1.23
CDH23-212ENST00000616684 NAIPQ13075 1403 aa22.76■■□□□ 1.23
CDH23-212ENST00000616684 CREBRFQ8IUR6 639 aa22.76■■□□□ 1.23
CDH23-212ENST00000616684 MRC2Q9UBG0 1479 aa22.76■■□□□ 1.23
CDH23-212ENST00000616684 IFT140Q96RY7 1462 aa22.76■■□□□ 1.23
CDH23-212ENST00000616684 CPLX2Q6PUV4 134 aaKnown RBP22.75■■□□□ 1.23
CDH23-212ENST00000616684 NFKBIBQ15653 356 aa22.75■■□□□ 1.23
CDH23-212ENST00000616684 RAPGEF4Q8WZA2 1011 aa22.75■■□□□ 1.23
CDH23-212ENST00000616684 SCAPERQ9BY12 1400 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms