RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 VARS2Q5ST30 1063 aaKnown RBP11.58□□□□□ -0.56
MALAT1-208ENST00000616527 PTCD2Q8WV60 388 aaKnown RBP11.58□□□□□ -0.56
MALAT1-208ENST00000616527 TSHZ2Q9NRE2 1034 aa11.58□□□□□ -0.56
MALAT1-208ENST00000616527 CDK13Q14004 1512 aaKnown RBP11.58□□□□□ -0.56
MALAT1-208ENST00000616527 HFM1A2PYH4 1435 aa11.58□□□□□ -0.56
MALAT1-208ENST00000616527 PTPRGP23470 1445 aa11.58□□□□□ -0.56
MALAT1-208ENST00000616527 PLB1Q6P1J6 1458 aa11.57□□□□□ -0.56
MALAT1-208ENST00000616527 ZNF316A6NFI3 1004 aaPredicted RBP11.56□□□□□ -0.56
MALAT1-208ENST00000616527 NUDT7P0C024 238 aa11.56□□□□□ -0.56
MALAT1-208ENST00000616527 PPP1R15BQ5SWA1 713 aa11.56□□□□□ -0.56
MALAT1-208ENST00000616527 PTPN23Q9H3S7 1636 aa11.54□□□□□ -0.56
MALAT1-208ENST00000616527 LARP6Q9BRS8 491 aaKnown RBP11.54□□□□□ -0.56
MALAT1-208ENST00000616527 TIMELESSQ9UNS1 1208 aa11.54□□□□□ -0.56
MALAT1-208ENST00000616527 ATP10BO94823 1461 aa11.54□□□□□ -0.56
MALAT1-208ENST00000616527 CLASP1Q7Z460 1538 aa11.54□□□□□ -0.56
MALAT1-208ENST00000616527 CADPS2Q86UW7 1296 aa11.53□□□□□ -0.56
MALAT1-208ENST00000616527 KRTAP3-3Q9BYR6 98 aa11.53□□□□□ -0.56
MALAT1-208ENST00000616527 KRTAP3-2Q9BYR7 98 aa11.53□□□□□ -0.56
MALAT1-208ENST00000616527 ROCK1Q13464 1354 aa11.53□□□□□ -0.56
MALAT1-208ENST00000616527 ADCY10Q96PN6 1610 aa11.53□□□□□ -0.56
MALAT1-208ENST00000616527 PTPRKQ15262 1439 aa11.52□□□□□ -0.56
MALAT1-208ENST00000616527 UACAQ9BZF9 1416 aa11.52□□□□□ -0.56
MALAT1-208ENST00000616527 CHD1O14646 1710 aa11.52□□□□□ -0.56
MALAT1-208ENST00000616527 PLEKHD1A6NEE1 506 aa11.52□□□□□ -0.57
MALAT1-208ENST00000616527 TBC1D12O60347 775 aa11.52□□□□□ -0.57
MALAT1-208ENST00000616527 DDX27Q96GQ7 796 aaKnown RBP11.52□□□□□ -0.57
MALAT1-208ENST00000616527 ITGAEP38570 1179 aa11.51□□□□□ -0.57
MALAT1-208ENST00000616527 MFSD10Q14728 455 aa11.51□□□□□ -0.57
MALAT1-208ENST00000616527 ZNF687Q8N1G0 1237 aa11.51□□□□□ -0.57
MALAT1-208ENST00000616527 NAIPQ13075 1403 aa11.51□□□□□ -0.57
MALAT1-208ENST00000616527 KDM4FA0A1W2PPD8 638 aa11.5□□□□□ -0.57
MALAT1-208ENST00000616527 LHX6Q9UPM6 363 aa11.5□□□□□ -0.57
MALAT1-208ENST00000616527 UHRF1BP1LA0JNW5 1464 aa11.5□□□□□ -0.57
MALAT1-208ENST00000616527 OXER1Q8TDS5 423 aa11.49□□□□□ -0.57
MALAT1-208ENST00000616527 GPATCH8Q9UKJ3 1502 aaKnown RBP11.49□□□□□ -0.57
MALAT1-208ENST00000616527 ABCC10Q5T3U5 1492 aa11.48□□□□□ -0.57
MALAT1-208ENST00000616527 MAPKBP1O60336 1514 aa11.47□□□□□ -0.57
MALAT1-208ENST00000616527 BCANQ96GW7 911 aa11.47□□□□□ -0.57
MALAT1-208ENST00000616527 ABCC2Q92887 1545 aa11.46□□□□□ -0.57
MALAT1-208ENST00000616527 ABCC5O15440 1437 aa11.45□□□□□ -0.58
MALAT1-208ENST00000616527 DAPK1P53355 1430 aa11.45□□□□□ -0.58
MALAT1-208ENST00000616527 SPNS2Q8IVW8 549 aa11.45□□□□□ -0.58
MALAT1-208ENST00000616527 UPF1Q92900 1129 aaKnown RBP eCLIP11.45□□□□□ -0.58
MALAT1-208ENST00000616527 CFDP1Q9UEE9 299 aaPredicted RBP11.45□□□□□ -0.58
MALAT1-208ENST00000616527 ITSN2Q9NZM3 1697 aa11.45□□□□□ -0.58
MALAT1-208ENST00000616527 DNMT1P26358 1616 aaKnown RBP11.44□□□□□ -0.58
MALAT1-208ENST00000616527 KIF14Q15058 1648 aa11.44□□□□□ -0.58
MALAT1-208ENST00000616527 PSDA5PKW4 1024 aaPredicted RBP11.43□□□□□ -0.58
MALAT1-208ENST00000616527 RSPH4AQ5TD94 716 aa11.43□□□□□ -0.58
MALAT1-208ENST00000616527 ADGRL2O95490 1459 aa11.43□□□□□ -0.58
MALAT1-208ENST00000616527 KDM5BQ9UGL1 1544 aa11.42□□□□□ -0.58
MALAT1-208ENST00000616527 ARID3CA6NKF2 412 aa11.42□□□□□ -0.58
MALAT1-208ENST00000616527 GCC2Q8IWJ2 1684 aa11.41□□□□□ -0.58
MALAT1-208ENST00000616527 CAMSAP2Q08AD1 1489 aa11.41□□□□□ -0.58
MALAT1-208ENST00000616527 SHANK2Q9UPX8 1470 aa11.41□□□□□ -0.58
MALAT1-208ENST00000616527 NCOA1Q15788 1441 aa11.39□□□□□ -0.59
MALAT1-208ENST00000616527 ERCC6L2Q5T890 1561 aa11.38□□□□□ -0.59
MALAT1-208ENST00000616527 PBX2P40425 430 aa11.38□□□□□ -0.59
MALAT1-208ENST00000616527 EMILIN3Q9NT22 766 aa11.38□□□□□ -0.59
MALAT1-208ENST00000616527 ZNF644Q9H582 1327 aaPredicted RBP11.37□□□□□ -0.59
MALAT1-208ENST00000616527 KIAA1107Q9UPP5 1409 aa11.37□□□□□ -0.59
MALAT1-208ENST00000616527 MMRN1Q13201 1228 aa11.37□□□□□ -0.59
MALAT1-208ENST00000616527 ARHGEF5Q12774 1597 aa11.37□□□□□ -0.59
MALAT1-208ENST00000616527 MAP3K9P80192 1104 aa11.36□□□□□ -0.59
MALAT1-208ENST00000616527 CAMK2BQ13554 666 aa11.36□□□□□ -0.59
MALAT1-208ENST00000616527 ANO8Q9HCE9 1232 aaPredicted RBP11.36□□□□□ -0.59
MALAT1-208ENST00000616527 RRP7BPQ9NSQ0 103 aa11.36□□□□□ -0.59
MALAT1-208ENST00000616527 ANKRD30AQ9BXX3 1397 aa11.36□□□□□ -0.59
MALAT1-208ENST00000616527 PLEKHH2Q8IVE3 1493 aa11.36□□□□□ -0.59
MALAT1-208ENST00000616527 PPP4R3BQ5MIZ7 849 aa11.35□□□□□ -0.59
MALAT1-208ENST00000616527 MBD5Q9P267 1494 aa11.35□□□□□ -0.59
MALAT1-208ENST00000616527 ARAP3Q8WWN8 1544 aa11.35□□□□□ -0.59
MALAT1-208ENST00000616527 EVI5O60447 810 aa11.34□□□□□ -0.59
MALAT1-208ENST00000616527 POTEEQ6S8J3 1075 aa11.34□□□□□ -0.59
MALAT1-208ENST00000616527 CHIC2Q9UKJ5 165 aa11.34□□□□□ -0.59
MALAT1-208ENST00000616527 CDC42BPAQ5VT25 1732 aa11.34□□□□□ -0.59
MALAT1-208ENST00000616527 DIEXFQ68CQ4 756 aaKnown RBP11.33□□□□□ -0.6
MALAT1-208ENST00000616527 PLCH2O75038 1416 aa11.33□□□□□ -0.6
MALAT1-208ENST00000616527 PREX2Q70Z35 1606 aa11.32□□□□□ -0.6
MALAT1-208ENST00000616527 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.32□□□□□ -0.6
MALAT1-208ENST00000616527 PPP1R15AO75807 674 aaPredicted RBP11.32□□□□□ -0.6
MALAT1-208ENST00000616527 TSPY4P0CV99 314 aa11.32□□□□□ -0.6
MALAT1-208ENST00000616527 TSPY10P0CW01 314 aa11.32□□□□□ -0.6
MALAT1-208ENST00000616527 PRKCSHP14314 528 aaPredicted RBP11.32□□□□□ -0.6
MALAT1-208ENST00000616527 LSM11P83369 360 aaKnown RBP eCLIP11.32□□□□□ -0.6
MALAT1-208ENST00000616527 ARHGAP33O14559 1287 aa11.31□□□□□ -0.6
MALAT1-208ENST00000616527 MPHOSPH9Q99550 1183 aa11.31□□□□□ -0.6
MALAT1-208ENST00000616527 AXIN2Q9Y2T1 843 aa11.31□□□□□ -0.6
MALAT1-208ENST00000616527 C9orf84Q5VXU9 1444 aa11.31□□□□□ -0.6
MALAT1-208ENST00000616527 DENND4BO75064 1496 aaPredicted RBP11.31□□□□□ -0.6
MALAT1-208ENST00000616527 CCDC141Q6ZP82 1450 aa11.31□□□□□ -0.6
MALAT1-208ENST00000616527 CROCC2H7BZ55 1655 aa11.3□□□□□ -0.6
MALAT1-208ENST00000616527 ANKRD13DQ6ZTN6 518 aa11.3□□□□□ -0.6
MALAT1-208ENST00000616527 ADGBQ8N7X0 1667 aa11.3□□□□□ -0.6
MALAT1-208ENST00000616527 MAST1Q9Y2H9 1570 aa11.29□□□□□ -0.6
MALAT1-208ENST00000616527 ZCCHC11Q5TAX3 1644 aaKnown RBP11.29□□□□□ -0.6
MALAT1-208ENST00000616527 ZNF454Q8N9F8 522 aa11.29□□□□□ -0.6
MALAT1-208ENST00000616527 SIN3AQ96ST3 1273 aa11.29□□□□□ -0.6
MALAT1-208ENST00000616527 ANKRD30BQ9BXX2 1392 aa11.28□□□□□ -0.6
MALAT1-208ENST00000616527 ANKRD50Q9ULJ7 1429 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms