RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 MED14O60244 1454 aa19.35■□□□□ 0.69
MDC1-209ENST00000613547 ZFYVE9O95405 1425 aa19.34■□□□□ 0.69
MDC1-209ENST00000613547 STRCQ7RTU9 1775 aa19.34■□□□□ 0.69
MDC1-209ENST00000613547 POLR1AO95602 1720 aaPredicted RBP19.34■□□□□ 0.69
MDC1-209ENST00000613547 RPGRIP1LQ68CZ1 1315 aa19.33■□□□□ 0.69
MDC1-209ENST00000613547 KIF1BO60333 1816 aa19.33■□□□□ 0.69
MDC1-209ENST00000613547 BCANQ96GW7 911 aa19.32■□□□□ 0.68
MDC1-209ENST00000613547 NEURL4Q96JN8 1562 aa19.32■□□□□ 0.68
MDC1-209ENST00000613547 RGL3Q3MIN7 710 aa19.31■□□□□ 0.68
MDC1-209ENST00000613547 SPATA31E1Q6ZUB1 1445 aa19.31■□□□□ 0.68
MDC1-209ENST00000613547 PLEKHG1Q9ULL1 1385 aa19.3■□□□□ 0.68
MDC1-209ENST00000613547 VGFO15240 615 aaPredicted RBP19.29■□□□□ 0.68
MDC1-209ENST00000613547 NUTM2DQ5VT03 806 aaPredicted RBP19.29■□□□□ 0.68
MDC1-209ENST00000613547 MYO5BQ9ULV0 1848 aa19.28■□□□□ 0.68
MDC1-209ENST00000613547 IQGAP1P46940 1657 aa19.27■□□□□ 0.68
MDC1-209ENST00000613547 NEXMIFQ5QGS0 1516 aa19.26■□□□□ 0.67
MDC1-209ENST00000613547 SLC26A8Q96RN1 970 aa19.22■□□□□ 0.67
MDC1-209ENST00000613547 SENP3Q9H4L4 574 aaPredicted RBP19.22■□□□□ 0.67
MDC1-209ENST00000613547 STAC3Q96MF2 364 aa19.21■□□□□ 0.67
MDC1-209ENST00000613547 NEUROD1Q13562 356 aa19.2■□□□□ 0.66
MDC1-209ENST00000613547 TBX22Q9Y458 520 aa19.2■□□□□ 0.66
MDC1-209ENST00000613547 ZNF335Q9H4Z2 1342 aaPredicted RBP19.19■□□□□ 0.66
MDC1-209ENST00000613547 DIP2AQ14689 1571 aa19.19■□□□□ 0.66
MDC1-209ENST00000613547 DCAF11Q8TEB1 546 aa19.18■□□□□ 0.66
MDC1-209ENST00000613547 SIN3AQ96ST3 1273 aa19.18■□□□□ 0.66
MDC1-209ENST00000613547 CLSPNQ9HAW4 1339 aa19.18■□□□□ 0.66
MDC1-209ENST00000613547 SETBP1Q9Y6X0 1596 aa19.18■□□□□ 0.66
MDC1-209ENST00000613547 MYOM2P54296 1465 aa19.17■□□□□ 0.66
MDC1-209ENST00000613547 PPLO60437 1756 aa19.17■□□□□ 0.66
MDC1-209ENST00000613547 CCER1Q8TC90 406 aaPredicted RBP19.17■□□□□ 0.66
MDC1-209ENST00000613547 ADAMTS13Q76LX8 1427 aa19.17■□□□□ 0.66
MDC1-209ENST00000613547 ADGRF5Q8IZF2 1346 aa19.16■□□□□ 0.66
MDC1-209ENST00000613547 KDM2AQ9Y2K7 1162 aa19.15■□□□□ 0.66
MDC1-209ENST00000613547 PIK3R4Q99570 1358 aa19.15■□□□□ 0.66
MDC1-209ENST00000613547 KCNA6P17658 529 aa19.13■□□□□ 0.65
MDC1-209ENST00000613547 IFT172Q9UG01 1749 aa19.13■□□□□ 0.65
MDC1-209ENST00000613547 CPS1P31327 1500 aa19.12■□□□□ 0.65
MDC1-209ENST00000613547 PIK3C2GO75747 1445 aa19.12■□□□□ 0.65
MDC1-209ENST00000613547 TONSLQ96HA7 1378 aa19.12■□□□□ 0.65
MDC1-209ENST00000613547 NRXN1Q9ULB1 1477 aa19.11■□□□□ 0.65
MDC1-209ENST00000613547 NRXN3Q9Y4C0 1643 aa19.11■□□□□ 0.65
MDC1-209ENST00000613547 L3MBTL2Q969R5 705 aa19.1■□□□□ 0.65
MDC1-209ENST00000613547 LTBP4Q8N2S1 1624 aa19.1■□□□□ 0.65
MDC1-209ENST00000613547 ALKQ9UM73 1620 aa19.08■□□□□ 0.65
MDC1-209ENST00000613547 METP08581 1390 aa19.07■□□□□ 0.64
MDC1-209ENST00000613547 CERKQ8TCT0 537 aa19.07■□□□□ 0.64
MDC1-209ENST00000613547 NKTRP30414 1462 aaKnown RBP19.07■□□□□ 0.64
MDC1-209ENST00000613547 C14orf93Q9H972 538 aaKnown RBP19.06■□□□□ 0.64
MDC1-209ENST00000613547 AMOTL2Q9Y2J4 779 aa19.06■□□□□ 0.64
MDC1-209ENST00000613547 NWD1Q149M9 1564 aa19.06■□□□□ 0.64
MDC1-209ENST00000613547 LAMC1P11047 1609 aa19.05■□□□□ 0.64
MDC1-209ENST00000613547 CFAP70Q5T0N1 1121 aa19.04■□□□□ 0.64
MDC1-209ENST00000613547 PROSER2Q86WR7 435 aaPredicted RBP19.04■□□□□ 0.64
MDC1-209ENST00000613547 TIMELESSQ9UNS1 1208 aa19.03■□□□□ 0.64
MDC1-209ENST00000613547 PRAG1Q86YV5 1406 aa19.02■□□□□ 0.64
MDC1-209ENST00000613547 PTPRUQ92729 1446 aa19.02■□□□□ 0.64
MDC1-209ENST00000613547 LRRC7Q96NW7 1537 aa19.02■□□□□ 0.64
MDC1-209ENST00000613547 IQSEC2Q5JU85 1478 aa19.02■□□□□ 0.63
MDC1-209ENST00000613547 CHD2O14647 1828 aaKnown RBP19■□□□□ 0.63
MDC1-209ENST00000613547 TMEM132EQ6IEE7 984 aa19■□□□□ 0.63
MDC1-209ENST00000613547 TMEM94Q12767 1356 aa19■□□□□ 0.63
MDC1-209ENST00000613547 LRPPRCP42704 1394 aaKnown RBP18.99■□□□□ 0.63
MDC1-209ENST00000613547 SETD1AO15047 1707 aaKnown RBP18.99■□□□□ 0.63
MDC1-209ENST00000613547 STRCP1A6NGW2 1772 aa18.98■□□□□ 0.63
MDC1-209ENST00000613547 XRN1Q8IZH2 1706 aaKnown RBP18.98■□□□□ 0.63
MDC1-209ENST00000613547 C14orf37Q86TY3 774 aa18.98■□□□□ 0.63
MDC1-209ENST00000613547 STK26Q9P289 416 aa18.98■□□□□ 0.63
MDC1-209ENST00000613547 PTCH1Q13635 1447 aa18.98■□□□□ 0.63
MDC1-209ENST00000613547 YTHDC2Q9H6S0 1430 aaKnown RBP18.98■□□□□ 0.63
MDC1-209ENST00000613547 ABCC11Q96J66 1382 aa18.96■□□□□ 0.63
MDC1-209ENST00000613547 ASXL1Q8IXJ9 1541 aa18.96■□□□□ 0.63
MDC1-209ENST00000613547 NCOA3Q9Y6Q9 1424 aa18.96■□□□□ 0.63
MDC1-209ENST00000613547 TECPR2O15040 1411 aa18.94■□□□□ 0.62
MDC1-209ENST00000613547 RBM33Q96EV2 1170 aaKnown RBP18.94■□□□□ 0.62
MDC1-209ENST00000613547 MSH6P52701 1360 aa18.93■□□□□ 0.62
MDC1-209ENST00000613547 ROBO2Q9HCK4 1378 aa18.93■□□□□ 0.62
MDC1-209ENST00000613547 ADGRB1O14514 1584 aa18.93■□□□□ 0.62
MDC1-209ENST00000613547 KIAA1210Q9ULL0 1709 aa18.93■□□□□ 0.62
MDC1-209ENST00000613547 SIRT1Q96EB6 747 aa18.91■□□□□ 0.62
MDC1-209ENST00000613547 ROCK2O75116 1388 aaKnown RBP18.91■□□□□ 0.62
MDC1-209ENST00000613547 FAM135BQ49AJ0 1406 aa18.91■□□□□ 0.62
MDC1-209ENST00000613547 UBAP1LF5GYI3 381 aa18.9■□□□□ 0.62
MDC1-209ENST00000613547 TOM1O60784 492 aa18.9■□□□□ 0.62
MDC1-209ENST00000613547 C19orf44Q9H6X5 657 aa18.9■□□□□ 0.62
MDC1-209ENST00000613547 TRAK1Q9UPV9 953 aa18.9■□□□□ 0.62
MDC1-209ENST00000613547 NBPF1Q3BBV0 1214 aa18.89■□□□□ 0.61
MDC1-209ENST00000613547 NBPF8Q3BBV2 869 aa18.89■□□□□ 0.61
MDC1-209ENST00000613547 POGKQ9P215 609 aa18.89■□□□□ 0.61
MDC1-209ENST00000613547 DLC1Q96QB1 1528 aa18.89■□□□□ 0.61
MDC1-209ENST00000613547 KNDC1Q76NI1 1749 aa18.88■□□□□ 0.61
MDC1-209ENST00000613547 ADGRL3Q9HAR2 1447 aa18.88■□□□□ 0.61
MDC1-209ENST00000613547 ATF3P18847 181 aa18.87■□□□□ 0.61
MDC1-209ENST00000613547 TRPM1Q7Z4N2 1603 aa18.87■□□□□ 0.61
MDC1-209ENST00000613547 FBXO41Q8TF61 875 aa18.87■□□□□ 0.61
MDC1-209ENST00000613547 PRAM1Q96QH2 718 aa18.87■□□□□ 0.61
MDC1-209ENST00000613547 RALGAPBQ86X10 1494 aa18.86■□□□□ 0.61
MDC1-209ENST00000613547 DCCP43146 1447 aa18.86■□□□□ 0.61
MDC1-209ENST00000613547 WAPLQ7Z5K2 1190 aa18.86■□□□□ 0.61
MDC1-209ENST00000613547 CADPS2Q86UW7 1296 aa18.86■□□□□ 0.61
MDC1-209ENST00000613547 CARD11Q9BXL7 1154 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 946.2 ms