RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 CCDC146Q8IYE0 955 aa21.28■■□□□ 1
TSKU-205ENST00000612930 NAP1L5Q96NT1 182 aaPredicted RBP21.28■■□□□ 1
TSKU-205ENST00000612930 PANK2Q9BZ23 570 aa21.28■■□□□ 1
TSKU-205ENST00000612930 GLIPR1L2Q4G1C9 344 aa21.27■■□□□ 1
TSKU-205ENST00000612930 AMER1Q5JTC6 1135 aaPredicted RBP21.27■■□□□ 1
TSKU-205ENST00000612930 PLA2R1Q13018 1463 aa21.27■■□□□ 1
TSKU-205ENST00000612930 GOLGA6L3A6NEY3 463 aa21.27■■□□□ 1
TSKU-205ENST00000612930 TBC1D2Q9BYX2 928 aa21.27■■□□□ 1
TSKU-205ENST00000612930 PNNQ9H307 717 aaKnown RBP21.26■□□□□ 0.99
TSKU-205ENST00000612930 KNSTRNQ9Y448 316 aa21.26■□□□□ 0.99
TSKU-205ENST00000612930 MYO5CQ9NQX4 1742 aa21.25■□□□□ 0.99
TSKU-205ENST00000612930 CGNL1Q0VF96 1302 aa21.25■□□□□ 0.99
TSKU-205ENST00000612930 CLUAP1Q96AJ1 413 aa21.25■□□□□ 0.99
TSKU-205ENST00000612930 APAF1O14727 1248 aa21.24■□□□□ 0.99
TSKU-205ENST00000612930 TBC1D32Q96NH3 1257 aa21.24■□□□□ 0.99
TSKU-205ENST00000612930 PDE3AQ14432 1141 aa21.23■□□□□ 0.99
TSKU-205ENST00000612930 DMRT2Q9Y5R5 561 aa21.23■□□□□ 0.99
TSKU-205ENST00000612930 EIF2AK4Q9P2K8 1649 aaKnown RBP21.23■□□□□ 0.99
TSKU-205ENST00000612930 MCM4P33991 863 aa21.22■□□□□ 0.99
TSKU-205ENST00000612930 HNRNPMP52272 730 aaKnown RBP eCLIP21.22■□□□□ 0.993e-6■■■■□ 20.5
TSKU-205ENST00000612930 PIK3C2GO75747 1445 aa21.22■□□□□ 0.99
TSKU-205ENST00000612930 PANK1Q8TE04 598 aa21.22■□□□□ 0.99
TSKU-205ENST00000612930 COG6Q9Y2V7 657 aa21.22■□□□□ 0.99
TSKU-205ENST00000612930 E9PSI1 815 aa21.21■□□□□ 0.99
TSKU-205ENST00000612930 VSIG10Q8N0Z9 540 aa21.21■□□□□ 0.99
TSKU-205ENST00000612930 GZF1Q9H116 711 aaPredicted RBP21.21■□□□□ 0.99
TSKU-205ENST00000612930 ABCC2Q92887 1545 aa21.2■□□□□ 0.98
TSKU-205ENST00000612930 CCDC141Q6ZP82 1450 aa21.2■□□□□ 0.98
TSKU-205ENST00000612930 ZMYND15Q9H091 742 aa21.2■□□□□ 0.98
TSKU-205ENST00000612930 HSP90AA2PQ14568 343 aaPredicted RBP21.19■□□□□ 0.98
TSKU-205ENST00000612930 SYNJ2O15056 1496 aa21.19■□□□□ 0.98
TSKU-205ENST00000612930 NUP160Q12769 1436 aa21.18■□□□□ 0.98
TSKU-205ENST00000612930 HSP90AA1P07900 732 aaKnown RBP21.18■□□□□ 0.98
TSKU-205ENST00000612930 RRP9O43818 475 aaKnown RBP21.18■□□□□ 0.98
TSKU-205ENST00000612930 ARHGEF5Q12774 1597 aa21.18■□□□□ 0.98
TSKU-205ENST00000612930 RNF17Q9BXT8 1623 aaKnown RBP21.17■□□□□ 0.98
TSKU-205ENST00000612930 SPRYD3Q8NCJ5 442 aa21.17■□□□□ 0.98
TSKU-205ENST00000612930 UPF2Q9HAU5 1272 aaKnown RBP21.17■□□□□ 0.98
TSKU-205ENST00000612930 ASXL1Q8IXJ9 1541 aa21.16■□□□□ 0.98
TSKU-205ENST00000612930 NINLQ9Y2I6 1382 aa21.15■□□□□ 0.98
TSKU-205ENST00000612930 CENPJQ9HC77 1338 aaPredicted RBP21.14■□□□□ 0.98
TSKU-205ENST00000612930 PLEKHD1A6NEE1 506 aa21.14■□□□□ 0.97
TSKU-205ENST00000612930 TRAK2O60296 914 aa21.14■□□□□ 0.97
TSKU-205ENST00000612930 SYNMO15061 1565 aa21.14■□□□□ 0.97
TSKU-205ENST00000612930 GRIN2AQ12879 1464 aa21.13■□□□□ 0.97
TSKU-205ENST00000612930 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
TSKU-205ENST00000612930 CANXP27824 592 aaKnown RBP21.13■□□□□ 0.97
TSKU-205ENST00000612930 PCDHB15Q9Y5E8 787 aa21.13■□□□□ 0.97
TSKU-205ENST00000612930 PLXNC1O60486 1568 aa21.13■□□□□ 0.97
TSKU-205ENST00000612930 ZMYM3Q14202 1370 aa21.13■□□□□ 0.97
TSKU-205ENST00000612930 MRE11P49959 708 aa21.12■□□□□ 0.97
TSKU-205ENST00000612930 PDZRN3Q9UPQ7 1066 aa21.12■□□□□ 0.97
TSKU-205ENST00000612930 PMFBP1Q8TBY8 1022 aa21.11■□□□□ 0.97
TSKU-205ENST00000612930 UNC13BO14795 1591 aa21.11■□□□□ 0.97
TSKU-205ENST00000612930 CHMP5Q9NZZ3 219 aa21.1■□□□□ 0.97
TSKU-205ENST00000612930 ERBB4Q15303 1308 aa21.1■□□□□ 0.97
TSKU-205ENST00000612930 NPC1L1Q9UHC9 1359 aa21.1■□□□□ 0.97
TSKU-205ENST00000612930 IQGAP1P46940 1657 aa21.09■□□□□ 0.97
TSKU-205ENST00000612930 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.09■□□□□ 0.97
TSKU-205ENST00000612930 MYOM1P52179 1685 aa21.08■□□□□ 0.97
TSKU-205ENST00000612930 ABCA8O94911 1581 aa21.08■□□□□ 0.97
TSKU-205ENST00000612930 GRPEL1Q9HAV7 217 aa21.08■□□□□ 0.97
TSKU-205ENST00000612930 RTEL1-TNFRSF6BF6WH68 1400 aa21.08■□□□□ 0.97
TSKU-205ENST00000612930 TNNQ9UQP3 1299 aa21.08■□□□□ 0.96
TSKU-205ENST00000612930 ESPNB1AK53 854 aa21.07■□□□□ 0.96
TSKU-205ENST00000612930 RLBP1P12271 317 aa21.07■□□□□ 0.96
TSKU-205ENST00000612930 SAMD9LQ8IVG5 1584 aa21.06■□□□□ 0.96
TSKU-205ENST00000612930 WWC1Q8IX03 1113 aa21.06■□□□□ 0.96
TSKU-205ENST00000612930 MYH16Q9H6N6 1097 aa21.06■□□□□ 0.96
TSKU-205ENST00000612930 ATP10BO94823 1461 aa21.06■□□□□ 0.96
TSKU-205ENST00000612930 DNAJC5BQ9UF47 199 aa21.06■□□□□ 0.96
TSKU-205ENST00000612930 NGEFQ8N5V2 710 aa21.05■□□□□ 0.96
TSKU-205ENST00000612930 IQGAP3Q86VI3 1631 aa21.04■□□□□ 0.96
TSKU-205ENST00000612930 RARSP54136 660 aaKnown RBP21.04■□□□□ 0.96
TSKU-205ENST00000612930 AAMPQ13685 434 aa21.03■□□□□ 0.96
TSKU-205ENST00000612930 CDCA8Q53HL2 280 aa21.03■□□□□ 0.96
TSKU-205ENST00000612930 ZNF692Q9BU19 519 aaPredicted RBP21.03■□□□□ 0.96
TSKU-205ENST00000612930 C22orf23Q9BZE7 217 aa21.03■□□□□ 0.96
TSKU-205ENST00000612930 ATP10AO60312 1499 aa21.03■□□□□ 0.96
TSKU-205ENST00000612930 MADDQ8WXG6 1647 aa21.02■□□□□ 0.96
TSKU-205ENST00000612930 CDC42BPBQ9Y5S2 1711 aa21.01■□□□□ 0.95
TSKU-205ENST00000612930 DDX11L8A8MPP1 907 aa21■□□□□ 0.95
TSKU-205ENST00000612930 RWDD1Q9H446 243 aaPredicted RBP21■□□□□ 0.95
TSKU-205ENST00000612930 ISY1Q9ULR0 285 aaKnown RBP20.99■□□□□ 0.95
TSKU-205ENST00000612930 MRC2Q9UBG0 1479 aa20.99■□□□□ 0.95
TSKU-205ENST00000612930 MFAP1P55081 439 aaKnown RBP20.99■□□□□ 0.95
TSKU-205ENST00000612930 IFT140Q96RY7 1462 aa20.98■□□□□ 0.95
TSKU-205ENST00000612930 SCAF11Q99590 1463 aaKnown RBP20.98■□□□□ 0.95
TSKU-205ENST00000612930 CARMIL2Q6F5E8 1435 aa20.98■□□□□ 0.95
TSKU-205ENST00000612930 GAS2L3Q86XJ1 694 aa20.98■□□□□ 0.95
TSKU-205ENST00000612930 RSPH4AQ5TD94 716 aa20.97■□□□□ 0.95
TSKU-205ENST00000612930 DDIT3P35638 169 aa20.97■□□□□ 0.95
TSKU-205ENST00000612930 BCL2L13Q9BXK5 485 aa20.97■□□□□ 0.95
TSKU-205ENST00000612930 SCAPERQ9BY12 1400 aa20.95■□□□□ 0.94
TSKU-205ENST00000612930 NCOA3Q9Y6Q9 1424 aa20.95■□□□□ 0.94
TSKU-205ENST00000612930 MAST1Q9Y2H9 1570 aa20.95■□□□□ 0.94
TSKU-205ENST00000612930 PREX2Q70Z35 1606 aa20.95■□□□□ 0.94
TSKU-205ENST00000612930 NEUROD2Q15784 382 aa20.94■□□□□ 0.94
TSKU-205ENST00000612930 KDM5AP29375 1690 aaKnown RBP20.94■□□□□ 0.94
TSKU-205ENST00000612930 HSCBQ8IWL3 235 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms