RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 CENPJQ9HC77 1338 aaPredicted RBP8.3□□□□□ -1.08
RPF2-204ENST00000607388 FOXD4L6Q3SYB3 417 aaPredicted RBP8.29□□□□□ -1.08
RPF2-204ENST00000607388 FOXD4L3Q6VB84 417 aaPredicted RBP8.29□□□□□ -1.08
RPF2-204ENST00000607388 BRD4O60885 1362 aaPredicted RBP8.29□□□□□ -1.08
RPF2-204ENST00000607388 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.29□□□□□ -1.08
RPF2-204ENST00000607388 CENPQQ7L2Z9 268 aaPredicted RBP8.29□□□□□ -1.08
RPF2-204ENST00000607388 EHBP1L1Q8N3D4 1523 aa8.29□□□□□ -1.08
RPF2-204ENST00000607388 RAPGEF3O95398 923 aa8.29□□□□□ -1.08
RPF2-204ENST00000607388 SRPK2P78362 688 aaKnown RBP8.29□□□□□ -1.08
RPF2-204ENST00000607388 PDE3BQ13370 1112 aa8.29□□□□□ -1.08
RPF2-204ENST00000607388 ASXL2Q76L83 1435 aa8.29□□□□□ -1.08
RPF2-204ENST00000607388 BECN1Q14457 450 aa8.28□□□□□ -1.08
RPF2-204ENST00000607388 STAG3Q9UJ98 1225 aa8.28□□□□□ -1.08
RPF2-204ENST00000607388 DUSP27Q5VZP5 1158 aa8.28□□□□□ -1.08
RPF2-204ENST00000607388 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.28□□□□□ -1.08
RPF2-204ENST00000607388 C1orf115Q9H7X2 142 aa8.28□□□□□ -1.08
RPF2-204ENST00000607388 MLECQ14165 292 aa8.28□□□□□ -1.08
RPF2-204ENST00000607388 SMC4Q9NTJ3 1288 aa8.28□□□□□ -1.08
RPF2-204ENST00000607388 NOL8Q76FK4 1167 aaKnown RBP8.27□□□□□ -1.09
RPF2-204ENST00000607388 GGNBP2Q9H3C7 697 aa8.27□□□□□ -1.09
RPF2-204ENST00000607388 PLEKHH1Q9ULM0 1364 aa8.27□□□□□ -1.09
RPF2-204ENST00000607388 PER1O15534 1290 aaPredicted RBP8.27□□□□□ -1.09
RPF2-204ENST00000607388 ZNF428Q96B54 188 aa8.27□□□□□ -1.09
RPF2-204ENST00000607388 LNPKQ9C0E8 428 aa8.27□□□□□ -1.09
RPF2-204ENST00000607388 MTHFSP49914 203 aa8.26□□□□□ -1.09
RPF2-204ENST00000607388 TCP11L2Q8N4U5 519 aa8.26□□□□□ -1.09
RPF2-204ENST00000607388 MS4A1P11836 297 aa8.26□□□□□ -1.09
RPF2-204ENST00000607388 C9orf84Q5VXU9 1444 aa8.26□□□□□ -1.09
RPF2-204ENST00000607388 CABP2Q9NPB3 220 aa8.25□□□□□ -1.09
RPF2-204ENST00000607388 SAMD9Q5K651 1589 aa8.25□□□□□ -1.09
RPF2-204ENST00000607388 CFAP43Q8NDM7 1665 aa8.25□□□□□ -1.09
RPF2-204ENST00000607388 PDZRN3Q9UPQ7 1066 aa8.25□□□□□ -1.09
RPF2-204ENST00000607388 ABCC2Q92887 1545 aa8.25□□□□□ -1.09
RPF2-204ENST00000607388 CAMSAP2Q08AD1 1489 aa8.25□□□□□ -1.09
RPF2-204ENST00000607388 C8orf34Q49A92 452 aa8.24□□□□□ -1.09
RPF2-204ENST00000607388 THUMPD2Q9BTF0 503 aaKnown RBP8.24□□□□□ -1.09
RPF2-204ENST00000607388 MPNDQ8N594 471 aa8.24□□□□□ -1.09
RPF2-204ENST00000607388 TESK2Q96S53 571 aa8.24□□□□□ -1.09
RPF2-204ENST00000607388 KDM5BQ9UGL1 1544 aa8.24□□□□□ -1.09
RPF2-204ENST00000607388 TEX14Q8IWB6 1497 aa8.24□□□□□ -1.09
RPF2-204ENST00000607388 SPATA31E1Q6ZUB1 1445 aa8.24□□□□□ -1.09
RPF2-204ENST00000607388 RAPGEF6Q8TEU7 1601 aa8.24□□□□□ -1.09
RPF2-204ENST00000607388 HMOX1P09601 288 aa8.24□□□□□ -1.09
RPF2-204ENST00000607388 RLBP1P12271 317 aa8.24□□□□□ -1.09
RPF2-204ENST00000607388 MIA2Q96PC5 1412 aa8.24□□□□□ -1.09
RPF2-204ENST00000607388 SHROOM2Q13796 1616 aa8.23□□□□□ -1.09
RPF2-204ENST00000607388 MINK1Q8N4C8 1332 aaPredicted RBP8.23□□□□□ -1.09
RPF2-204ENST00000607388 HSP90AB1P08238 724 aaKnown RBP8.23□□□□□ -1.09
RPF2-204ENST00000607388 SPAG9O60271 1321 aaKnown RBP8.23□□□□□ -1.09
RPF2-204ENST00000607388 MAPK8IP3Q9UPT6 1336 aa8.23□□□□□ -1.09
RPF2-204ENST00000607388 C14orf37Q86TY3 774 aa8.23□□□□□ -1.09
RPF2-204ENST00000607388 PANK2Q9BZ23 570 aa8.23□□□□□ -1.09
RPF2-204ENST00000607388 PZPP20742 1482 aa8.23□□□□□ -1.09
RPF2-204ENST00000607388 SLFN5Q08AF3 891 aa8.23□□□□□ -1.09
RPF2-204ENST00000607388 CDCA8Q53HL2 280 aa8.23□□□□□ -1.09
RPF2-204ENST00000607388 EFCAB2Q5VUJ9 269 aa8.23□□□□□ -1.09
RPF2-204ENST00000607388 PCDHB15Q9Y5E8 787 aa8.23□□□□□ -1.09
RPF2-204ENST00000607388 ADCY10Q96PN6 1610 aa8.23□□□□□ -1.09
RPF2-204ENST00000607388 TROQ12816 1431 aaPredicted RBP8.22□□□□□ -1.09
RPF2-204ENST00000607388 CFAP53Q96M91 514 aa8.22□□□□□ -1.09
RPF2-204ENST00000607388 CD109Q6YHK3 1445 aa8.21□□□□□ -1.09
RPF2-204ENST00000607388 EXOSC9Q06265 439 aaKnown RBP8.21□□□□□ -1.09
RPF2-204ENST00000607388 USP35Q9P2H5 1018 aa8.21□□□□□ -1.09
RPF2-204ENST00000607388 E9PSI1 815 aa8.21□□□□□ -1.1
RPF2-204ENST00000607388 ANKRD45Q5TZF3 282 aa8.21□□□□□ -1.1
RPF2-204ENST00000607388 RNF123Q5XPI4 1314 aa8.21□□□□□ -1.1
RPF2-204ENST00000607388 ERBINQ96RT1 1412 aa8.21□□□□□ -1.1
RPF2-204ENST00000607388 WWC1Q8IX03 1113 aa8.21□□□□□ -1.1
RPF2-204ENST00000607388 TRIM44Q96DX7 344 aaPredicted RBP8.21□□□□□ -1.1
RPF2-204ENST00000607388 GPATCH8Q9UKJ3 1502 aaKnown RBP8.2□□□□□ -1.1
RPF2-204ENST00000607388 ADGRF5Q8IZF2 1346 aa8.2□□□□□ -1.1
RPF2-204ENST00000607388 ABCA8O94911 1581 aa8.2□□□□□ -1.1
RPF2-204ENST00000607388 NECTIN2Q92692 538 aa8.2□□□□□ -1.1
RPF2-204ENST00000607388 DTNBO60941 627 aa8.2□□□□□ -1.1
RPF2-204ENST00000607388 BCORL1Q5H9F3 1711 aa8.2□□□□□ -1.1
RPF2-204ENST00000607388 HECW1Q76N89 1606 aa8.2□□□□□ -1.1
RPF2-204ENST00000607388 PLCB2Q00722 1185 aa8.2□□□□□ -1.1
RPF2-204ENST00000607388 HSCBQ8IWL3 235 aa8.2□□□□□ -1.1
RPF2-204ENST00000607388 WDR7Q9Y4E6 1490 aa8.19□□□□□ -1.1
RPF2-204ENST00000607388 CARD14Q9BXL6 1004 aa8.19□□□□□ -1.1
RPF2-204ENST00000607388 BCL11BQ9C0K0 894 aaPredicted RBP8.19□□□□□ -1.1
RPF2-204ENST00000607388 PLEKHH2Q8IVE3 1493 aa8.19□□□□□ -1.1
RPF2-204ENST00000607388 RWDD1Q9H446 243 aaPredicted RBP8.19□□□□□ -1.1
RPF2-204ENST00000607388 GOLGA6L3A6NEY3 463 aa8.18□□□□□ -1.1
RPF2-204ENST00000607388 PDIA4P13667 645 aaKnown RBP8.18□□□□□ -1.1
RPF2-204ENST00000607388 TSPOAP1O95153 1857 aa8.18□□□□□ -1.1
RPF2-204ENST00000607388 ROCK1Q13464 1354 aa8.18□□□□□ -1.1
RPF2-204ENST00000607388 TBC1D2Q9BYX2 928 aa8.18□□□□□ -1.1
RPF2-204ENST00000607388 C22orf23Q9BZE7 217 aa8.18□□□□□ -1.1
RPF2-204ENST00000607388 RIPK4P57078 832 aa8.17□□□□□ -1.1
RPF2-204ENST00000607388 PNNQ9H307 717 aaKnown RBP8.17□□□□□ -1.1
RPF2-204ENST00000607388 RBM42Q9BTD8 480 aaKnown RBP8.17□□□□□ -1.1
RPF2-204ENST00000607388 LRPPRCP42704 1394 aaKnown RBP8.17□□□□□ -1.1
RPF2-204ENST00000607388 DZIP1LQ8IYY4 767 aaKnown RBP8.17□□□□□ -1.1
RPF2-204ENST00000607388 ARHGAP5Q13017 1502 aa8.17□□□□□ -1.1
RPF2-204ENST00000607388 ZCCHC11Q5TAX3 1644 aaKnown RBP8.17□□□□□ -1.1
RPF2-204ENST00000607388 DCTN1Q14203 1278 aa8.16□□□□□ -1.1
RPF2-204ENST00000607388 SLC4A10Q6U841 1118 aa8.16□□□□□ -1.1
RPF2-204ENST00000607388 NOB1Q9ULX3 412 aaKnown RBP8.16□□□□□ -1.1
RPF2-204ENST00000607388 PARD3Q8TEW0 1356 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms