RNA–Protein interactions for RNA: ENST00000605086.5

FOCAD-216, Transcript of focadhesin, humanhuman

TSL 1 (best) BASIC

Gene FOCAD, Length 4,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-216ENST00000605086 IQGAP2Q13576 1575 aa9□□□□□ -0.97
FOCAD-216ENST00000605086 ZKSCAN2Q63HK3 967 aa9□□□□□ -0.97
FOCAD-216ENST00000605086 PLEKHH1Q9ULM0 1364 aa9□□□□□ -0.97
FOCAD-216ENST00000605086 ARID3AQ99856 593 aa9□□□□□ -0.97
FOCAD-216ENST00000605086 PTMAP06454 111 aaKnown RBP9□□□□□ -0.97
FOCAD-216ENST00000605086 XRCC6P12956 609 aaKnown RBP eCLIP8.99□□□□□ -0.97
FOCAD-216ENST00000605086 PTMSP20962 102 aa8.99□□□□□ -0.97
FOCAD-216ENST00000605086 PANK2Q9BZ23 570 aa8.99□□□□□ -0.97
FOCAD-216ENST00000605086 GRPEL1Q9HAV7 217 aa8.99□□□□□ -0.97
FOCAD-216ENST00000605086 ESPNB1AK53 854 aa8.99□□□□□ -0.97
FOCAD-216ENST00000605086 DZIP1LQ8IYY4 767 aaKnown RBP8.99□□□□□ -0.97
FOCAD-216ENST00000605086 DNTTIP2Q5QJE6 756 aaKnown RBP8.98□□□□□ -0.97
FOCAD-216ENST00000605086 AAMPQ13685 434 aa8.98□□□□□ -0.97
FOCAD-216ENST00000605086 DNAJC5BQ9UF47 199 aa8.98□□□□□ -0.97
FOCAD-216ENST00000605086 DDX49Q9Y6V7 483 aaKnown RBP8.98□□□□□ -0.97
FOCAD-216ENST00000605086 SKOR2Q2VWA4 1001 aaPredicted RBP8.98□□□□□ -0.97
FOCAD-216ENST00000605086 TCP11L2Q8N4U5 519 aa8.98□□□□□ -0.97
FOCAD-216ENST00000605086 NKTRP30414 1462 aaKnown RBP8.98□□□□□ -0.97
FOCAD-216ENST00000605086 RUNDC1Q96C34 613 aa8.98□□□□□ -0.97
FOCAD-216ENST00000605086 UHRF1BP1Q6BDS2 1440 aa8.97□□□□□ -0.97
FOCAD-216ENST00000605086 IPO8O15397 1037 aaKnown RBP8.97□□□□□ -0.97
FOCAD-216ENST00000605086 RRP9O43818 475 aaKnown RBP8.97□□□□□ -0.97
FOCAD-216ENST00000605086 TESK2Q96S53 571 aa8.97□□□□□ -0.97
FOCAD-216ENST00000605086 URB2Q14146 1524 aaKnown RBP8.97□□□□□ -0.97
FOCAD-216ENST00000605086 TBC1D32Q96NH3 1257 aa8.97□□□□□ -0.97
FOCAD-216ENST00000605086 SAMD9Q5K651 1589 aa8.97□□□□□ -0.97
FOCAD-216ENST00000605086 WWC1Q8IX03 1113 aa8.97□□□□□ -0.97
FOCAD-216ENST00000605086 CALD1Q05682 793 aaKnown RBP8.96□□□□□ -0.97
FOCAD-216ENST00000605086 SPINK5Q9NQ38 1064 aaPredicted RBP8.96□□□□□ -0.97
FOCAD-216ENST00000605086 KIF14Q15058 1648 aa8.96□□□□□ -0.97
FOCAD-216ENST00000605086 LNPKQ9C0E8 428 aa8.96□□□□□ -0.98
FOCAD-216ENST00000605086 BCORL1Q5H9F3 1711 aa8.95□□□□□ -0.98
FOCAD-216ENST00000605086 ZBTB7CA1YPR0 619 aa8.95□□□□□ -0.98
FOCAD-216ENST00000605086 CLCN1P35523 988 aa8.95□□□□□ -0.98
FOCAD-216ENST00000605086 ARHGEF11O15085 1522 aa8.95□□□□□ -0.98
FOCAD-216ENST00000605086 GPATCH8Q9UKJ3 1502 aaKnown RBP8.95□□□□□ -0.98
FOCAD-216ENST00000605086 NINLQ9Y2I6 1382 aa8.95□□□□□ -0.98
FOCAD-216ENST00000605086 DDX19BQ9UMR2 479 aa8.95□□□□□ -0.98
FOCAD-216ENST00000605086 DNMT1P26358 1616 aaKnown RBP8.95□□□□□ -0.98
FOCAD-216ENST00000605086 TPRNQ4KMQ1 711 aa8.95□□□□□ -0.98
FOCAD-216ENST00000605086 KDM5CP41229 1560 aa8.95□□□□□ -0.98
FOCAD-216ENST00000605086 RARSP54136 660 aaKnown RBP8.94□□□□□ -0.98
FOCAD-216ENST00000605086 AMER1Q5JTC6 1135 aaPredicted RBP8.94□□□□□ -0.98
FOCAD-216ENST00000605086 ANKRD45Q5TZF3 282 aa8.94□□□□□ -0.98
FOCAD-216ENST00000605086 TRAK1Q9UPV9 953 aa8.94□□□□□ -0.98
FOCAD-216ENST00000605086 BLMP54132 1417 aaPredicted RBP8.94□□□□□ -0.98
FOCAD-216ENST00000605086 ABCA5Q8WWZ7 1642 aa8.94□□□□□ -0.98
FOCAD-216ENST00000605086 CHMP4BQ9H444 224 aaKnown RBP8.94□□□□□ -0.98
FOCAD-216ENST00000605086 FAM13BQ9NYF5 915 aa8.94□□□□□ -0.98
FOCAD-216ENST00000605086 PCDHB15Q9Y5E8 787 aa8.94□□□□□ -0.98
FOCAD-216ENST00000605086 PRAG1Q86YV5 1406 aa8.94□□□□□ -0.98
FOCAD-216ENST00000605086 SAFB2Q14151 953 aaKnown RBP eCLIP8.94□□□□□ -0.98
FOCAD-216ENST00000605086 ZMYND15Q9H091 742 aa8.94□□□□□ -0.98
FOCAD-216ENST00000605086 NASPP49321 788 aaPredicted RBP8.94□□□□□ -0.98
FOCAD-216ENST00000605086 ZMYM4Q5VZL5 1548 aa8.93□□□□□ -0.98
FOCAD-216ENST00000605086 ISY1Q9ULR0 285 aaKnown RBP8.93□□□□□ -0.98
FOCAD-216ENST00000605086 PLB1Q6P1J6 1458 aa8.93□□□□□ -0.98
FOCAD-216ENST00000605086 CASC1Q6TDU7 716 aa8.93□□□□□ -0.98
FOCAD-216ENST00000605086 ARHGEF12Q9NZN5 1544 aa8.93□□□□□ -0.98
FOCAD-216ENST00000605086 NUP153P49790 1475 aaKnown RBP8.93□□□□□ -0.98
FOCAD-216ENST00000605086 MVPQ14764 893 aaKnown RBP8.93□□□□□ -0.98
FOCAD-216ENST00000605086 WDR62O43379 1518 aa8.93□□□□□ -0.98
FOCAD-216ENST00000605086 KIAA0586Q9BVV6 1533 aa8.93□□□□□ -0.98
FOCAD-216ENST00000605086 TPM2P07951 284 aa8.92□□□□□ -0.98
FOCAD-216ENST00000605086 MTHFSP49914 203 aa8.92□□□□□ -0.98
FOCAD-216ENST00000605086 EFCAB2Q5VUJ9 269 aa8.92□□□□□ -0.98
FOCAD-216ENST00000605086 CFAP70Q5T0N1 1121 aa8.92□□□□□ -0.98
FOCAD-216ENST00000605086 KANK1Q14678 1352 aa8.92□□□□□ -0.98
FOCAD-216ENST00000605086 KIAA1211Q6ZU35 1233 aa8.92□□□□□ -0.98
FOCAD-216ENST00000605086 LAMC3Q9Y6N6 1575 aa8.91□□□□□ -0.98
FOCAD-216ENST00000605086 APBB1O00213 710 aa8.91□□□□□ -0.98
FOCAD-216ENST00000605086 TSR2Q969E8 191 aaKnown RBP8.91□□□□□ -0.98
FOCAD-216ENST00000605086 PHF23Q9BUL5 403 aaPredicted RBP8.91□□□□□ -0.98
FOCAD-216ENST00000605086 MBD5Q9P267 1494 aa8.91□□□□□ -0.98
FOCAD-216ENST00000605086 TNNQ9UQP3 1299 aa8.91□□□□□ -0.98
FOCAD-216ENST00000605086 KIF3BO15066 747 aa8.91□□□□□ -0.98
FOCAD-216ENST00000605086 RBM10P98175 930 aaKnown RBP8.91□□□□□ -0.98
FOCAD-216ENST00000605086 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.91□□□□□ -0.98
FOCAD-216ENST00000605086 R3HCC1Q9Y3T6 440 aaKnown RBP8.91□□□□□ -0.98
FOCAD-216ENST00000605086 INSRP06213 1382 aa8.91□□□□□ -0.98
FOCAD-216ENST00000605086 PLCB2Q00722 1185 aa8.91□□□□□ -0.98
FOCAD-216ENST00000605086 EXOSC9Q06265 439 aaKnown RBP8.91□□□□□ -0.98
FOCAD-216ENST00000605086 WDR63Q8IWG1 891 aa8.9□□□□□ -0.98
FOCAD-216ENST00000605086 DMRT2Q9Y5R5 561 aa8.9□□□□□ -0.98
FOCAD-216ENST00000605086 COL17A1Q9UMD9 1497 aaPredicted RBP8.9□□□□□ -0.98
FOCAD-216ENST00000605086 RLBP1P12271 317 aa8.9□□□□□ -0.98
FOCAD-216ENST00000605086 SRPK2P78362 688 aaKnown RBP8.9□□□□□ -0.98
FOCAD-216ENST00000605086 FOXD4L5Q5VV16 416 aaPredicted RBP8.9□□□□□ -0.98
FOCAD-216ENST00000605086 MCTP1Q6DN14 999 aa8.9□□□□□ -0.98
FOCAD-216ENST00000605086 FOXD4L4Q8WXT5 416 aaPredicted RBP8.9□□□□□ -0.98
FOCAD-216ENST00000605086 SPAG9O60271 1321 aaKnown RBP8.9□□□□□ -0.98
FOCAD-216ENST00000605086 CCDC173Q0VFZ6 552 aa8.9□□□□□ -0.99
FOCAD-216ENST00000605086 TNPO1Q92973 898 aaKnown RBP8.9□□□□□ -0.99
FOCAD-216ENST00000605086 STAC3Q96MF2 364 aa8.89□□□□□ -0.99
FOCAD-216ENST00000605086 ELL2O00472 640 aaPredicted RBP8.89□□□□□ -0.99
FOCAD-216ENST00000605086 SLC12A5Q9H2X9 1139 aa8.89□□□□□ -0.99
FOCAD-216ENST00000605086 PTPRGP23470 1445 aa8.89□□□□□ -0.99
FOCAD-216ENST00000605086 ERCC6Q03468 1493 aa8.89□□□□□ -0.99
FOCAD-216ENST00000605086 CIZ1Q9ULV3 898 aaPredicted RBP8.88□□□□□ -0.99
FOCAD-216ENST00000605086 CAVIN1Q6NZI2 390 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms