RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 CLTCL1P53675 1640 aa22.85■■□□□ 1.25
LINC00221-201ENST00000603633 NPHP4O75161 1426 aaPredicted RBP22.85■■□□□ 1.25
LINC00221-201ENST00000603633 ZFYVE9O95405 1425 aa22.85■■□□□ 1.25
LINC00221-201ENST00000603633 VGFO15240 615 aaPredicted RBP22.84■■□□□ 1.25
LINC00221-201ENST00000603633 RGL3Q3MIN7 710 aa22.83■■□□□ 1.24
LINC00221-201ENST00000603633 BCANQ96GW7 911 aa22.82■■□□□ 1.24
LINC00221-201ENST00000603633 SPATA31E1Q6ZUB1 1445 aa22.82■■□□□ 1.24
LINC00221-201ENST00000603633 PLEKHG1Q9ULL1 1385 aa22.81■■□□□ 1.24
LINC00221-201ENST00000603633 NEURL4Q96JN8 1562 aa22.79■■□□□ 1.24
LINC00221-201ENST00000603633 NUTM2DQ5VT03 806 aaPredicted RBP22.78■■□□□ 1.24
LINC00221-201ENST00000603633 STAC3Q96MF2 364 aa22.78■■□□□ 1.24
LINC00221-201ENST00000603633 STRCQ7RTU9 1775 aa22.78■■□□□ 1.24
LINC00221-201ENST00000603633 TBX22Q9Y458 520 aa22.74■■□□□ 1.23
LINC00221-201ENST00000603633 SLC26A8Q96RN1 970 aa22.72■■□□□ 1.23
LINC00221-201ENST00000603633 NEXMIFQ5QGS0 1516 aa22.71■■□□□ 1.23
LINC00221-201ENST00000603633 CLSPNQ9HAW4 1339 aa22.71■■□□□ 1.23
LINC00221-201ENST00000603633 SIN3AQ96ST3 1273 aa22.7■■□□□ 1.22
LINC00221-201ENST00000603633 KIF1BO60333 1816 aa22.7■■□□□ 1.22
LINC00221-201ENST00000603633 POLR1AO95602 1720 aaPredicted RBP22.68■■□□□ 1.22
LINC00221-201ENST00000603633 NEUROD1Q13562 356 aa22.68■■□□□ 1.22
LINC00221-201ENST00000603633 DCAF11Q8TEB1 546 aa22.68■■□□□ 1.22
LINC00221-201ENST00000603633 IQGAP1P46940 1657 aa22.67■■□□□ 1.22
LINC00221-201ENST00000603633 ZNF335Q9H4Z2 1342 aaPredicted RBP22.67■■□□□ 1.22
LINC00221-201ENST00000603633 ADGRF5Q8IZF2 1346 aa22.66■■□□□ 1.22
LINC00221-201ENST00000603633 SENP3Q9H4L4 574 aaPredicted RBP22.65■■□□□ 1.22
LINC00221-201ENST00000603633 ADAMTS13Q76LX8 1427 aa22.65■■□□□ 1.22
LINC00221-201ENST00000603633 PIK3R4Q99570 1358 aa22.65■■□□□ 1.22
LINC00221-201ENST00000603633 KCNA6P17658 529 aa22.65■■□□□ 1.22
LINC00221-201ENST00000603633 CCER1Q8TC90 406 aaPredicted RBP22.63■■□□□ 1.21
LINC00221-201ENST00000603633 KDM2AQ9Y2K7 1162 aa22.63■■□□□ 1.21
LINC00221-201ENST00000603633 MYOM2P54296 1465 aa22.62■■□□□ 1.21
LINC00221-201ENST00000603633 SETBP1Q9Y6X0 1596 aa22.62■■□□□ 1.21
LINC00221-201ENST00000603633 MYO5BQ9ULV0 1848 aa22.61■■□□□ 1.21
LINC00221-201ENST00000603633 DIP2AQ14689 1571 aa22.6■■□□□ 1.21
LINC00221-201ENST00000603633 L3MBTL2Q969R5 705 aa22.6■■□□□ 1.21
LINC00221-201ENST00000603633 C14orf93Q9H972 538 aaKnown RBP22.58■■□□□ 1.21
LINC00221-201ENST00000603633 PIK3C2GO75747 1445 aa22.58■■□□□ 1.21
LINC00221-201ENST00000603633 NRXN1Q9ULB1 1477 aa22.58■■□□□ 1.2
LINC00221-201ENST00000603633 CERKQ8TCT0 537 aa22.57■■□□□ 1.2
LINC00221-201ENST00000603633 CPS1P31327 1500 aa22.57■■□□□ 1.2
LINC00221-201ENST00000603633 TONSLQ96HA7 1378 aa22.57■■□□□ 1.2
LINC00221-201ENST00000603633 AMOTL2Q9Y2J4 779 aa22.55■■□□□ 1.2
LINC00221-201ENST00000603633 METP08581 1390 aa22.55■■□□□ 1.2
LINC00221-201ENST00000603633 TIMELESSQ9UNS1 1208 aa22.55■■□□□ 1.2
LINC00221-201ENST00000603633 LTBP4Q8N2S1 1624 aa22.54■■□□□ 1.2
LINC00221-201ENST00000603633 PPLO60437 1756 aa22.53■■□□□ 1.2
LINC00221-201ENST00000603633 CFAP70Q5T0N1 1121 aa22.52■■□□□ 1.2
LINC00221-201ENST00000603633 PROSER2Q86WR7 435 aaPredicted RBP22.52■■□□□ 1.2
LINC00221-201ENST00000603633 ALKQ9UM73 1620 aa22.51■■□□□ 1.19
LINC00221-201ENST00000603633 NKTRP30414 1462 aaKnown RBP22.5■■□□□ 1.19
LINC00221-201ENST00000603633 NRXN3Q9Y4C0 1643 aa22.49■■□□□ 1.19
LINC00221-201ENST00000603633 PTPRUQ92729 1446 aa22.48■■□□□ 1.19
LINC00221-201ENST00000603633 TMEM132EQ6IEE7 984 aa22.47■■□□□ 1.19
LINC00221-201ENST00000603633 IQSEC2Q5JU85 1478 aa22.47■■□□□ 1.19
LINC00221-201ENST00000603633 IFT172Q9UG01 1749 aa22.47■■□□□ 1.19
LINC00221-201ENST00000603633 PRAG1Q86YV5 1406 aa22.46■■□□□ 1.19
LINC00221-201ENST00000603633 NCOA3Q9Y6Q9 1424 aa22.46■■□□□ 1.19
LINC00221-201ENST00000603633 LRPPRCP42704 1394 aaKnown RBP22.46■■□□□ 1.19
LINC00221-201ENST00000603633 NWD1Q149M9 1564 aa22.45■■□□□ 1.19
LINC00221-201ENST00000603633 TMEM94Q12767 1356 aa22.45■■□□□ 1.18
LINC00221-201ENST00000603633 ABCC11Q96J66 1382 aa22.45■■□□□ 1.18
LINC00221-201ENST00000603633 LRRC7Q96NW7 1537 aa22.45■■□□□ 1.18
LINC00221-201ENST00000603633 SIRT1Q96EB6 747 aa22.43■■□□□ 1.18
LINC00221-201ENST00000603633 STK26Q9P289 416 aa22.43■■□□□ 1.18
LINC00221-201ENST00000603633 PTCH1Q13635 1447 aa22.41■■□□□ 1.18
LINC00221-201ENST00000603633 YTHDC2Q9H6S0 1430 aaKnown RBP22.41■■□□□ 1.18
LINC00221-201ENST00000603633 C14orf37Q86TY3 774 aa22.4■■□□□ 1.18
LINC00221-201ENST00000603633 TECPR2O15040 1411 aa22.4■■□□□ 1.18
LINC00221-201ENST00000603633 LAMC1P11047 1609 aa22.38■■□□□ 1.17
LINC00221-201ENST00000603633 TOM1O60784 492 aa22.38■■□□□ 1.17
LINC00221-201ENST00000603633 C19orf44Q9H6X5 657 aa22.38■■□□□ 1.17
LINC00221-201ENST00000603633 MSH6P52701 1360 aa22.38■■□□□ 1.17
LINC00221-201ENST00000603633 ROBO2Q9HCK4 1378 aa22.38■■□□□ 1.17
LINC00221-201ENST00000603633 RBM33Q96EV2 1170 aaKnown RBP22.37■■□□□ 1.17
LINC00221-201ENST00000603633 CHD2O14647 1828 aaKnown RBP22.36■■□□□ 1.17
LINC00221-201ENST00000603633 NBPF1Q3BBV0 1214 aa22.36■■□□□ 1.17
LINC00221-201ENST00000603633 NBPF8Q3BBV2 869 aa22.36■■□□□ 1.17
LINC00221-201ENST00000603633 FAM135BQ49AJ0 1406 aa22.35■■□□□ 1.17
LINC00221-201ENST00000603633 ASXL1Q8IXJ9 1541 aa22.34■■□□□ 1.17
LINC00221-201ENST00000603633 UBAP1LF5GYI3 381 aa22.34■■□□□ 1.17
LINC00221-201ENST00000603633 TRAK1Q9UPV9 953 aa22.34■■□□□ 1.17
LINC00221-201ENST00000603633 ADGRB1O14514 1584 aa22.34■■□□□ 1.17
LINC00221-201ENST00000603633 SETD1AO15047 1707 aaKnown RBP22.34■■□□□ 1.17
LINC00221-201ENST00000603633 XRN1Q8IZH2 1706 aaKnown RBP22.34■■□□□ 1.17
LINC00221-201ENST00000603633 CADPS2Q86UW7 1296 aa22.33■■□□□ 1.17
LINC00221-201ENST00000603633 FBXO41Q8TF61 875 aa22.33■■□□□ 1.17
LINC00221-201ENST00000603633 ROCK2O75116 1388 aaKnown RBP22.33■■□□□ 1.17
LINC00221-201ENST00000603633 ATF3P18847 181 aa22.33■■□□□ 1.16
LINC00221-201ENST00000603633 POGKQ9P215 609 aa22.33■■□□□ 1.16
LINC00221-201ENST00000603633 STRCP1A6NGW2 1772 aa22.32■■□□□ 1.16
LINC00221-201ENST00000603633 WAPLQ7Z5K2 1190 aa22.32■■□□□ 1.16
LINC00221-201ENST00000603633 PRAM1Q96QH2 718 aa22.31■■□□□ 1.16
LINC00221-201ENST00000603633 DLC1Q96QB1 1528 aa22.29■■□□□ 1.16
LINC00221-201ENST00000603633 ADGRL3Q9HAR2 1447 aa22.28■■□□□ 1.16
LINC00221-201ENST00000603633 GPRASP1Q5JY77 1395 aa22.28■■□□□ 1.16
LINC00221-201ENST00000603633 DCCP43146 1447 aa22.28■■□□□ 1.16
LINC00221-201ENST00000603633 CARD11Q9BXL7 1154 aa22.27■■□□□ 1.16
LINC00221-201ENST00000603633 KIAA1210Q9ULL0 1709 aa22.26■■□□□ 1.15
LINC00221-201ENST00000603633 PLEKHH1Q9ULM0 1364 aa22.25■■□□□ 1.15
LINC00221-201ENST00000603633 RALGAPBQ86X10 1494 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms