RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 MPHOSPH9Q99550 1183 aa24.91■■□□□ 1.58
SSBP4-213ENST00000602088 CLTCL1P53675 1640 aa24.88■■□□□ 1.57
SSBP4-213ENST00000602088 FOXD1Q16676 465 aa24.87■■□□□ 1.57
SSBP4-213ENST00000602088 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.87■■□□□ 1.57
SSBP4-213ENST00000602088 IQSEC2Q5JU85 1478 aa24.86■■□□□ 1.57
SSBP4-213ENST00000602088 HRCP23327 699 aa24.85■■□□□ 1.57
SSBP4-213ENST00000602088 CPS1P31327 1500 aa24.85■■□□□ 1.57
SSBP4-213ENST00000602088 PLEKHG1Q9ULL1 1385 aa24.84■■□□□ 1.57
SSBP4-213ENST00000602088 PPP1R15AO75807 674 aaPredicted RBP24.84■■□□□ 1.57
SSBP4-213ENST00000602088 SLC26A8Q96RN1 970 aa24.82■■□□□ 1.56
SSBP4-213ENST00000602088 ZNF326Q5BKZ1 582 aaKnown RBP24.81■■□□□ 1.56
SSBP4-213ENST00000602088 NUTM2DQ5VT03 806 aaPredicted RBP24.81■■□□□ 1.56
SSBP4-213ENST00000602088 BCANQ96GW7 911 aa24.81■■□□□ 1.56
SSBP4-213ENST00000602088 KIF1BO60333 1816 aa24.81■■□□□ 1.56
SSBP4-213ENST00000602088 STRCP1A6NGW2 1772 aa24.8■■□□□ 1.56
SSBP4-213ENST00000602088 SENP3Q9H4L4 574 aaPredicted RBP24.78■■□□□ 1.56
SSBP4-213ENST00000602088 TBX22Q9Y458 520 aa24.75■■□□□ 1.55
SSBP4-213ENST00000602088 CCDC144AA2RUR9 1427 aa24.75■■□□□ 1.55
SSBP4-213ENST00000602088 NEXMIFQ5QGS0 1516 aa24.73■■□□□ 1.55
SSBP4-213ENST00000602088 LRRC7Q96NW7 1537 aa24.73■■□□□ 1.55
SSBP4-213ENST00000602088 KCNA6P17658 529 aa24.73■■□□□ 1.55
SSBP4-213ENST00000602088 ADAMTS13Q76LX8 1427 aa24.72■■□□□ 1.55
SSBP4-213ENST00000602088 RPGRIP1LQ68CZ1 1315 aa24.7■■□□□ 1.54
SSBP4-213ENST00000602088 DIP2AQ14689 1571 aa24.68■■□□□ 1.54
SSBP4-213ENST00000602088 UBAP1LF5GYI3 381 aa24.68■■□□□ 1.54
SSBP4-213ENST00000602088 SPATA31E1Q6ZUB1 1445 aa24.67■■□□□ 1.54
SSBP4-213ENST00000602088 NWD1Q149M9 1564 aa24.67■■□□□ 1.54
SSBP4-213ENST00000602088 SETBP1Q9Y6X0 1596 aa24.67■■□□□ 1.54
SSBP4-213ENST00000602088 CHD2O14647 1828 aaKnown RBP24.66■■□□□ 1.54
SSBP4-213ENST00000602088 VGFO15240 615 aaPredicted RBP24.66■■□□□ 1.54
SSBP4-213ENST00000602088 NRXN3Q9Y4C0 1643 aa24.65■■□□□ 1.54
SSBP4-213ENST00000602088 PIK3R4Q99570 1358 aa24.65■■□□□ 1.54
SSBP4-213ENST00000602088 RGL3Q3MIN7 710 aa24.64■■□□□ 1.54
SSBP4-213ENST00000602088 ANKRD30BQ9BXX2 1392 aa24.64■■□□□ 1.53
SSBP4-213ENST00000602088 NKTRP30414 1462 aaKnown RBP24.64■■□□□ 1.53
SSBP4-213ENST00000602088 PROSER2Q86WR7 435 aaPredicted RBP24.63■■□□□ 1.53
SSBP4-213ENST00000602088 PPLO60437 1756 aa24.62■■□□□ 1.53
SSBP4-213ENST00000602088 XIRP1Q702N8 1843 aaKnown RBP24.62■■□□□ 1.53
SSBP4-213ENST00000602088 TOM1O60784 492 aa24.61■■□□□ 1.53
SSBP4-213ENST00000602088 TMEM94Q12767 1356 aa24.6■■□□□ 1.53
SSBP4-213ENST00000602088 TRIM26Q12899 539 aaPredicted RBP24.57■■□□□ 1.52
SSBP4-213ENST00000602088 RBM33Q96EV2 1170 aaKnown RBP24.57■■□□□ 1.52
SSBP4-213ENST00000602088 AMOTL2Q9Y2J4 779 aa24.57■■□□□ 1.52
SSBP4-213ENST00000602088 PTPRUQ92729 1446 aa24.57■■□□□ 1.52
SSBP4-213ENST00000602088 METP08581 1390 aa24.56■■□□□ 1.52
SSBP4-213ENST00000602088 ALKQ9UM73 1620 aa24.56■■□□□ 1.52
SSBP4-213ENST00000602088 IFT172Q9UG01 1749 aa24.55■■□□□ 1.52
SSBP4-213ENST00000602088 ADGRF5Q8IZF2 1346 aa24.54■■□□□ 1.52
SSBP4-213ENST00000602088 PIP4K2BP78356 416 aa24.52■■□□□ 1.52
SSBP4-213ENST00000602088 SETD1AO15047 1707 aaKnown RBP24.5■■□□□ 1.51
SSBP4-213ENST00000602088 NCOA3Q9Y6Q9 1424 aa24.5■■□□□ 1.51
SSBP4-213ENST00000602088 XRN1Q8IZH2 1706 aaKnown RBP24.49■■□□□ 1.51
SSBP4-213ENST00000602088 SCAF1Q9H7N4 1312 aaKnown RBP24.49■■□□□ 1.51
SSBP4-213ENST00000602088 MSH6P52701 1360 aa24.46■■□□□ 1.51
SSBP4-213ENST00000602088 PIK3C2GO75747 1445 aa24.44■■□□□ 1.5
SSBP4-213ENST00000602088 MYOM2P54296 1465 aa24.44■■□□□ 1.5
SSBP4-213ENST00000602088 NRXN1Q9ULB1 1477 aa24.43■■□□□ 1.5
SSBP4-213ENST00000602088 C14orf37Q86TY3 774 aa24.42■■□□□ 1.5
SSBP4-213ENST00000602088 C19orf44Q9H6X5 657 aa24.41■■□□□ 1.5
SSBP4-213ENST00000602088 PRAG1Q86YV5 1406 aa24.39■■□□□ 1.5
SSBP4-213ENST00000602088 DCAF11Q8TEB1 546 aa24.39■■□□□ 1.49
SSBP4-213ENST00000602088 C14orf93Q9H972 538 aaKnown RBP24.39■■□□□ 1.49
SSBP4-213ENST00000602088 DHX57Q6P158 1386 aaKnown RBP24.39■■□□□ 1.49
SSBP4-213ENST00000602088 HSPA1LP34931 641 aa24.38■■□□□ 1.49
SSBP4-213ENST00000602088 STAC3Q96MF2 364 aa24.38■■□□□ 1.49
SSBP4-213ENST00000602088 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.38■■□□□ 1.49
SSBP4-213ENST00000602088 PTCH1Q13635 1447 aa24.37■■□□□ 1.49
SSBP4-213ENST00000602088 FAM135BQ49AJ0 1406 aa24.37■■□□□ 1.49
SSBP4-213ENST00000602088 SLAIN2Q9P270 581 aa24.37■■□□□ 1.49
SSBP4-213ENST00000602088 ROBO2Q9HCK4 1378 aa24.37■■□□□ 1.49
SSBP4-213ENST00000602088 TMEM132EQ6IEE7 984 aa24.36■■□□□ 1.49
SSBP4-213ENST00000602088 KDM2AQ9Y2K7 1162 aa24.36■■□□□ 1.49
SSBP4-213ENST00000602088 CFAP70Q5T0N1 1121 aa24.35■■□□□ 1.49
SSBP4-213ENST00000602088 CADPS2Q86UW7 1296 aa24.35■■□□□ 1.49
SSBP4-213ENST00000602088 ASXL1Q8IXJ9 1541 aa24.35■■□□□ 1.49
SSBP4-213ENST00000602088 ATF3P18847 181 aa24.34■■□□□ 1.49
SSBP4-213ENST00000602088 LRPPRCP42704 1394 aaKnown RBP24.33■■□□□ 1.49
SSBP4-213ENST00000602088 LAMC1P11047 1609 aa24.32■■□□□ 1.48
SSBP4-213ENST00000602088 STK26Q9P289 416 aa24.32■■□□□ 1.48
SSBP4-213ENST00000602088 DCCP43146 1447 aa24.32■■□□□ 1.48
SSBP4-213ENST00000602088 ADGRL3Q9HAR2 1447 aa24.32■■□□□ 1.48
SSBP4-213ENST00000602088 ABCC11Q96J66 1382 aa24.31■■□□□ 1.48
SSBP4-213ENST00000602088 TECPR2O15040 1411 aa24.31■■□□□ 1.48
SSBP4-213ENST00000602088 YTHDC2Q9H6S0 1430 aaKnown RBP24.3■■□□□ 1.48
SSBP4-213ENST00000602088 ROBO1Q9Y6N7 1651 aa24.3■■□□□ 1.48
SSBP4-213ENST00000602088 SIN3AQ96ST3 1273 aa24.29■■□□□ 1.48
SSBP4-213ENST00000602088 NALCNQ8IZF0 1738 aa24.29■■□□□ 1.48
SSBP4-213ENST00000602088 KNDC1Q76NI1 1749 aa24.27■■□□□ 1.48
SSBP4-213ENST00000602088 WAPLQ7Z5K2 1190 aa24.25■■□□□ 1.47
SSBP4-213ENST00000602088 SIRT1Q96EB6 747 aa24.24■■□□□ 1.47
SSBP4-213ENST00000602088 MST1RQ04912 1400 aa24.23■■□□□ 1.47
SSBP4-213ENST00000602088 ADGRB1O14514 1584 aa24.23■■□□□ 1.47
SSBP4-213ENST00000602088 NEUROD1Q13562 356 aa24.21■■□□□ 1.47
SSBP4-213ENST00000602088 L3MBTL2Q969R5 705 aa24.21■■□□□ 1.47
SSBP4-213ENST00000602088 PLEKHH1Q9ULM0 1364 aa24.2■■□□□ 1.46
SSBP4-213ENST00000602088 BRINP3Q76B58 766 aa24.19■■□□□ 1.46
SSBP4-213ENST00000602088 DLC1Q96QB1 1528 aa24.16■■□□□ 1.46
SSBP4-213ENST00000602088 C1orf167Q5SNV9 1468 aa24.15■■□□□ 1.46
SSBP4-213ENST00000602088 PRAM1Q96QH2 718 aa24.15■■□□□ 1.46
SSBP4-213ENST00000602088 PCGF6Q9BYE7 350 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms