RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 MED14O60244 1454 aa22.09■■□□□ 1.13
GTF2F1-206ENST00000598607 RIMS2Q9UQ26 1411 aa22.09■■□□□ 1.13
GTF2F1-206ENST00000598607 ZFYVE9O95405 1425 aa22.08■■□□□ 1.13
GTF2F1-206ENST00000598607 ZNF326Q5BKZ1 582 aaKnown RBP22.08■■□□□ 1.13
GTF2F1-206ENST00000598607 TXNDC2Q86VQ3 553 aa22.08■■□□□ 1.13
GTF2F1-206ENST00000598607 IFT172Q9UG01 1749 aa22.07■■□□□ 1.12
GTF2F1-206ENST00000598607 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.07■■□□□ 1.12
GTF2F1-206ENST00000598607 NEXMIFQ5QGS0 1516 aa22.06■■□□□ 1.12
GTF2F1-206ENST00000598607 NPHP4O75161 1426 aaPredicted RBP22.06■■□□□ 1.12
GTF2F1-206ENST00000598607 SPATA31E1Q6ZUB1 1445 aa22.05■■□□□ 1.12
GTF2F1-206ENST00000598607 LTKP29376 864 aa22.04■■□□□ 1.12
GTF2F1-206ENST00000598607 PPP1R15AO75807 674 aaPredicted RBP22.03■■□□□ 1.12
GTF2F1-206ENST00000598607 RPGRIP1LQ68CZ1 1315 aa22.03■■□□□ 1.12
GTF2F1-206ENST00000598607 PLEKHG1Q9ULL1 1385 aa21.99■■□□□ 1.11
GTF2F1-206ENST00000598607 RGL3Q3MIN7 710 aa21.98■■□□□ 1.11
GTF2F1-206ENST00000598607 DIP2AQ14689 1571 aa21.96■■□□□ 1.11
GTF2F1-206ENST00000598607 VGFO15240 615 aaPredicted RBP21.96■■□□□ 1.11
GTF2F1-206ENST00000598607 NUTM2DQ5VT03 806 aaPredicted RBP21.95■■□□□ 1.1
GTF2F1-206ENST00000598607 BCANQ96GW7 911 aa21.95■■□□□ 1.1
GTF2F1-206ENST00000598607 SETBP1Q9Y6X0 1596 aa21.95■■□□□ 1.1
GTF2F1-206ENST00000598607 NRXN3Q9Y4C0 1643 aa21.93■■□□□ 1.1
GTF2F1-206ENST00000598607 MYOM2P54296 1465 aa21.91■■□□□ 1.1
GTF2F1-206ENST00000598607 CHD2O14647 1828 aaKnown RBP21.9■■□□□ 1.1
GTF2F1-206ENST00000598607 STAC3Q96MF2 364 aa21.89■■□□□ 1.09
GTF2F1-206ENST00000598607 SIN3AQ96ST3 1273 aa21.88■■□□□ 1.09
GTF2F1-206ENST00000598607 SETD1AO15047 1707 aaKnown RBP21.88■■□□□ 1.09
GTF2F1-206ENST00000598607 ADAMTS13Q76LX8 1427 aa21.88■■□□□ 1.09
GTF2F1-206ENST00000598607 LAMC1P11047 1609 aa21.88■■□□□ 1.09
GTF2F1-206ENST00000598607 CLSPNQ9HAW4 1339 aa21.87■■□□□ 1.09
GTF2F1-206ENST00000598607 SLC26A8Q96RN1 970 aa21.87■■□□□ 1.09
GTF2F1-206ENST00000598607 STRCP1A6NGW2 1772 aa21.87■■□□□ 1.09
GTF2F1-206ENST00000598607 TBX22Q9Y458 520 aa21.86■■□□□ 1.09
GTF2F1-206ENST00000598607 NEUROD1Q13562 356 aa21.85■■□□□ 1.09
GTF2F1-206ENST00000598607 SENP3Q9H4L4 574 aaPredicted RBP21.85■■□□□ 1.09
GTF2F1-206ENST00000598607 ALKQ9UM73 1620 aa21.84■■□□□ 1.09
GTF2F1-206ENST00000598607 NRXN1Q9ULB1 1477 aa21.84■■□□□ 1.09
GTF2F1-206ENST00000598607 DCAF11Q8TEB1 546 aa21.84■■□□□ 1.09
GTF2F1-206ENST00000598607 PIK3R4Q99570 1358 aa21.84■■□□□ 1.09
GTF2F1-206ENST00000598607 LTBP4Q8N2S1 1624 aa21.84■■□□□ 1.09
GTF2F1-206ENST00000598607 ADGRF5Q8IZF2 1346 aa21.83■■□□□ 1.09
GTF2F1-206ENST00000598607 ZNF335Q9H4Z2 1342 aaPredicted RBP21.83■■□□□ 1.09
GTF2F1-206ENST00000598607 NWD1Q149M9 1564 aa21.83■■□□□ 1.09
GTF2F1-206ENST00000598607 PIK3C2GO75747 1445 aa21.83■■□□□ 1.09
GTF2F1-206ENST00000598607 CPS1P31327 1500 aa21.83■■□□□ 1.09
GTF2F1-206ENST00000598607 CCER1Q8TC90 406 aaPredicted RBP21.81■■□□□ 1.08
GTF2F1-206ENST00000598607 KDM2AQ9Y2K7 1162 aa21.79■■□□□ 1.08
GTF2F1-206ENST00000598607 KIAA1210Q9ULL0 1709 aa21.79■■□□□ 1.08
GTF2F1-206ENST00000598607 TONSLQ96HA7 1378 aa21.78■■□□□ 1.08
GTF2F1-206ENST00000598607 KCNA6P17658 529 aa21.78■■□□□ 1.08
GTF2F1-206ENST00000598607 XRN1Q8IZH2 1706 aaKnown RBP21.77■■□□□ 1.08
GTF2F1-206ENST00000598607 NKTRP30414 1462 aaKnown RBP21.77■■□□□ 1.08
GTF2F1-206ENST00000598607 L3MBTL2Q969R5 705 aa21.76■■□□□ 1.07
GTF2F1-206ENST00000598607 XIRP1Q702N8 1843 aaKnown RBP21.74■■□□□ 1.07
GTF2F1-206ENST00000598607 KNDC1Q76NI1 1749 aa21.74■■□□□ 1.07
GTF2F1-206ENST00000598607 METP08581 1390 aa21.74■■□□□ 1.07
GTF2F1-206ENST00000598607 IQSEC2Q5JU85 1478 aa21.73■■□□□ 1.07
GTF2F1-206ENST00000598607 C14orf93Q9H972 538 aaKnown RBP21.73■■□□□ 1.07
GTF2F1-206ENST00000598607 PRAG1Q86YV5 1406 aa21.72■■□□□ 1.07
GTF2F1-206ENST00000598607 PTPRUQ92729 1446 aa21.72■■□□□ 1.07
GTF2F1-206ENST00000598607 ASXL1Q8IXJ9 1541 aa21.7■■□□□ 1.07
GTF2F1-206ENST00000598607 LRRC7Q96NW7 1537 aa21.7■■□□□ 1.07
GTF2F1-206ENST00000598607 CERKQ8TCT0 537 aa21.7■■□□□ 1.06
GTF2F1-206ENST00000598607 AMOTL2Q9Y2J4 779 aa21.7■■□□□ 1.06
GTF2F1-206ENST00000598607 CFAP70Q5T0N1 1121 aa21.69■■□□□ 1.06
GTF2F1-206ENST00000598607 TRPM1Q7Z4N2 1603 aa21.69■■□□□ 1.06
GTF2F1-206ENST00000598607 TIMELESSQ9UNS1 1208 aa21.68■■□□□ 1.06
GTF2F1-206ENST00000598607 PROSER2Q86WR7 435 aaPredicted RBP21.67■■□□□ 1.06
GTF2F1-206ENST00000598607 ADGRB1O14514 1584 aa21.66■■□□□ 1.06
GTF2F1-206ENST00000598607 PTCH1Q13635 1447 aa21.65■■□□□ 1.06
GTF2F1-206ENST00000598607 YTHDC2Q9H6S0 1430 aaKnown RBP21.65■■□□□ 1.06
GTF2F1-206ENST00000598607 LRPPRCP42704 1394 aaKnown RBP21.65■■□□□ 1.06
GTF2F1-206ENST00000598607 TECPR2O15040 1411 aa21.63■■□□□ 1.05
GTF2F1-206ENST00000598607 NCOA3Q9Y6Q9 1424 aa21.63■■□□□ 1.05
GTF2F1-206ENST00000598607 TMEM132EQ6IEE7 984 aa21.63■■□□□ 1.05
GTF2F1-206ENST00000598607 TMEM94Q12767 1356 aa21.62■■□□□ 1.05
GTF2F1-206ENST00000598607 ABCC11Q96J66 1382 aa21.62■■□□□ 1.05
GTF2F1-206ENST00000598607 DLC1Q96QB1 1528 aa21.6■■□□□ 1.05
GTF2F1-206ENST00000598607 ARHGEF28Q8N1W1 1705 aaKnown RBP21.6■■□□□ 1.05
GTF2F1-206ENST00000598607 NALCNQ8IZF0 1738 aa21.59■■□□□ 1.05
GTF2F1-206ENST00000598607 STK26Q9P289 416 aa21.59■■□□□ 1.05
GTF2F1-206ENST00000598607 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.58■■□□□ 1.04
GTF2F1-206ENST00000598607 ROBO2Q9HCK4 1378 aa21.57■■□□□ 1.04
GTF2F1-206ENST00000598607 FAM135BQ49AJ0 1406 aa21.56■■□□□ 1.04
GTF2F1-206ENST00000598607 SIRT1Q96EB6 747 aa21.56■■□□□ 1.04
GTF2F1-206ENST00000598607 MSH6P52701 1360 aa21.56■■□□□ 1.04
GTF2F1-206ENST00000598607 NBPF8Q3BBV2 869 aa21.55■■□□□ 1.04
GTF2F1-206ENST00000598607 C14orf37Q86TY3 774 aa21.55■■□□□ 1.04
GTF2F1-206ENST00000598607 RALGAPBQ86X10 1494 aa21.55■■□□□ 1.04
GTF2F1-206ENST00000598607 ROCK2O75116 1388 aaKnown RBP21.54■■□□□ 1.04
GTF2F1-206ENST00000598607 RBM33Q96EV2 1170 aaKnown RBP21.54■■□□□ 1.04
GTF2F1-206ENST00000598607 NBPF1Q3BBV0 1214 aa21.53■■□□□ 1.04
GTF2F1-206ENST00000598607 ADGRL3Q9HAR2 1447 aa21.53■■□□□ 1.04
GTF2F1-206ENST00000598607 TRAK1Q9UPV9 953 aa21.52■■□□□ 1.04
GTF2F1-206ENST00000598607 C19orf44Q9H6X5 657 aa21.51■■□□□ 1.03
GTF2F1-206ENST00000598607 DCCP43146 1447 aa21.51■■□□□ 1.03
GTF2F1-206ENST00000598607 GPRASP1Q5JY77 1395 aa21.5■■□□□ 1.03
GTF2F1-206ENST00000598607 TOM1O60784 492 aa21.5■■□□□ 1.03
GTF2F1-206ENST00000598607 POGKQ9P215 609 aa21.49■■□□□ 1.03
GTF2F1-206ENST00000598607 UBAP1LF5GYI3 381 aa21.48■■□□□ 1.03
GTF2F1-206ENST00000598607 WAPLQ7Z5K2 1190 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms