RNA–Protein interactions for RNA: ENST00000597816.5

LTBP4-218, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-218ENST00000597816 ZFYVE9O95405 1425 aa24.03■■□□□ 1.44
LTBP4-218ENST00000597816 SPHKAPQ2M3C7 1700 aa24.03■■□□□ 1.44
LTBP4-218ENST00000597816 SETD5Q9C0A6 1442 aa24.02■■□□□ 1.44
LTBP4-218ENST00000597816 SLC26A8Q96RN1 970 aa24.02■■□□□ 1.44
LTBP4-218ENST00000597816 UBAP1LF5GYI3 381 aa24■■□□□ 1.43
LTBP4-218ENST00000597816 MPHOSPH9Q99550 1183 aa23.99■■□□□ 1.43
LTBP4-218ENST00000597816 PLEKHG1Q9ULL1 1385 aa23.99■■□□□ 1.43
LTBP4-218ENST00000597816 ZNF326Q5BKZ1 582 aaKnown RBP23.98■■□□□ 1.43
LTBP4-218ENST00000597816 NUTM2DQ5VT03 806 aaPredicted RBP23.97■■□□□ 1.43
LTBP4-218ENST00000597816 TRPM2O94759 1503 aa23.96■■□□□ 1.43
LTBP4-218ENST00000597816 KCNA6P17658 529 aa23.96■■□□□ 1.43
LTBP4-218ENST00000597816 SENP3Q9H4L4 574 aaPredicted RBP23.96■■□□□ 1.43
LTBP4-218ENST00000597816 STRCP1A6NGW2 1772 aa23.94■■□□□ 1.42
LTBP4-218ENST00000597816 FOXD1Q16676 465 aa23.94■■□□□ 1.42
LTBP4-218ENST00000597816 TBX22Q9Y458 520 aa23.94■■□□□ 1.42
LTBP4-218ENST00000597816 TOM1O60784 492 aa23.93■■□□□ 1.42
LTBP4-218ENST00000597816 LRRC7Q96NW7 1537 aa23.92■■□□□ 1.42
LTBP4-218ENST00000597816 CLTCL1P53675 1640 aa23.92■■□□□ 1.42
LTBP4-218ENST00000597816 RAB3GAP2Q9H2M9 1393 aa23.91■■□□□ 1.42
LTBP4-218ENST00000597816 KIF1BO60333 1816 aa23.89■■□□□ 1.41
LTBP4-218ENST00000597816 HRCP23327 699 aa23.88■■□□□ 1.41
LTBP4-218ENST00000597816 PROSER2Q86WR7 435 aaPredicted RBP23.87■■□□□ 1.41
LTBP4-218ENST00000597816 RPGRIP1LQ68CZ1 1315 aa23.84■■□□□ 1.41
LTBP4-218ENST00000597816 ADAMTS13Q76LX8 1427 aa23.84■■□□□ 1.41
LTBP4-218ENST00000597816 VGFO15240 615 aaPredicted RBP23.83■■□□□ 1.41
LTBP4-218ENST00000597816 PIP4K2BP78356 416 aa23.83■■□□□ 1.41
LTBP4-218ENST00000597816 CCDC144AA2RUR9 1427 aa23.82■■□□□ 1.4
LTBP4-218ENST00000597816 SCAF1Q9H7N4 1312 aaKnown RBP23.82■■□□□ 1.4
LTBP4-218ENST00000597816 PIK3R4Q99570 1358 aa23.81■■□□□ 1.4
LTBP4-218ENST00000597816 TMEM94Q12767 1356 aa23.8■■□□□ 1.4
LTBP4-218ENST00000597816 CHD2O14647 1828 aaKnown RBP23.8■■□□□ 1.4
LTBP4-218ENST00000597816 DIP2AQ14689 1571 aa23.8■■□□□ 1.4
LTBP4-218ENST00000597816 NEXMIFQ5QGS0 1516 aa23.79■■□□□ 1.4
LTBP4-218ENST00000597816 NKTRP30414 1462 aaKnown RBP23.78■■□□□ 1.4
LTBP4-218ENST00000597816 NWD1Q149M9 1564 aa23.78■■□□□ 1.4
LTBP4-218ENST00000597816 RBM33Q96EV2 1170 aaKnown RBP23.77■■□□□ 1.4
LTBP4-218ENST00000597816 XIRP1Q702N8 1843 aaKnown RBP23.76■■□□□ 1.39
LTBP4-218ENST00000597816 RGL3Q3MIN7 710 aa23.76■■□□□ 1.39
LTBP4-218ENST00000597816 AMOTL2Q9Y2J4 779 aa23.76■■□□□ 1.39
LTBP4-218ENST00000597816 SETBP1Q9Y6X0 1596 aa23.75■■□□□ 1.39
LTBP4-218ENST00000597816 ALKQ9UM73 1620 aa23.72■■□□□ 1.39
LTBP4-218ENST00000597816 NRXN3Q9Y4C0 1643 aa23.72■■□□□ 1.39
LTBP4-218ENST00000597816 SPATA31E1Q6ZUB1 1445 aa23.71■■□□□ 1.39
LTBP4-218ENST00000597816 PTPRUQ92729 1446 aa23.7■■□□□ 1.38
LTBP4-218ENST00000597816 NCOA3Q9Y6Q9 1424 aa23.7■■□□□ 1.38
LTBP4-218ENST00000597816 METP08581 1390 aa23.69■■□□□ 1.38
LTBP4-218ENST00000597816 MSH6P52701 1360 aa23.69■■□□□ 1.38
LTBP4-218ENST00000597816 HSPA1LP34931 641 aa23.69■■□□□ 1.38
LTBP4-218ENST00000597816 C14orf37Q86TY3 774 aa23.68■■□□□ 1.38
LTBP4-218ENST00000597816 PPLO60437 1756 aa23.68■■□□□ 1.38
LTBP4-218ENST00000597816 ANKRD30BQ9BXX2 1392 aa23.67■■□□□ 1.38
LTBP4-218ENST00000597816 ADGRF5Q8IZF2 1346 aa23.65■■□□□ 1.38
LTBP4-218ENST00000597816 C19orf44Q9H6X5 657 aa23.65■■□□□ 1.38
LTBP4-218ENST00000597816 SLAIN2Q9P270 581 aa23.63■■□□□ 1.37
LTBP4-218ENST00000597816 FAM135BQ49AJ0 1406 aa23.62■■□□□ 1.37
LTBP4-218ENST00000597816 CADPS2Q86UW7 1296 aa23.6■■□□□ 1.37
LTBP4-218ENST00000597816 ATF3P18847 181 aa23.59■■□□□ 1.37
LTBP4-218ENST00000597816 XRN1Q8IZH2 1706 aaKnown RBP23.59■■□□□ 1.37
LTBP4-218ENST00000597816 IFT172Q9UG01 1749 aa23.56■■□□□ 1.36
LTBP4-218ENST00000597816 SETD1AO15047 1707 aaKnown RBP23.55■■□□□ 1.36
LTBP4-218ENST00000597816 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.53■■□□□ 1.36
LTBP4-218ENST00000597816 C14orf93Q9H972 538 aaKnown RBP23.52■■□□□ 1.36
LTBP4-218ENST00000597816 PIK3C2GO75747 1445 aa23.51■■□□□ 1.35
LTBP4-218ENST00000597816 STAC3Q96MF2 364 aa23.51■■□□□ 1.35
LTBP4-218ENST00000597816 PTCH1Q13635 1447 aa23.5■■□□□ 1.35
LTBP4-218ENST00000597816 TRIM26Q12899 539 aaPredicted RBP23.5■■□□□ 1.35
LTBP4-218ENST00000597816 TMEM132EQ6IEE7 984 aa23.5■■□□□ 1.35
LTBP4-218ENST00000597816 DCAF11Q8TEB1 546 aa23.5■■□□□ 1.35
LTBP4-218ENST00000597816 KDM2AQ9Y2K7 1162 aa23.5■■□□□ 1.35
LTBP4-218ENST00000597816 ROBO2Q9HCK4 1378 aa23.5■■□□□ 1.35
LTBP4-218ENST00000597816 ROBO1Q9Y6N7 1651 aa23.49■■□□□ 1.35
LTBP4-218ENST00000597816 STK26Q9P289 416 aa23.49■■□□□ 1.35
LTBP4-218ENST00000597816 DCCP43146 1447 aa23.49■■□□□ 1.35
LTBP4-218ENST00000597816 PRAG1Q86YV5 1406 aa23.49■■□□□ 1.35
LTBP4-218ENST00000597816 MYOM2P54296 1465 aa23.49■■□□□ 1.35
LTBP4-218ENST00000597816 CFAP70Q5T0N1 1121 aa23.48■■□□□ 1.35
LTBP4-218ENST00000597816 DISP3Q9P2K9 1392 aa23.48■■□□□ 1.35
LTBP4-218ENST00000597816 NRXN1Q9ULB1 1477 aa23.48■■□□□ 1.35
LTBP4-218ENST00000597816 LRPPRCP42704 1394 aaKnown RBP23.47■■□□□ 1.35
LTBP4-218ENST00000597816 ADGRL3Q9HAR2 1447 aa23.47■■□□□ 1.35
LTBP4-218ENST00000597816 ABCC11Q96J66 1382 aa23.46■■□□□ 1.35
LTBP4-218ENST00000597816 SOCS7O14512 581 aa23.44■■□□□ 1.34
LTBP4-218ENST00000597816 DHX57Q6P158 1386 aaKnown RBP23.43■■□□□ 1.34
LTBP4-218ENST00000597816 WAPLQ7Z5K2 1190 aa23.42■■□□□ 1.34
LTBP4-218ENST00000597816 SIRT1Q96EB6 747 aa23.42■■□□□ 1.34
LTBP4-218ENST00000597816 TECPR2O15040 1411 aa23.42■■□□□ 1.34
LTBP4-218ENST00000597816 YTHDC2Q9H6S0 1430 aaKnown RBP23.42■■□□□ 1.34
LTBP4-218ENST00000597816 BRINP3Q76B58 766 aa23.41■■□□□ 1.34
LTBP4-218ENST00000597816 MST1RQ04912 1400 aa23.4■■□□□ 1.34
LTBP4-218ENST00000597816 ASXL1Q8IXJ9 1541 aa23.39■■□□□ 1.34
LTBP4-218ENST00000597816 NALCNQ8IZF0 1738 aa23.39■■□□□ 1.33
LTBP4-218ENST00000597816 LAMC1P11047 1609 aa23.37■■□□□ 1.33
LTBP4-218ENST00000597816 PHLPP1O60346 1717 aa23.35■■□□□ 1.33
LTBP4-218ENST00000597816 KNDC1Q76NI1 1749 aa23.33■■□□□ 1.33
LTBP4-218ENST00000597816 C1orf167Q5SNV9 1468 aa23.33■■□□□ 1.33
LTBP4-218ENST00000597816 PLEKHH1Q9ULM0 1364 aa23.33■■□□□ 1.33
LTBP4-218ENST00000597816 MED1Q15648 1581 aaPredicted RBP23.32■■□□□ 1.32
LTBP4-218ENST00000597816 ILDR2Q71H61 639 aa23.32■■□□□ 1.32
LTBP4-218ENST00000597816 SIN3AQ96ST3 1273 aa23.32■■□□□ 1.32
LTBP4-218ENST00000597816 JCADQ9P266 1359 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms