RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 RIMS2Q9UQ26 1411 aa20.6■□□□□ 0.89
MBD1-225ENST00000591535 NUTM2DQ5VT03 806 aaPredicted RBP20.6■□□□□ 0.89
MBD1-225ENST00000591535 BCANQ96GW7 911 aa20.6■□□□□ 0.89
MBD1-225ENST00000591535 RGL3Q3MIN7 710 aa20.59■□□□□ 0.89
MBD1-225ENST00000591535 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.59■□□□□ 0.89
MBD1-225ENST00000591535 SENP3Q9H4L4 574 aaPredicted RBP20.59■□□□□ 0.89
MBD1-225ENST00000591535 NPHP4O75161 1426 aaPredicted RBP20.58■□□□□ 0.88
MBD1-225ENST00000591535 NEURL4Q96JN8 1562 aa20.57■□□□□ 0.88
MBD1-225ENST00000591535 DHX57Q6P158 1386 aaKnown RBP20.57■□□□□ 0.88
MBD1-225ENST00000591535 ZFYVE9O95405 1425 aa20.56■□□□□ 0.88
MBD1-225ENST00000591535 IQGAP1P46940 1657 aa20.55■□□□□ 0.88
MBD1-225ENST00000591535 MED14O60244 1454 aa20.54■□□□□ 0.88
MBD1-225ENST00000591535 RPGRIP1LQ68CZ1 1315 aa20.53■□□□□ 0.88
MBD1-225ENST00000591535 SPATA31E1Q6ZUB1 1445 aa20.52■□□□□ 0.88
MBD1-225ENST00000591535 NEXMIFQ5QGS0 1516 aa20.5■□□□□ 0.87
MBD1-225ENST00000591535 VGFO15240 615 aaPredicted RBP20.49■□□□□ 0.87
MBD1-225ENST00000591535 SLC26A8Q96RN1 970 aa20.49■□□□□ 0.87
MBD1-225ENST00000591535 PLEKHG1Q9ULL1 1385 aa20.49■□□□□ 0.87
MBD1-225ENST00000591535 NEUROD1Q13562 356 aa20.48■□□□□ 0.87
MBD1-225ENST00000591535 SIN3AQ96ST3 1273 aa20.47■□□□□ 0.87
MBD1-225ENST00000591535 PPLO60437 1756 aa20.47■□□□□ 0.87
MBD1-225ENST00000591535 ZNF335Q9H4Z2 1342 aaPredicted RBP20.44■□□□□ 0.86
MBD1-225ENST00000591535 DCAF11Q8TEB1 546 aa20.42■□□□□ 0.86
MBD1-225ENST00000591535 KDM2AQ9Y2K7 1162 aa20.42■□□□□ 0.86
MBD1-225ENST00000591535 IFT172Q9UG01 1749 aa20.42■□□□□ 0.86
MBD1-225ENST00000591535 TBX22Q9Y458 520 aa20.41■□□□□ 0.86
MBD1-225ENST00000591535 ADGRF5Q8IZF2 1346 aa20.4■□□□□ 0.86
MBD1-225ENST00000591535 CCER1Q8TC90 406 aaPredicted RBP20.39■□□□□ 0.86
MBD1-225ENST00000591535 ADAMTS13Q76LX8 1427 aa20.39■□□□□ 0.85
MBD1-225ENST00000591535 SETBP1Q9Y6X0 1596 aa20.38■□□□□ 0.85
MBD1-225ENST00000591535 NRXN3Q9Y4C0 1643 aa20.36■□□□□ 0.85
MBD1-225ENST00000591535 DIP2AQ14689 1571 aa20.36■□□□□ 0.85
MBD1-225ENST00000591535 LTBP4Q8N2S1 1624 aa20.34■□□□□ 0.85
MBD1-225ENST00000591535 MYOM2P54296 1465 aa20.34■□□□□ 0.85
MBD1-225ENST00000591535 KCNA6P17658 529 aa20.34■□□□□ 0.85
MBD1-225ENST00000591535 STAC3Q96MF2 364 aa20.34■□□□□ 0.85
MBD1-225ENST00000591535 L3MBTL2Q969R5 705 aa20.33■□□□□ 0.84
MBD1-225ENST00000591535 STRCP1A6NGW2 1772 aa20.32■□□□□ 0.84
MBD1-225ENST00000591535 ALKQ9UM73 1620 aa20.32■□□□□ 0.84
MBD1-225ENST00000591535 CHD2O14647 1828 aaKnown RBP20.31■□□□□ 0.84
MBD1-225ENST00000591535 CERKQ8TCT0 537 aa20.31■□□□□ 0.84
MBD1-225ENST00000591535 METP08581 1390 aa20.31■□□□□ 0.84
MBD1-225ENST00000591535 PIK3C2GO75747 1445 aa20.31■□□□□ 0.84
MBD1-225ENST00000591535 TONSLQ96HA7 1378 aa20.31■□□□□ 0.84
MBD1-225ENST00000591535 PIK3R4Q99570 1358 aa20.31■□□□□ 0.84
MBD1-225ENST00000591535 CPS1P31327 1500 aa20.3■□□□□ 0.84
MBD1-225ENST00000591535 AMOTL2Q9Y2J4 779 aa20.3■□□□□ 0.84
MBD1-225ENST00000591535 CLSPNQ9HAW4 1339 aa20.29■□□□□ 0.84
MBD1-225ENST00000591535 CFAP70Q5T0N1 1121 aa20.29■□□□□ 0.84
MBD1-225ENST00000591535 NRXN1Q9ULB1 1477 aa20.29■□□□□ 0.84
MBD1-225ENST00000591535 PROSER2Q86WR7 435 aaPredicted RBP20.28■□□□□ 0.84
MBD1-225ENST00000591535 C14orf93Q9H972 538 aaKnown RBP20.27■□□□□ 0.84
MBD1-225ENST00000591535 SETD1AO15047 1707 aaKnown RBP20.27■□□□□ 0.84
MBD1-225ENST00000591535 TMEM132EQ6IEE7 984 aa20.27■□□□□ 0.83
MBD1-225ENST00000591535 NWD1Q149M9 1564 aa20.26■□□□□ 0.83
MBD1-225ENST00000591535 PTPRUQ92729 1446 aa20.25■□□□□ 0.83
MBD1-225ENST00000591535 RBM33Q96EV2 1170 aaKnown RBP20.25■□□□□ 0.83
MBD1-225ENST00000591535 STK26Q9P289 416 aa20.24■□□□□ 0.83
MBD1-225ENST00000591535 LRRC7Q96NW7 1537 aa20.24■□□□□ 0.83
MBD1-225ENST00000591535 LAMC1P11047 1609 aa20.24■□□□□ 0.83
MBD1-225ENST00000591535 NKTRP30414 1462 aaKnown RBP20.23■□□□□ 0.83
MBD1-225ENST00000591535 C14orf37Q86TY3 774 aa20.21■□□□□ 0.83
MBD1-225ENST00000591535 TMEM94Q12767 1356 aa20.21■□□□□ 0.83
MBD1-225ENST00000591535 PRAG1Q86YV5 1406 aa20.2■□□□□ 0.82
MBD1-225ENST00000591535 XRN1Q8IZH2 1706 aaKnown RBP20.2■□□□□ 0.82
MBD1-225ENST00000591535 ASXL1Q8IXJ9 1541 aa20.18■□□□□ 0.82
MBD1-225ENST00000591535 YTHDC2Q9H6S0 1430 aaKnown RBP20.18■□□□□ 0.82
MBD1-225ENST00000591535 IQSEC2Q5JU85 1478 aa20.17■□□□□ 0.82
MBD1-225ENST00000591535 LRPPRCP42704 1394 aaKnown RBP20.17■□□□□ 0.82
MBD1-225ENST00000591535 XIRP1Q702N8 1843 aaKnown RBP20.17■□□□□ 0.82
MBD1-225ENST00000591535 KIAA1210Q9ULL0 1709 aa20.15■□□□□ 0.82
MBD1-225ENST00000591535 NBPF1Q3BBV0 1214 aa20.15■□□□□ 0.82
MBD1-225ENST00000591535 TIMELESSQ9UNS1 1208 aa20.15■□□□□ 0.82
MBD1-225ENST00000591535 ABCC11Q96J66 1382 aa20.15■□□□□ 0.82
MBD1-225ENST00000591535 ROBO2Q9HCK4 1378 aa20.15■□□□□ 0.82
MBD1-225ENST00000591535 TRAK1Q9UPV9 953 aa20.14■□□□□ 0.81
MBD1-225ENST00000591535 UBAP1LF5GYI3 381 aa20.13■□□□□ 0.81
MBD1-225ENST00000591535 NBPF8Q3BBV2 869 aa20.13■□□□□ 0.81
MBD1-225ENST00000591535 ADGRB1O14514 1584 aa20.13■□□□□ 0.81
MBD1-225ENST00000591535 PTCH1Q13635 1447 aa20.13■□□□□ 0.81
MBD1-225ENST00000591535 MSH6P52701 1360 aa20.12■□□□□ 0.81
MBD1-225ENST00000591535 WAPLQ7Z5K2 1190 aa20.12■□□□□ 0.81
MBD1-225ENST00000591535 TOM1O60784 492 aa20.11■□□□□ 0.81
MBD1-225ENST00000591535 KNDC1Q76NI1 1749 aa20.11■□□□□ 0.81
MBD1-225ENST00000591535 TECPR2O15040 1411 aa20.11■□□□□ 0.81
MBD1-225ENST00000591535 NCOA3Q9Y6Q9 1424 aa20.11■□□□□ 0.81
MBD1-225ENST00000591535 C19orf44Q9H6X5 657 aa20.1■□□□□ 0.81
MBD1-225ENST00000591535 POGKQ9P215 609 aa20.1■□□□□ 0.81
MBD1-225ENST00000591535 TRPM1Q7Z4N2 1603 aa20.1■□□□□ 0.81
MBD1-225ENST00000591535 ROCK2O75116 1388 aaKnown RBP20.1■□□□□ 0.81
MBD1-225ENST00000591535 ATF3P18847 181 aa20.09■□□□□ 0.81
MBD1-225ENST00000591535 SAFB2Q14151 953 aaKnown RBP eCLIP20.09■□□□□ 0.81
MBD1-225ENST00000591535 PRAM1Q96QH2 718 aa20.09■□□□□ 0.81
MBD1-225ENST00000591535 SCAF1Q9H7N4 1312 aaKnown RBP20.08■□□□□ 0.81
MBD1-225ENST00000591535 SIRT1Q96EB6 747 aa20.08■□□□□ 0.8
MBD1-225ENST00000591535 PIP4K2BP78356 416 aa20.07■□□□□ 0.8
MBD1-225ENST00000591535 FBXO41Q8TF61 875 aa20.07■□□□□ 0.8
MBD1-225ENST00000591535 PLEKHH1Q9ULM0 1364 aa20.07■□□□□ 0.8
MBD1-225ENST00000591535 FAM135BQ49AJ0 1406 aa20.06■□□□□ 0.8
MBD1-225ENST00000591535 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms