RNA–Protein interactions for RNA: ENST00000591075.1

NPC1-211, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-211ENST00000591075 ZEB1P37275 1124 aaPredicted RBP13.01□□□□□ -0.33
NPC1-211ENST00000591075 RPRD2Q5VT52 1461 aaKnown RBP13.01□□□□□ -0.33
NPC1-211ENST00000591075 EFCAB6Q5THR3 1501 aa13.01□□□□□ -0.33
NPC1-211ENST00000591075 VWDEQ8N2E2 1590 aa13.01□□□□□ -0.33
NPC1-211ENST00000591075 SCAF11Q99590 1463 aaKnown RBP12.98□□□□□ -0.33
NPC1-211ENST00000591075 NOS1P29475 1434 aa12.98□□□□□ -0.33
NPC1-211ENST00000591075 TMEM2Q9UHN6 1383 aa12.98□□□□□ -0.33
NPC1-211ENST00000591075 UBAP1LF5GYI3 381 aa12.98□□□□□ -0.33
NPC1-211ENST00000591075 LTKP29376 864 aa12.98□□□□□ -0.33
NPC1-211ENST00000591075 POLR1AO95602 1720 aaPredicted RBP12.98□□□□□ -0.33
NPC1-211ENST00000591075 TET3O43151 1660 aa12.97□□□□□ -0.33
NPC1-211ENST00000591075 CCER1Q8TC90 406 aaPredicted RBP12.97□□□□□ -0.33
NPC1-211ENST00000591075 UNC13BO14795 1591 aa12.97□□□□□ -0.33
NPC1-211ENST00000591075 MED14O60244 1454 aa12.97□□□□□ -0.33
NPC1-211ENST00000591075 LTBP4Q8N2S1 1624 aa12.96□□□□□ -0.33
NPC1-211ENST00000591075 ABCB7O75027 752 aa12.96□□□□□ -0.33
NPC1-211ENST00000591075 UBR1Q8IWV7 1749 aa12.96□□□□□ -0.34
NPC1-211ENST00000591075 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
NPC1-211ENST00000591075 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.95□□□□□ -0.34
NPC1-211ENST00000591075 IQSEC2Q5JU85 1478 aa12.95□□□□□ -0.34
NPC1-211ENST00000591075 NEURL4Q96JN8 1562 aa12.94□□□□□ -0.34
NPC1-211ENST00000591075 IQGAP1P46940 1657 aa12.94□□□□□ -0.34
NPC1-211ENST00000591075 TOM1O60784 492 aa12.94□□□□□ -0.34
NPC1-211ENST00000591075 ZNF326Q5BKZ1 582 aaKnown RBP12.94□□□□□ -0.34
NPC1-211ENST00000591075 SLC4A1APQ9BWU0 796 aaKnown RBP12.94□□□□□ -0.34
NPC1-211ENST00000591075 SLIT1O75093 1534 aa12.93□□□□□ -0.34
NPC1-211ENST00000591075 CPS1P31327 1500 aa12.93□□□□□ -0.34
NPC1-211ENST00000591075 IQGAP3Q86VI3 1631 aa12.93□□□□□ -0.34
NPC1-211ENST00000591075 SYNMO15061 1565 aa12.93□□□□□ -0.34
NPC1-211ENST00000591075 ADGRB3O60242 1522 aa12.93□□□□□ -0.34
NPC1-211ENST00000591075 ARHGAP23Q9P227 1491 aa12.92□□□□□ -0.34
NPC1-211ENST00000591075 SLC26A8Q96RN1 970 aa12.92□□□□□ -0.34
NPC1-211ENST00000591075 KCNA4P22459 653 aa12.91□□□□□ -0.34
NPC1-211ENST00000591075 PIP4K2BP78356 416 aa12.91□□□□□ -0.34
NPC1-211ENST00000591075 TIMELESSQ9UNS1 1208 aa12.91□□□□□ -0.34
NPC1-211ENST00000591075 DHX57Q6P158 1386 aaKnown RBP12.91□□□□□ -0.34
NPC1-211ENST00000591075 RIMS2Q9UQ26 1411 aa12.9□□□□□ -0.34
NPC1-211ENST00000591075 NUTM2DQ5VT03 806 aaPredicted RBP12.9□□□□□ -0.34
NPC1-211ENST00000591075 MPHOSPH9Q99550 1183 aa12.9□□□□□ -0.34
NPC1-211ENST00000591075 E9PCH4 1651 aa12.89□□□□□ -0.35
NPC1-211ENST00000591075 KDM5AP29375 1690 aaKnown RBP12.89□□□□□ -0.35
NPC1-211ENST00000591075 RBM42Q9BTD8 480 aaKnown RBP12.89□□□□□ -0.35
NPC1-211ENST00000591075 KCNA6P17658 529 aa12.87□□□□□ -0.35
NPC1-211ENST00000591075 PROSER2Q86WR7 435 aaPredicted RBP12.87□□□□□ -0.35
NPC1-211ENST00000591075 PLEKHG1Q9ULL1 1385 aa12.86□□□□□ -0.35
NPC1-211ENST00000591075 C14orf37Q86TY3 774 aa12.85□□□□□ -0.35
NPC1-211ENST00000591075 TBX22Q9Y458 520 aa12.84□□□□□ -0.35
NPC1-211ENST00000591075 ZFYVE9O95405 1425 aa12.83□□□□□ -0.36
NPC1-211ENST00000591075 TMEM131LA2VDJ0 1609 aa12.83□□□□□ -0.36
NPC1-211ENST00000591075 LRRC7Q96NW7 1537 aa12.82□□□□□ -0.36
NPC1-211ENST00000591075 SPHKAPQ2M3C7 1700 aa12.82□□□□□ -0.36
NPC1-211ENST00000591075 VGFO15240 615 aaPredicted RBP12.81□□□□□ -0.36
NPC1-211ENST00000591075 MYO5BQ9ULV0 1848 aa12.81□□□□□ -0.36
NPC1-211ENST00000591075 TMEM94Q12767 1356 aa12.81□□□□□ -0.36
NPC1-211ENST00000591075 TRPM2O94759 1503 aa12.79□□□□□ -0.36
NPC1-211ENST00000591075 NCBP3Q53F19 620 aaKnown RBP12.79□□□□□ -0.36
NPC1-211ENST00000591075 RBM33Q96EV2 1170 aaKnown RBP12.79□□□□□ -0.36
NPC1-211ENST00000591075 MSH6P52701 1360 aa12.79□□□□□ -0.36
NPC1-211ENST00000591075 CCDC144AA2RUR9 1427 aa12.79□□□□□ -0.36
NPC1-211ENST00000591075 HSPA1LP34931 641 aa12.78□□□□□ -0.36
NPC1-211ENST00000591075 RGL3Q3MIN7 710 aa12.78□□□□□ -0.36
NPC1-211ENST00000591075 RPGRIP1LQ68CZ1 1315 aa12.78□□□□□ -0.36
NPC1-211ENST00000591075 ANKRD30BQ9BXX2 1392 aa12.78□□□□□ -0.36
NPC1-211ENST00000591075 AMOTL2Q9Y2J4 779 aa12.77□□□□□ -0.37
NPC1-211ENST00000591075 PIK3R4Q99570 1358 aa12.77□□□□□ -0.37
NPC1-211ENST00000591075 STAC3Q96MF2 364 aa12.76□□□□□ -0.37
NPC1-211ENST00000591075 ZNF219Q9P2Y4 722 aaPredicted RBP12.76□□□□□ -0.37
NPC1-211ENST00000591075 NKTRP30414 1462 aaKnown RBP12.76□□□□□ -0.37
NPC1-211ENST00000591075 CLTCL1P53675 1640 aa12.76□□□□□ -0.37
NPC1-211ENST00000591075 STRCP1A6NGW2 1772 aa12.76□□□□□ -0.37
NPC1-211ENST00000591075 KIF1BO60333 1816 aa12.76□□□□□ -0.37
NPC1-211ENST00000591075 ATF3P18847 181 aa12.75□□□□□ -0.37
NPC1-211ENST00000591075 DISP3Q9P2K9 1392 aa12.75□□□□□ -0.37
NPC1-211ENST00000591075 DIP2AQ14689 1571 aa12.74□□□□□ -0.37
NPC1-211ENST00000591075 ADAMTS13Q76LX8 1427 aa12.74□□□□□ -0.37
NPC1-211ENST00000591075 CADPS2Q86UW7 1296 aa12.72□□□□□ -0.37
NPC1-211ENST00000591075 C19orf44Q9H6X5 657 aa12.72□□□□□ -0.37
NPC1-211ENST00000591075 NPM3O75607 178 aaKnown RBP12.71□□□□□ -0.37
NPC1-211ENST00000591075 SLAIN2Q9P270 581 aa12.71□□□□□ -0.37
NPC1-211ENST00000591075 TONSLQ96HA7 1378 aa12.7□□□□□ -0.38
NPC1-211ENST00000591075 NWD1Q149M9 1564 aa12.7□□□□□ -0.38
NPC1-211ENST00000591075 NCOA3Q9Y6Q9 1424 aa12.7□□□□□ -0.38
NPC1-211ENST00000591075 CHD2O14647 1828 aaKnown RBP12.69□□□□□ -0.38
NPC1-211ENST00000591075 NEXMIFQ5QGS0 1516 aa12.69□□□□□ -0.38
NPC1-211ENST00000591075 SETBP1Q9Y6X0 1596 aa12.69□□□□□ -0.38
NPC1-211ENST00000591075 METP08581 1390 aa12.69□□□□□ -0.38
NPC1-211ENST00000591075 NEUROD1Q13562 356 aa12.68□□□□□ -0.38
NPC1-211ENST00000591075 FAM135BQ49AJ0 1406 aa12.68□□□□□ -0.38
NPC1-211ENST00000591075 SIN3AQ96ST3 1273 aa12.67□□□□□ -0.38
NPC1-211ENST00000591075 PTPRUQ92729 1446 aa12.66□□□□□ -0.38
NPC1-211ENST00000591075 ADGRF5Q8IZF2 1346 aa12.65□□□□□ -0.38
NPC1-211ENST00000591075 STK26Q9P289 416 aa12.65□□□□□ -0.38
NPC1-211ENST00000591075 XIRP1Q702N8 1843 aaKnown RBP12.65□□□□□ -0.39
NPC1-211ENST00000591075 SPATA31E1Q6ZUB1 1445 aa12.63□□□□□ -0.39
NPC1-211ENST00000591075 ALKQ9UM73 1620 aa12.63□□□□□ -0.39
NPC1-211ENST00000591075 KDM2AQ9Y2K7 1162 aa12.63□□□□□ -0.39
NPC1-211ENST00000591075 NRXN3Q9Y4C0 1643 aa12.62□□□□□ -0.39
NPC1-211ENST00000591075 TMEM132EQ6IEE7 984 aa12.61□□□□□ -0.39
NPC1-211ENST00000591075 DCAF11Q8TEB1 546 aa12.61□□□□□ -0.39
NPC1-211ENST00000591075 PPLO60437 1756 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms