RNA–Protein interactions for RNA: ENST00000590671.5

NCLN-205, Transcript of nicalin, humanhuman

TSL 2 BASIC

Gene NCLN, Length 2,070 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-205ENST00000590671 FBXO31Q5XUX0 539 aaPredicted RBP27.83■■■□□ 2.05
NCLN-205ENST00000590671 IDI1Q13907 227 aa27.82■■■□□ 2.04
NCLN-205ENST00000590671 DISP3Q9P2K9 1392 aa27.81■■■□□ 2.04
NCLN-205ENST00000590671 PRKRIP1Q9H875 184 aaPredicted RBP27.81■■■□□ 2.04
NCLN-205ENST00000590671 IQGAP1P46940 1657 aa27.8■■■□□ 2.04
NCLN-205ENST00000590671 NRXN1Q9ULB1 1477 aa27.79■■■□□ 2.04
NCLN-205ENST00000590671 PREX1Q8TCU6 1659 aa27.79■■■□□ 2.04
NCLN-205ENST00000590671 CNGB1Q14028 1251 aaPredicted RBP27.79■■■□□ 2.04
NCLN-205ENST00000590671 CCDC184Q52MB2 194 aa27.78■■■□□ 2.04
NCLN-205ENST00000590671 NUTM2DQ5VT03 806 aaPredicted RBP27.78■■■□□ 2.04
NCLN-205ENST00000590671 PPLO60437 1756 aa27.77■■■□□ 2.04
NCLN-205ENST00000590671 CLTCQ00610 1675 aaKnown RBP27.76■■■□□ 2.03
NCLN-205ENST00000590671 KIAA1210Q9ULL0 1709 aa27.75■■■□□ 2.03
NCLN-205ENST00000590671 SCAF11Q99590 1463 aaKnown RBP27.75■■■□□ 2.03
NCLN-205ENST00000590671 ERVK-7P63135 1459 aa27.71■■■□□ 2.03
NCLN-205ENST00000590671 PIK3C2GO75747 1445 aa27.71■■■□□ 2.03
NCLN-205ENST00000590671 SLC52A1Q9NWF4 448 aa27.71■■■□□ 2.03
NCLN-205ENST00000590671 TRHP20396 242 aaPredicted RBP27.69■■■□□ 2.02
NCLN-205ENST00000590671 NEXMIFQ5QGS0 1516 aa27.69■■■□□ 2.02
NCLN-205ENST00000590671 RPGRIP1LQ68CZ1 1315 aa27.69■■■□□ 2.02
NCLN-205ENST00000590671 PPP6R1Q9UPN7 881 aa27.69■■■□□ 2.02
NCLN-205ENST00000590671 MYO5BQ9ULV0 1848 aa27.68■■■□□ 2.02
NCLN-205ENST00000590671 TMF1P82094 1093 aa27.68■■■□□ 2.02
NCLN-205ENST00000590671 SENP3Q9H4L4 574 aaPredicted RBP27.68■■■□□ 2.02
NCLN-205ENST00000590671 TMEM131LA2VDJ0 1609 aa27.66■■■□□ 2.02
NCLN-205ENST00000590671 GTF3C3Q9Y5Q9 886 aa27.66■■■□□ 2.02
NCLN-205ENST00000590671 C14orf93Q9H972 538 aaKnown RBP27.65■■■□□ 2.02
NCLN-205ENST00000590671 TMEM132EQ6IEE7 984 aa27.64■■■□□ 2.01
NCLN-205ENST00000590671 ADGRB1O14514 1584 aa27.6■■■□□ 2.01
NCLN-205ENST00000590671 EIF3AQ14152 1382 aaKnown RBP27.59■■■□□ 2.01
NCLN-205ENST00000590671 VGFO15240 615 aaPredicted RBP27.59■■■□□ 2.01
NCLN-205ENST00000590671 SETBP1Q9Y6X0 1596 aa27.59■■■□□ 2.01
NCLN-205ENST00000590671 MRS2Q9HD23 443 aa27.58■■■□□ 2.01
NCLN-205ENST00000590671 SPATA31D1Q6ZQQ2 1576 aa27.58■■■□□ 2.01
NCLN-205ENST00000590671 ZMYM3Q14202 1370 aa27.58■■■□□ 2.01
NCLN-205ENST00000590671 PER1O15534 1290 aaPredicted RBP27.57■■■□□ 2
NCLN-205ENST00000590671 TRAK1Q9UPV9 953 aa27.57■■■□□ 2
NCLN-205ENST00000590671 PANK3Q9H999 370 aa27.56■■■□□ 2
NCLN-205ENST00000590671 ESF1Q9H501 851 aaKnown RBP27.55■■■□□ 2
NCLN-205ENST00000590671 STAG3Q9UJ98 1225 aa27.52■■■□□ 2
NCLN-205ENST00000590671 ZFYVE9O95405 1425 aa27.51■■□□□ 1.99
NCLN-205ENST00000590671 FAM9BQ8IZU0 186 aa27.5■■□□□ 1.99
NCLN-205ENST00000590671 A2ML1A8K2U0 1454 aa27.49■■□□□ 1.99
NCLN-205ENST00000590671 MYO3AQ8NEV4 1616 aa27.49■■□□□ 1.99
NCLN-205ENST00000590671 CENPJQ9HC77 1338 aaPredicted RBP27.48■■□□□ 1.99
NCLN-205ENST00000590671 ASXL1Q8IXJ9 1541 aa27.46■■□□□ 1.99
NCLN-205ENST00000590671 HNRNPUQ00839 825 aaKnown RBP eCLIP27.45■■□□□ 1.99
NCLN-205ENST00000590671 MYOM1P52179 1685 aa27.45■■□□□ 1.98
NCLN-205ENST00000590671 CC2D1BQ5T0F9 858 aaKnown RBP27.44■■□□□ 1.98
NCLN-205ENST00000590671 CDCA8Q53HL2 280 aa27.44■■□□□ 1.98
NCLN-205ENST00000590671 DNAJC5Q9H3Z4 198 aa27.44■■□□□ 1.98
NCLN-205ENST00000590671 KDM5AP29375 1690 aaKnown RBP27.41■■□□□ 1.98
NCLN-205ENST00000590671 PARD3Q8TEW0 1356 aa27.41■■□□□ 1.98
NCLN-205ENST00000590671 CEBPAP49715 358 aaPredicted RBP27.41■■□□□ 1.98
NCLN-205ENST00000590671 STK26Q9P289 416 aa27.41■■□□□ 1.98
NCLN-205ENST00000590671 QRICH2Q9H0J4 1663 aa27.41■■□□□ 1.98
NCLN-205ENST00000590671 KTN1Q86UP2 1357 aaKnown RBP27.41■■□□□ 1.98
NCLN-205ENST00000590671 RALBP1Q15311 655 aa27.4■■□□□ 1.98
NCLN-205ENST00000590671 SBNO2Q9Y2G9 1366 aa27.4■■□□□ 1.98
NCLN-205ENST00000590671 RIMS2Q9UQ26 1411 aa27.39■■□□□ 1.98
NCLN-205ENST00000590671 MYBBP1AQ9BQG0 1328 aaKnown RBP27.39■■□□□ 1.97
NCLN-205ENST00000590671 ARHGEF28Q8N1W1 1705 aaKnown RBP27.39■■□□□ 1.97
NCLN-205ENST00000590671 TNRQ92752 1358 aa27.38■■□□□ 1.97
NCLN-205ENST00000590671 SAFB2Q14151 953 aaKnown RBP eCLIP27.36■■□□□ 1.97
NCLN-205ENST00000590671 ALKQ9UM73 1620 aa27.36■■□□□ 1.97
NCLN-205ENST00000590671 PLPPR3Q6T4P5 718 aa27.35■■□□□ 1.97
NCLN-205ENST00000590671 TMC1Q8TDI8 760 aa27.34■■□□□ 1.97
NCLN-205ENST00000590671 PNISRQ8TF01 805 aaKnown RBP27.32■■□□□ 1.96
NCLN-205ENST00000590671 KNSTRNQ9Y448 316 aa27.32■■□□□ 1.96
NCLN-205ENST00000590671 SLC24A1O60721 1099 aa27.31■■□□□ 1.96
NCLN-205ENST00000590671 AMER1Q5JTC6 1135 aaPredicted RBP27.31■■□□□ 1.96
NCLN-205ENST00000590671 PTPRMP28827 1452 aa27.31■■□□□ 1.96
NCLN-205ENST00000590671 YTHDC2Q9H6S0 1430 aaKnown RBP27.3■■□□□ 1.96
NCLN-205ENST00000590671 BRD4O60885 1362 aaPredicted RBP27.29■■□□□ 1.96
NCLN-205ENST00000590671 CARD14Q9BXL6 1004 aa27.29■■□□□ 1.96
NCLN-205ENST00000590671 TULP4Q9NRJ4 1543 aa27.28■■□□□ 1.96
NCLN-205ENST00000590671 SENP3-EIF4A1A0A087X0R7 540 aa27.26■■□□□ 1.95
NCLN-205ENST00000590671 C3P01024 1663 aa27.26■■□□□ 1.95
NCLN-205ENST00000590671 NLRP13Q86W25 1043 aa27.26■■□□□ 1.95
NCLN-205ENST00000590671 UBR1Q8IWV7 1749 aa27.26■■□□□ 1.95
NCLN-205ENST00000590671 PRAM1Q96QH2 718 aa27.26■■□□□ 1.95
NCLN-205ENST00000590671 FER1L4A9Z1Z3 1794 aa27.25■■□□□ 1.95
NCLN-205ENST00000590671 SLC12A5Q9H2X9 1139 aa27.25■■□□□ 1.95
NCLN-205ENST00000590671 NRXN3Q9Y4C0 1643 aa27.25■■□□□ 1.95
NCLN-205ENST00000590671 SETD1AO15047 1707 aaKnown RBP27.25■■□□□ 1.95
NCLN-205ENST00000590671 CABP2Q9NPB3 220 aa27.22■■□□□ 1.95
NCLN-205ENST00000590671 TMEM2Q9UHN6 1383 aa27.22■■□□□ 1.95
NCLN-205ENST00000590671 EVC2Q86UK5 1308 aa27.21■■□□□ 1.95
NCLN-205ENST00000590671 MINK1Q8N4C8 1332 aaPredicted RBP27.2■■□□□ 1.95
NCLN-205ENST00000590671 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.2■■□□□ 1.95
NCLN-205ENST00000590671 POGKQ9P215 609 aa27.19■■□□□ 1.94
NCLN-205ENST00000590671 METP08581 1390 aa27.19■■□□□ 1.94
NCLN-205ENST00000590671 LRPPRCP42704 1394 aaKnown RBP27.19■■□□□ 1.94
NCLN-205ENST00000590671 WAPLQ7Z5K2 1190 aa27.17■■□□□ 1.94
NCLN-205ENST00000590671 LTKP29376 864 aa27.17■■□□□ 1.94
NCLN-205ENST00000590671 ZBED9Q6R2W3 1325 aa27.16■■□□□ 1.94
NCLN-205ENST00000590671 NLRP1Q9C000 1473 aa27.16■■□□□ 1.94
NCLN-205ENST00000590671 PLEKHH1Q9ULM0 1364 aa27.16■■□□□ 1.94
NCLN-205ENST00000590671 PPP2R1AP30153 589 aa27.15■■□□□ 1.94
NCLN-205ENST00000590671 BCANQ96GW7 911 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms