RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 RIMS2Q9UQ26 1411 aa17.52■□□□□ 0.4
APOC1-206ENST00000590334 MED14O60244 1454 aa17.5■□□□□ 0.39
APOC1-206ENST00000590334 MYOM2P54296 1465 aa17.5■□□□□ 0.39
APOC1-206ENST00000590334 SCAF11Q99590 1463 aaKnown RBP17.5■□□□□ 0.39
APOC1-206ENST00000590334 NEUROD1Q13562 356 aa17.49■□□□□ 0.39
APOC1-206ENST00000590334 ZNF326Q5BKZ1 582 aaKnown RBP17.49■□□□□ 0.39
APOC1-206ENST00000590334 IQGAP1P46940 1657 aa17.48■□□□□ 0.39
APOC1-206ENST00000590334 HSPA2P54652 639 aa17.48■□□□□ 0.39
APOC1-206ENST00000590334 RGL3Q3MIN7 710 aa17.48■□□□□ 0.39
APOC1-206ENST00000590334 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.48■□□□□ 0.39
APOC1-206ENST00000590334 LTKP29376 864 aa17.47■□□□□ 0.39
APOC1-206ENST00000590334 HDGFP51858 240 aaKnown RBP17.47■□□□□ 0.39
APOC1-206ENST00000590334 STAC3Q96MF2 364 aa17.47■□□□□ 0.39
APOC1-206ENST00000590334 NRXN1Q9ULB1 1477 aa17.47■□□□□ 0.39
APOC1-206ENST00000590334 NRXN3Q9Y4C0 1643 aa17.47■□□□□ 0.39
APOC1-206ENST00000590334 SETBP1Q9Y6X0 1596 aa17.46■□□□□ 0.39
APOC1-206ENST00000590334 ANKLE2Q86XL3 938 aa17.46■□□□□ 0.39
APOC1-206ENST00000590334 EID1Q9Y6B2 187 aa17.46■□□□□ 0.39
APOC1-206ENST00000590334 SETD1AO15047 1707 aaKnown RBP17.45■□□□□ 0.38
APOC1-206ENST00000590334 TIMELESSQ9UNS1 1208 aa17.45■□□□□ 0.38
APOC1-206ENST00000590334 LAMC1P11047 1609 aa17.44■□□□□ 0.38
APOC1-206ENST00000590334 TONSLQ96HA7 1378 aa17.44■□□□□ 0.38
APOC1-206ENST00000590334 PLEKHG1Q9ULL1 1385 aa17.44■□□□□ 0.38
APOC1-206ENST00000590334 VGFO15240 615 aaPredicted RBP17.44■□□□□ 0.38
APOC1-206ENST00000590334 TXNDC2Q86VQ3 553 aa17.44■□□□□ 0.38
APOC1-206ENST00000590334 L3MBTL2Q969R5 705 aa17.44■□□□□ 0.38
APOC1-206ENST00000590334 KIAA1210Q9ULL0 1709 aa17.44■□□□□ 0.38
APOC1-206ENST00000590334 DIP2AQ14689 1571 aa17.42■□□□□ 0.38
APOC1-206ENST00000590334 DCAF11Q8TEB1 546 aa17.42■□□□□ 0.38
APOC1-206ENST00000590334 NCKAP5LQ9HCH0 1330 aa17.42■□□□□ 0.38
APOC1-206ENST00000590334 NPHP4O75161 1426 aaPredicted RBP17.41■□□□□ 0.38
APOC1-206ENST00000590334 PIK3C2GO75747 1445 aa17.41■□□□□ 0.38
APOC1-206ENST00000590334 ADGRF5Q8IZF2 1346 aa17.4■□□□□ 0.38
APOC1-206ENST00000590334 PPP1R15AO75807 674 aaPredicted RBP17.39■□□□□ 0.37
APOC1-206ENST00000590334 NUTM2DQ5VT03 806 aaPredicted RBP17.39■□□□□ 0.37
APOC1-206ENST00000590334 TRPM1Q7Z4N2 1603 aa17.39■□□□□ 0.37
APOC1-206ENST00000590334 ALKQ9UM73 1620 aa17.39■□□□□ 0.37
APOC1-206ENST00000590334 PRAG1Q86YV5 1406 aa17.38■□□□□ 0.37
APOC1-206ENST00000590334 ADAMTS13Q76LX8 1427 aa17.38■□□□□ 0.37
APOC1-206ENST00000590334 CHD2O14647 1828 aaKnown RBP17.36■□□□□ 0.37
APOC1-206ENST00000590334 KDM2AQ9Y2K7 1162 aa17.36■□□□□ 0.37
APOC1-206ENST00000590334 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
APOC1-206ENST00000590334 TBX22Q9Y458 520 aa17.33■□□□□ 0.36
APOC1-206ENST00000590334 ASXL1Q8IXJ9 1541 aa17.31■□□□□ 0.36
APOC1-206ENST00000590334 KNDC1Q76NI1 1749 aa17.31■□□□□ 0.36
APOC1-206ENST00000590334 C14orf93Q9H972 538 aaKnown RBP17.31■□□□□ 0.36
APOC1-206ENST00000590334 ADGRB1O14514 1584 aa17.31■□□□□ 0.36
APOC1-206ENST00000590334 NWD1Q149M9 1564 aa17.31■□□□□ 0.36
APOC1-206ENST00000590334 STRCP1A6NGW2 1772 aa17.3■□□□□ 0.36
APOC1-206ENST00000590334 XRN1Q8IZH2 1706 aaKnown RBP17.3■□□□□ 0.36
APOC1-206ENST00000590334 PIK3R4Q99570 1358 aa17.3■□□□□ 0.36
APOC1-206ENST00000590334 NBPF8Q3BBV2 869 aa17.29■□□□□ 0.36
APOC1-206ENST00000590334 BCANQ96GW7 911 aa17.29■□□□□ 0.36
APOC1-206ENST00000590334 SLC26A8Q96RN1 970 aa17.29■□□□□ 0.36
APOC1-206ENST00000590334 RALGAPBQ86X10 1494 aa17.29■□□□□ 0.36
APOC1-206ENST00000590334 CFAP70Q5T0N1 1121 aa17.28■□□□□ 0.36
APOC1-206ENST00000590334 METP08581 1390 aa17.28■□□□□ 0.36
APOC1-206ENST00000590334 SENP3Q9H4L4 574 aaPredicted RBP17.26■□□□□ 0.35
APOC1-206ENST00000590334 PTPRUQ92729 1446 aa17.25■□□□□ 0.35
APOC1-206ENST00000590334 ARHGEF28Q8N1W1 1705 aaKnown RBP17.24■□□□□ 0.35
APOC1-206ENST00000590334 GPRASP1Q5JY77 1395 aa17.24■□□□□ 0.35
APOC1-206ENST00000590334 CPS1P31327 1500 aa17.23■□□□□ 0.35
APOC1-206ENST00000590334 TECPR2O15040 1411 aa17.22■□□□□ 0.35
APOC1-206ENST00000590334 YTHDC2Q9H6S0 1430 aaKnown RBP17.22■□□□□ 0.35
APOC1-206ENST00000590334 NKTRP30414 1462 aaKnown RBP17.22■□□□□ 0.35
APOC1-206ENST00000590334 DLC1Q96QB1 1528 aa17.21■□□□□ 0.35
APOC1-206ENST00000590334 XIRP1Q702N8 1843 aaKnown RBP17.21■□□□□ 0.35
APOC1-206ENST00000590334 LRPPRCP42704 1394 aaKnown RBP17.21■□□□□ 0.35
APOC1-206ENST00000590334 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
APOC1-206ENST00000590334 NBPF1Q3BBV0 1214 aa17.21■□□□□ 0.35
APOC1-206ENST00000590334 ROCK2O75116 1388 aaKnown RBP17.2■□□□□ 0.34
APOC1-206ENST00000590334 ABCC11Q96J66 1382 aa17.2■□□□□ 0.34
APOC1-206ENST00000590334 KCNA6P17658 529 aa17.2■□□□□ 0.34
APOC1-206ENST00000590334 TMEM132EQ6IEE7 984 aa17.2■□□□□ 0.34
APOC1-206ENST00000590334 LTBP4Q8N2S1 1624 aa17.2■□□□□ 0.34
APOC1-206ENST00000590334 PTCH1Q13635 1447 aa17.19■□□□□ 0.34
APOC1-206ENST00000590334 AMOTL2Q9Y2J4 779 aa17.18■□□□□ 0.34
APOC1-206ENST00000590334 ZNF335Q9H4Z2 1342 aaPredicted RBP17.18■□□□□ 0.34
APOC1-206ENST00000590334 FAM135BQ49AJ0 1406 aa17.16■□□□□ 0.34
APOC1-206ENST00000590334 SIRT1Q96EB6 747 aa17.16■□□□□ 0.34
APOC1-206ENST00000590334 QRICH2Q9H0J4 1663 aa17.15■□□□□ 0.34
APOC1-206ENST00000590334 NALCNQ8IZF0 1738 aa17.14■□□□□ 0.33
APOC1-206ENST00000590334 LRRC7Q96NW7 1537 aa17.14■□□□□ 0.33
APOC1-206ENST00000590334 ROBO2Q9HCK4 1378 aa17.14■□□□□ 0.33
APOC1-206ENST00000590334 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.13■□□□□ 0.33
APOC1-206ENST00000590334 CARD11Q9BXL7 1154 aa17.13■□□□□ 0.33
APOC1-206ENST00000590334 NCOA3Q9Y6Q9 1424 aa17.13■□□□□ 0.33
APOC1-206ENST00000590334 STK26Q9P289 416 aa17.12■□□□□ 0.33
APOC1-206ENST00000590334 TRAK1Q9UPV9 953 aa17.11■□□□□ 0.33
APOC1-206ENST00000590334 ADGRB2O60241 1585 aa17.1■□□□□ 0.33
APOC1-206ENST00000590334 EIF3AQ14152 1382 aaKnown RBP17.09■□□□□ 0.33
APOC1-206ENST00000590334 PROSER2Q86WR7 435 aaPredicted RBP17.08■□□□□ 0.32
APOC1-206ENST00000590334 IQSEC2Q5JU85 1478 aa17.07■□□□□ 0.32
APOC1-206ENST00000590334 USP47Q96K76 1375 aa17.07■□□□□ 0.32
APOC1-206ENST00000590334 PLEKHH1Q9ULM0 1364 aa17.07■□□□□ 0.32
APOC1-206ENST00000590334 PRAM1Q96QH2 718 aa17.07■□□□□ 0.32
APOC1-206ENST00000590334 TMEM94Q12767 1356 aa17.06■□□□□ 0.32
APOC1-206ENST00000590334 WAPLQ7Z5K2 1190 aa17.06■□□□□ 0.32
APOC1-206ENST00000590334 CDC42BPGQ6DT37 1551 aa17.06■□□□□ 0.32
APOC1-206ENST00000590334 ADGRL3Q9HAR2 1447 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms