RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 ZNF326Q5BKZ1 582 aaKnown RBP32.82■■■□□ 2.84
R3HDM4-205ENST00000589445 IQGAP1P46940 1657 aa32.82■■■□□ 2.84
R3HDM4-205ENST00000589445 PPLO60437 1756 aa32.81■■■□□ 2.84
R3HDM4-205ENST00000589445 RIMS2Q9UQ26 1411 aa32.81■■■□□ 2.84
R3HDM4-205ENST00000589445 IFT172Q9UG01 1749 aa32.8■■■□□ 2.84
R3HDM4-205ENST00000589445 NEXMIFQ5QGS0 1516 aa32.8■■■□□ 2.84
R3HDM4-205ENST00000589445 NCKAP5LQ9HCH0 1330 aa32.78■■■□□ 2.84
R3HDM4-205ENST00000589445 ZFYVE9O95405 1425 aa32.78■■■□□ 2.84
R3HDM4-205ENST00000589445 SPATA31E1Q6ZUB1 1445 aa32.77■■■□□ 2.84
R3HDM4-205ENST00000589445 ANKLE2Q86XL3 938 aa32.75■■■□□ 2.83
R3HDM4-205ENST00000589445 EID1Q9Y6B2 187 aa32.75■■■□□ 2.83
R3HDM4-205ENST00000589445 PPP1R15AO75807 674 aaPredicted RBP32.73■■■□□ 2.83
R3HDM4-205ENST00000589445 TXNDC2Q86VQ3 553 aa32.72■■■□□ 2.83
R3HDM4-205ENST00000589445 NPHP4O75161 1426 aaPredicted RBP32.71■■■□□ 2.83
R3HDM4-205ENST00000589445 RGL3Q3MIN7 710 aa32.7■■■□□ 2.83
R3HDM4-205ENST00000589445 NUTM2DQ5VT03 806 aaPredicted RBP32.7■■■□□ 2.83
R3HDM4-205ENST00000589445 IQSEC2Q5JU85 1478 aa32.69■■■□□ 2.82
R3HDM4-205ENST00000589445 LTKP29376 864 aa32.68■■■□□ 2.82
R3HDM4-205ENST00000589445 SENP3Q9H4L4 574 aaPredicted RBP32.68■■■□□ 2.82
R3HDM4-205ENST00000589445 MED14O60244 1454 aa32.67■■■□□ 2.82
R3HDM4-205ENST00000589445 LTBP4Q8N2S1 1624 aa32.67■■■□□ 2.82
R3HDM4-205ENST00000589445 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.65■■■□□ 2.82
R3HDM4-205ENST00000589445 HDGFP51858 240 aaKnown RBP32.63■■■□□ 2.81
R3HDM4-205ENST00000589445 PLEKHG1Q9ULL1 1385 aa32.61■■■□□ 2.81
R3HDM4-205ENST00000589445 BCANQ96GW7 911 aa32.61■■■□□ 2.81
R3HDM4-205ENST00000589445 SIN3AQ96ST3 1273 aa32.61■■■□□ 2.81
R3HDM4-205ENST00000589445 NRXN3Q9Y4C0 1643 aa32.61■■■□□ 2.81
R3HDM4-205ENST00000589445 NEUROD1Q13562 356 aa32.6■■■□□ 2.81
R3HDM4-205ENST00000589445 CCER1Q8TC90 406 aaPredicted RBP32.6■■■□□ 2.81
R3HDM4-205ENST00000589445 RPGRIP1LQ68CZ1 1315 aa32.59■■■□□ 2.81
R3HDM4-205ENST00000589445 SETBP1Q9Y6X0 1596 aa32.58■■■□□ 2.81
R3HDM4-205ENST00000589445 MYOM2P54296 1465 aa32.57■■■□□ 2.8
R3HDM4-205ENST00000589445 DIP2AQ14689 1571 aa32.57■■■□□ 2.8
R3HDM4-205ENST00000589445 SETD1AO15047 1707 aaKnown RBP32.51■■■□□ 2.79
R3HDM4-205ENST00000589445 VGFO15240 615 aaPredicted RBP32.5■■■□□ 2.79
R3HDM4-205ENST00000589445 LAMC1P11047 1609 aa32.49■■■□□ 2.79
R3HDM4-205ENST00000589445 SLC26A8Q96RN1 970 aa32.48■■■□□ 2.79
R3HDM4-205ENST00000589445 TONSLQ96HA7 1378 aa32.47■■■□□ 2.79
R3HDM4-205ENST00000589445 ADAMTS13Q76LX8 1427 aa32.47■■■□□ 2.79
R3HDM4-205ENST00000589445 DCAF11Q8TEB1 546 aa32.47■■■□□ 2.79
R3HDM4-205ENST00000589445 ADGRF5Q8IZF2 1346 aa32.47■■■□□ 2.79
R3HDM4-205ENST00000589445 PIK3C2GO75747 1445 aa32.45■■■□□ 2.79
R3HDM4-205ENST00000589445 ALKQ9UM73 1620 aa32.45■■■□□ 2.79
R3HDM4-205ENST00000589445 KDM2AQ9Y2K7 1162 aa32.45■■■□□ 2.79
R3HDM4-205ENST00000589445 CLSPNQ9HAW4 1339 aa32.45■■■□□ 2.78
R3HDM4-205ENST00000589445 NRXN1Q9ULB1 1477 aa32.44■■■□□ 2.78
R3HDM4-205ENST00000589445 STRCP1A6NGW2 1772 aa32.44■■■□□ 2.78
R3HDM4-205ENST00000589445 ZNF335Q9H4Z2 1342 aaPredicted RBP32.4■■■□□ 2.78
R3HDM4-205ENST00000589445 NWD1Q149M9 1564 aa32.4■■■□□ 2.78
R3HDM4-205ENST00000589445 CHD2O14647 1828 aaKnown RBP32.4■■■□□ 2.78
R3HDM4-205ENST00000589445 UBAP1LF5GYI3 381 aa32.39■■■□□ 2.78
R3HDM4-205ENST00000589445 L3MBTL2Q969R5 705 aa32.37■■■□□ 2.77
R3HDM4-205ENST00000589445 XRN1Q8IZH2 1706 aaKnown RBP32.34■■■□□ 2.77
R3HDM4-205ENST00000589445 ASXL1Q8IXJ9 1541 aa32.34■■■□□ 2.77
R3HDM4-205ENST00000589445 KIAA1210Q9ULL0 1709 aa32.32■■■□□ 2.76
R3HDM4-205ENST00000589445 TBX22Q9Y458 520 aa32.32■■■□□ 2.76
R3HDM4-205ENST00000589445 PRAG1Q86YV5 1406 aa32.32■■■□□ 2.76
R3HDM4-205ENST00000589445 METP08581 1390 aa32.31■■■□□ 2.76
R3HDM4-205ENST00000589445 CPS1P31327 1500 aa32.31■■■□□ 2.76
R3HDM4-205ENST00000589445 STAC3Q96MF2 364 aa32.28■■■□□ 2.76
R3HDM4-205ENST00000589445 TRPM1Q7Z4N2 1603 aa32.28■■■□□ 2.76
R3HDM4-205ENST00000589445 PIK3R4Q99570 1358 aa32.28■■■□□ 2.76
R3HDM4-205ENST00000589445 NKTRP30414 1462 aaKnown RBP32.28■■■□□ 2.76
R3HDM4-205ENST00000589445 KNDC1Q76NI1 1749 aa32.26■■■□□ 2.76
R3HDM4-205ENST00000589445 PTPRUQ92729 1446 aa32.26■■■□□ 2.75
R3HDM4-205ENST00000589445 CFAP70Q5T0N1 1121 aa32.24■■■□□ 2.75
R3HDM4-205ENST00000589445 ADGRB1O14514 1584 aa32.21■■■□□ 2.75
R3HDM4-205ENST00000589445 XIRP1Q702N8 1843 aaKnown RBP32.21■■■□□ 2.75
R3HDM4-205ENST00000589445 MED1Q15648 1581 aaPredicted RBP32.2■■■□□ 2.75
R3HDM4-205ENST00000589445 KCNA6P17658 529 aa32.2■■■□□ 2.75
R3HDM4-205ENST00000589445 C14orf93Q9H972 538 aaKnown RBP32.19■■■□□ 2.74
R3HDM4-205ENST00000589445 LRRC7Q96NW7 1537 aa32.17■■■□□ 2.74
R3HDM4-205ENST00000589445 TMEM132EQ6IEE7 984 aa32.17■■■□□ 2.74
R3HDM4-205ENST00000589445 AMOTL2Q9Y2J4 779 aa32.16■■■□□ 2.74
R3HDM4-205ENST00000589445 YTHDC2Q9H6S0 1430 aaKnown RBP32.16■■■□□ 2.74
R3HDM4-205ENST00000589445 STK26Q9P289 416 aa32.14■■■□□ 2.74
R3HDM4-205ENST00000589445 LRPPRCP42704 1394 aaKnown RBP32.13■■■□□ 2.73
R3HDM4-205ENST00000589445 PTCH1Q13635 1447 aa32.13■■■□□ 2.73
R3HDM4-205ENST00000589445 ARHGEF28Q8N1W1 1705 aaKnown RBP32.13■■■□□ 2.73
R3HDM4-205ENST00000589445 RALGAPBQ86X10 1494 aa32.11■■■□□ 2.73
R3HDM4-205ENST00000589445 SCAF1Q9H7N4 1312 aaKnown RBP32.11■■■□□ 2.73
R3HDM4-205ENST00000589445 NALCNQ8IZF0 1738 aa32.11■■■□□ 2.73
R3HDM4-205ENST00000589445 HSPA1LP34931 641 aa32.09■■■□□ 2.73
R3HDM4-205ENST00000589445 NBPF8Q3BBV2 869 aa32.09■■■□□ 2.73
R3HDM4-205ENST00000589445 PROSER2Q86WR7 435 aaPredicted RBP32.09■■■□□ 2.73
R3HDM4-205ENST00000589445 ROCK2O75116 1388 aaKnown RBP32.08■■■□□ 2.73
R3HDM4-205ENST00000589445 TMEM94Q12767 1356 aa32.08■■■□□ 2.73
R3HDM4-205ENST00000589445 TIMELESSQ9UNS1 1208 aa32.08■■■□□ 2.73
R3HDM4-205ENST00000589445 TECPR2O15040 1411 aa32.08■■■□□ 2.73
R3HDM4-205ENST00000589445 RBM33Q96EV2 1170 aaKnown RBP32.07■■■□□ 2.72
R3HDM4-205ENST00000589445 ROBO2Q9HCK4 1378 aa32.07■■■□□ 2.72
R3HDM4-205ENST00000589445 DLC1Q96QB1 1528 aa32.05■■■□□ 2.72
R3HDM4-205ENST00000589445 PIP4K2BP78356 416 aa32.04■■■□□ 2.72
R3HDM4-205ENST00000589445 NBPF1Q3BBV0 1214 aa32.04■■■□□ 2.72
R3HDM4-205ENST00000589445 C14orf37Q86TY3 774 aa32.03■■■□□ 2.72
R3HDM4-205ENST00000589445 ABCC11Q96J66 1382 aa32.02■■■□□ 2.72
R3HDM4-205ENST00000589445 TOM1O60784 492 aa32.01■■■□□ 2.71
R3HDM4-205ENST00000589445 TRAK1Q9UPV9 953 aa32■■■□□ 2.71
R3HDM4-205ENST00000589445 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.99■■■□□ 2.71
R3HDM4-205ENST00000589445 PHF23Q9BUL5 403 aaPredicted RBP31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms