RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 WASHC2CQ9Y4E1 1318 aa20.77■□□□□ 0.92
MBD1-217ENST00000588937 ABCC3O15438 1527 aa20.77■□□□□ 0.92
MBD1-217ENST00000588937 MYBBP1AQ9BQG0 1328 aaKnown RBP20.76■□□□□ 0.91
MBD1-217ENST00000588937 DISP3Q9P2K9 1392 aa20.75■□□□□ 0.91
MBD1-217ENST00000588937 IFT172Q9UG01 1749 aa20.75■□□□□ 0.91
MBD1-217ENST00000588937 PPP6R1Q9UPN7 881 aa20.75■□□□□ 0.91
MBD1-217ENST00000588937 BRD4O60885 1362 aaPredicted RBP20.75■□□□□ 0.91
MBD1-217ENST00000588937 EIF3AQ14152 1382 aaKnown RBP20.75■□□□□ 0.91
MBD1-217ENST00000588937 SLC24A1O60721 1099 aa20.74■□□□□ 0.91
MBD1-217ENST00000588937 CDCA8Q53HL2 280 aa20.74■□□□□ 0.91
MBD1-217ENST00000588937 TMC1Q8TDI8 760 aa20.74■□□□□ 0.91
MBD1-217ENST00000588937 ARHGAP31Q2M1Z3 1444 aa20.73■□□□□ 0.91
MBD1-217ENST00000588937 UGGT1Q9NYU2 1555 aa20.73■□□□□ 0.91
MBD1-217ENST00000588937 GGT6Q6P531 493 aa20.72■□□□□ 0.91
MBD1-217ENST00000588937 CAMSAP1Q5T5Y3 1602 aa20.72■□□□□ 0.91
MBD1-217ENST00000588937 CNGB1Q14028 1251 aaPredicted RBP20.72■□□□□ 0.91
MBD1-217ENST00000588937 NPATQ14207 1427 aa20.71■□□□□ 0.91
MBD1-217ENST00000588937 ADGRB3O60242 1522 aa20.71■□□□□ 0.91
MBD1-217ENST00000588937 SIGLEC1Q9BZZ2 1709 aa20.71■□□□□ 0.91
MBD1-217ENST00000588937 MROH2AA6NES4 1674 aa20.71■□□□□ 0.91
MBD1-217ENST00000588937 PARD3Q8TEW0 1356 aa20.7■□□□□ 0.9
MBD1-217ENST00000588937 PER1O15534 1290 aaPredicted RBP20.69■□□□□ 0.9
MBD1-217ENST00000588937 PNISRQ8TF01 805 aaKnown RBP20.69■□□□□ 0.9
MBD1-217ENST00000588937 NRXN1Q9ULB1 1477 aa20.68■□□□□ 0.9
MBD1-217ENST00000588937 NLRP13Q86W25 1043 aa20.67■□□□□ 0.9
MBD1-217ENST00000588937 PANK3Q9H999 370 aa20.66■□□□□ 0.9
MBD1-217ENST00000588937 RPGRIP1LQ68CZ1 1315 aa20.65■□□□□ 0.9
MBD1-217ENST00000588937 NOS1P29475 1434 aa20.64■□□□□ 0.9
MBD1-217ENST00000588937 SYNMO15061 1565 aa20.64■□□□□ 0.9
MBD1-217ENST00000588937 PPLO60437 1756 aa20.64■□□□□ 0.89
MBD1-217ENST00000588937 SETBP1Q9Y6X0 1596 aa20.64■□□□□ 0.89
MBD1-217ENST00000588937 LRPPRCP42704 1394 aaKnown RBP20.63■□□□□ 0.89
MBD1-217ENST00000588937 ADGRF5Q8IZF2 1346 aa20.63■□□□□ 0.89
MBD1-217ENST00000588937 CFAP70Q5T0N1 1121 aa20.62■□□□□ 0.89
MBD1-217ENST00000588937 ERICH6BQ5W0A0 696 aa20.62■□□□□ 0.89
MBD1-217ENST00000588937 CFAP65Q6ZU64 1925 aaKnown RBP20.61■□□□□ 0.89
MBD1-217ENST00000588937 CHGAP10645 457 aaKnown RBP20.61■□□□□ 0.89
MBD1-217ENST00000588937 KDM5AP29375 1690 aaKnown RBP20.61■□□□□ 0.89
MBD1-217ENST00000588937 BCANQ96GW7 911 aa20.6■□□□□ 0.89
MBD1-217ENST00000588937 PIK3C2BO00750 1634 aa20.6■□□□□ 0.89
MBD1-217ENST00000588937 MYO3AQ8NEV4 1616 aa20.59■□□□□ 0.89
MBD1-217ENST00000588937 SMG6Q86US8 1419 aaKnown RBP20.58■□□□□ 0.88
MBD1-217ENST00000588937 PREX1Q8TCU6 1659 aa20.57■□□□□ 0.88
MBD1-217ENST00000588937 PIK3C2GO75747 1445 aa20.57■□□□□ 0.88
MBD1-217ENST00000588937 KNSTRNQ9Y448 316 aa20.57■□□□□ 0.88
MBD1-217ENST00000588937 SBNO2Q9Y2G9 1366 aa20.56■□□□□ 0.88
MBD1-217ENST00000588937 CLTCQ00610 1675 aaKnown RBP20.56■□□□□ 0.88
MBD1-217ENST00000588937 CC2D1BQ5T0F9 858 aaKnown RBP20.56■□□□□ 0.88
MBD1-217ENST00000588937 INSRP06213 1382 aa20.55■□□□□ 0.88
MBD1-217ENST00000588937 MYOM1P52179 1685 aa20.54■□□□□ 0.88
MBD1-217ENST00000588937 C14orf93Q9H972 538 aaKnown RBP20.54■□□□□ 0.88
MBD1-217ENST00000588937 SLC52A1Q9NWF4 448 aa20.53■□□□□ 0.88
MBD1-217ENST00000588937 NUDCQ9Y266 331 aa20.53■□□□□ 0.88
MBD1-217ENST00000588937 ERVK-7P63135 1459 aa20.51■□□□□ 0.87
MBD1-217ENST00000588937 ASXL1Q8IXJ9 1541 aa20.51■□□□□ 0.87
MBD1-217ENST00000588937 NPC1L1Q9UHC9 1359 aa20.51■□□□□ 0.87
MBD1-217ENST00000588937 VGFO15240 615 aaPredicted RBP20.51■□□□□ 0.87
MBD1-217ENST00000588937 SPATA31D1Q6ZQQ2 1576 aa20.5■□□□□ 0.87
MBD1-217ENST00000588937 CENPJQ9HC77 1338 aaPredicted RBP20.49■□□□□ 0.87
MBD1-217ENST00000588937 NEXMIFQ5QGS0 1516 aa20.49■□□□□ 0.87
MBD1-217ENST00000588937 ADGRB1O14514 1584 aa20.49■□□□□ 0.87
MBD1-217ENST00000588937 AMER1Q5JTC6 1135 aaPredicted RBP20.47■□□□□ 0.87
MBD1-217ENST00000588937 ZFYVE9O95405 1425 aa20.46■□□□□ 0.87
MBD1-217ENST00000588937 QRICH2Q9H0J4 1663 aa20.45■□□□□ 0.86
MBD1-217ENST00000588937 ZMYM3Q14202 1370 aa20.45■□□□□ 0.86
MBD1-217ENST00000588937 IDI1Q13907 227 aa20.44■□□□□ 0.86
MBD1-217ENST00000588937 PDE3BQ13370 1112 aa20.44■□□□□ 0.86
MBD1-217ENST00000588937 BLMP54132 1417 aaPredicted RBP20.43■□□□□ 0.86
MBD1-217ENST00000588937 MLECQ14165 292 aa20.43■□□□□ 0.86
MBD1-217ENST00000588937 PPP4R2Q9NY27 417 aa20.43■□□□□ 0.86
MBD1-217ENST00000588937 IRX6P78412 446 aaPredicted RBP20.42■□□□□ 0.86
MBD1-217ENST00000588937 TRAK1Q9UPV9 953 aa20.42■□□□□ 0.86
MBD1-217ENST00000588937 TMEM131LA2VDJ0 1609 aa20.42■□□□□ 0.86
MBD1-217ENST00000588937 PPP2R1AP30153 589 aa20.41■□□□□ 0.86
MBD1-217ENST00000588937 ESF1Q9H501 851 aaKnown RBP20.41■□□□□ 0.86
MBD1-217ENST00000588937 FBXO31Q5XUX0 539 aaPredicted RBP20.4■□□□□ 0.86
MBD1-217ENST00000588937 RNF123Q5XPI4 1314 aa20.39■□□□□ 0.85
MBD1-217ENST00000588937 PUS7Q96PZ0 661 aaKnown RBP20.39■□□□□ 0.85
MBD1-217ENST00000588937 FER1L4A9Z1Z3 1794 aa20.38■□□□□ 0.85
MBD1-217ENST00000588937 MYO5BQ9ULV0 1848 aa20.38■□□□□ 0.85
MBD1-217ENST00000588937 TSHZ2Q9NRE2 1034 aa20.38■□□□□ 0.85
MBD1-217ENST00000588937 ARHGEF28Q8N1W1 1705 aaKnown RBP20.38■□□□□ 0.85
MBD1-217ENST00000588937 TMEM132EQ6IEE7 984 aa20.37■□□□□ 0.85
MBD1-217ENST00000588937 WDR43Q15061 677 aaKnown RBP eCLIP20.35■□□□□ 0.85
MBD1-217ENST00000588937 C3P01024 1663 aa20.33■□□□□ 0.85
MBD1-217ENST00000588937 EVC2Q86UK5 1308 aa20.33■□□□□ 0.84
MBD1-217ENST00000588937 NUTM2DQ5VT03 806 aaPredicted RBP20.32■□□□□ 0.84
MBD1-217ENST00000588937 CARD14Q9BXL6 1004 aa20.31■□□□□ 0.84
MBD1-217ENST00000588937 A2ML1A8K2U0 1454 aa20.3■□□□□ 0.84
MBD1-217ENST00000588937 ADAMTSL3P82987 1691 aa20.3■□□□□ 0.84
MBD1-217ENST00000588937 STAG3Q9UJ98 1225 aa20.3■□□□□ 0.84
MBD1-217ENST00000588937 ADAMTS8Q9UP79 889 aa20.3■□□□□ 0.84
MBD1-217ENST00000588937 USP32Q8NFA0 1604 aa20.3■□□□□ 0.84
MBD1-217ENST00000588937 TNRQ92752 1358 aa20.3■□□□□ 0.84
MBD1-217ENST00000588937 SENP3-EIF4A1A0A087X0R7 540 aa20.29■□□□□ 0.84
MBD1-217ENST00000588937 NLRP1Q9C000 1473 aa20.28■□□□□ 0.84
MBD1-217ENST00000588937 SALL2Q9Y467 1007 aaPredicted RBP20.28■□□□□ 0.84
MBD1-217ENST00000588937 NSD3Q9BZ95 1437 aa20.27■□□□□ 0.84
MBD1-217ENST00000588937 TULP4Q9NRJ4 1543 aa20.26■□□□□ 0.83
MBD1-217ENST00000588937 NINLQ9Y2I6 1382 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms